Array 1 17281-13652 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKHP01000003.1 Acinetobacter ursingii strain TUM15111 sequence003, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 17280 28 100.0 32 ............................ TTATGATTCACAGACTTGGACAATCAAAAAGA 17220 28 100.0 32 ............................ GCTATGTGTGCCGATGGCTACACGCGGAATAC 17160 28 100.0 32 ............................ GATTAAGATCACCAACAAAGGGGCGATTCAAG 17100 28 100.0 32 ............................ TCAATGGCTTCAATTGTTTTGGATTTCGATTG 17040 28 100.0 32 ............................ TATCGCAAAATCACCACCCAAAGTTACTTTTC 16980 28 100.0 32 ............................ TTGTTTCGCAGTTAAAGCTTTAGTCGAATCAT 16920 28 100.0 32 ............................ ACTGATGTTTTTGCCCGCATAAAATACGTGAT 16860 28 100.0 32 ............................ CCCCATTCGGATACTCAGAAGTTTGGGGAGTA 16800 28 100.0 32 ............................ AGCATCAATCAGATCAGCAGCAAGGTTTAAAA 16740 28 100.0 32 ............................ AGTTGGAAGAAAAAGCGGTTAAGGCTGCATAG 16680 28 100.0 32 ............................ TTGTTTCTTAGGCAACGGACGAACGTCATAGA 16620 28 100.0 32 ............................ CTCAACGTGTTTCGTATAACAAAAAAGAAGTT 16560 28 100.0 32 ............................ TCCAGTAGCACAGCAAGTTGATCAAAAAGACT 16500 28 100.0 32 ............................ TGGCGTGATTTTGATTCAATCAACTACTGATA 16440 28 100.0 32 ............................ AGTACCATCTGGGTTGCCATTTTTCGCAATTA 16380 28 100.0 32 ............................ CATAAGCGAAGCTTGAAAAGCGTCTTTTGCTT 16320 28 100.0 32 ............................ TGAACCATTAGAACTTGTTGATGTGCTAGTGC 16260 28 100.0 32 ............................ AATCAAACGGATTATCAGTAGTTGATTGAATC 16200 28 100.0 32 ............................ TGGTGCAGCGTGGATATGAATAGTGTATGTAT 16140 28 100.0 32 ............................ ATGAAGCGTTAATGATCGACCAATGTCCAAAA 16080 28 100.0 33 ............................ ATTTCAATGTGAAAAAGGACAAGCTCAGTCTCA 16019 28 100.0 32 ............................ ATAGGAATTTCACAGTACAAGGCAACATGGTC 15959 28 100.0 32 ............................ ACTAAAAAGGTGGATACTTGGTTGATGGATAA 15899 28 100.0 32 ............................ ATTCAATTACGTTGCCTCGAATCGTATCTGAA 15839 28 100.0 32 ............................ ATTCAATTACGTTGCCTCGAATCGTATCTGAA 15779 28 100.0 32 ............................ GTCAGTAGTAAGCGTACCCACAACGCCTGAAA 15719 28 100.0 32 ............................ TGTTCCAATCGTGGCCACTTTTCCAGAATCAT 15659 28 100.0 32 ............................ AGAATAGACCAATAGCAGAAGCACCAGTAATA 15599 28 100.0 32 ............................ GAAAATATGTTCTACCGTAGATTTGACCAAAA 15539 28 100.0 32 ............................ AGATGACGGCTGTACTCGCACTCAAAACGGTT 15479 28 100.0 32 ............................ GATTTTAAATTCGGCTTCGGGCGATAACATGA 15419 28 100.0 32 ............................ AGCTAATCATCGGGGGCAATCCAGCTTATGAA 15359 28 100.0 32 ............................ TGTGCAATTATTTTGAACGTTGGGAGTGTCGT 15299 28 100.0 32 ............................ ACGTATGGATGCTTTGGAGCAGGAATTAGTCA 15239 28 100.0 32 ............................ ATGACGTAAGAAATCATGTTATCGCCCGAAGC 15179 28 100.0 32 ............................ TGTACCAGAACCGTCACCATCGCCACTTCCTG 15119 28 100.0 32 ............................ ATCGCCACTTCCTGAACCATTTCCACCTGTAC 15059 28 100.0 32 ............................ TCCAGTACGTCAGATTTATGCAGATATTAACG 14999 28 100.0 32 ............................ TTTAAGAATAGATGTGCAGAGTTTTGACTCAT 14939 28 100.0 32 ............................ TGACCTGCTTTCCATCGATGACAGCATTTTCA 14879 28 100.0 32 ............................ TGTGTGCTTATGTGGCATAGTATCAAGCACAC 14819 28 100.0 32 ............................ GCGAAAAGGTTGATCTGGAAATGCGTAAAGCA 14759 28 100.0 32 ............................ AATAACAGCAGTTAAAATAGCGACAATACCTT 14699 28 100.0 32 ............................ GTTAATGCGCTTCCAGTCGCCTAGTTTATTTA 14639 28 100.0 32 ............................ TTTTTATAATATAGGGGTAGCGGATACGCAAC 14579 28 100.0 32 ............................ TACATACGACTTATAAAACTCAAGCATGTGAT 14519 28 100.0 32 ............................ GCCCGCTTTAGCTAACTTGACAGCAACAGGCA 14459 28 100.0 32 ............................ TAAAGCAACTTCTGAATATATGTATACAAATT 14399 28 100.0 32 ............................ TACGTGCGTAGGTGGTGATGTCTGGCGAATAT 14339 28 100.0 32 ............................ TGCTTGGGTCAGGGCAATTGCATTGAAGATGC 14279 28 100.0 32 ............................ AAATGAAATCATTAGATAATTATACAATTTAA 14219 28 96.4 32 ..........G................. AAGCAGCTATTTTTTCTCGGTCAAAGTGGAAT 14159 28 96.4 32 ..........G................. TGTAATGGCTCAGAATCATTAATCTTATATCT 14099 28 100.0 32 ............................ TACATACGACTTATAAAACTCAAGCATGTGAT 14039 28 100.0 32 ............................ GTTACTGGTGATGAATCTAGTCAAGTTGATAT 13979 28 96.4 32 ..........G................. AGAAGAATGGAACACCAGACTTATCACTTGCA 13919 28 96.4 32 ..........G................. AATAGTCTTGCTGAAAAGTTAAAGGCTGCTTT 13859 28 96.4 32 ..........G................. ATCTAATGGTGGCTGTATGAAGCAATACTTAC 13799 28 96.4 32 ..........G................. GAGAGGACAAAAAATTATTCACGCTGATTGAG 13739 28 96.4 32 ..........G................. ACTCTAAATAATTTTCTGGATTTTGCCCGAAT 13679 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 61 28 99.6 32 GTTCATGGCGACATACGCCATTTAGAAA # Left flank : TAGAGCAACTGAATCTAACTCATTGGTTAGCAAGGCTGCAAGATTATGTACATATCTTATCTGCTCGTAAAGTTCCTGAGGATAAGATCAACGGCTATGCTGCTTATTTTAAAGTTAATCCAAAATTGACAATTGAACAGCGTATTGTTCATCAGGCAGAACGCCGTGGAATCTCAATTGAAGAAGCACAGGAACACTTTAAAGCATTGGATCTGACGGAGACTTTTGAACCTTATATTAATATGAAAAGCCACACCAATGATATGAACTTCCGTTTGATTATTGGGAAAAAATGTATTGATGAAGCAAATATTGGAAAATTTGGAAGCTATGGATTAAGTCGTACATCCACAGTACCCGAGTTTTAACCCAATATTTTTTACACTCTTTAACAGCTTAATAAAATCAATAAGTTATAACTTTGCTTTAAAACTTTGGGTATTTCATACTTTTTAGGGATAAAGCACTGTTATAACTTTATTTTTTGCTTTATTCTTACT # Right flank : TGCAAACGACGAATAAGAGCTTAAGCTGATTGATTCACGAGAGTAGAATATGGAATCTAAATGATCGTAAAAATGAGTTAAAAAGGAATGATATAAACAAAAACGCACTGCTTCTGGCGAAACAGTGCGTTAGGTTAATAAGATTATGCTGGTAAGTCAAACCAGATCATTTCACTATCTTCAAGTGCATGAATCGTAGTTTTCTCATCAAACAATAAAGCATCACCTGCTTTAACAATTTGATTCTCAATCATAATTTGACCTTTAATCACATGTACATAATTGTGCTTTTGAGTTGCAGCAATCTCAAGTATTTTATCAGCTTCTAATACAGCCGCTTTCACTTCTGCATTTTGGCGAATATGCATAGCAGCATTATCATTTGGTCCTGCAATCAAGTGCCATTGGTTTGGCTGTTCACTCGGATCAAGTTTGATTTGTTGATACGTTGGTTCAGCATCGCGTACATTTGGATGAATCCAGATTTGAAACAGATGCAC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGACATACGCCATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCATGGCGACATACGCCATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.20,-6.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [63.3-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.77 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 159388-158702 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKHP01000002.1 Acinetobacter ursingii strain TUM15111 sequence002, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ================================== ================== 159387 26 100.0 34 .......................... TCAGGCATTGCACGTTCTACCCATAGTTGAGGGT 159327 26 100.0 34 .......................... TATAGCGCGAGTGAGTTTGAAATTGTTCCACAGT 159267 26 100.0 34 .......................... CAAGACAGTTTTCGCTTCTGGGGTTCGCGTACGT 159207 26 100.0 34 .......................... AACAGGAAAGGGGCGTACTTTAGTTATTGGTAGT 159147 26 100.0 34 .......................... GTATCGACTTATGCAGTTGAAAATCCTAATTCGT 159087 26 100.0 34 .......................... GTAGTAATATACAACCAAACCAATTTTGGATTGT 159027 26 100.0 34 .......................... AAAACGTGCCGTCGCTTTCAATGTGTGTCGTGGT 158967 26 100.0 34 .......................... TGTTAAAAATATCTATAGAATAATTCGATCAAGT 158907 26 100.0 34 .......................... AGCAGGAATTTCTTTTTTAAACGACTTAAATAGT 158847 26 100.0 34 .......................... AGTTCAAACGATCTTTGAACCCAAATACACAGGT 158787 26 96.2 34 ..................T....... CCGATTTTTGGCAATAAAAAAGCACCCGAAGGGC 158727 26 76.9 0 .................AT...TTTT | ========== ====== ====== ====== ========================== ================================== ================== 12 26 97.8 34 TTCCTATCGCATAGATAGCTTAGAAA # Left flank : TAAAAATTCAGCTTTTTCGCTTGGTAAAAGTTTTGCATCCAGAATCTCGGCATCTGCGGCCCATTCTAGAGAAAGCGTTTGTAAAACTAGCGCAGAGCTTTCTGCAAAATAATCTTCGGTTCCCTGACCTAAATGAGCATCGTATTGACGTAATGCAGTCACTCCAAAACGAATAAAATCACGAATTGTTGTTAAGTTTTCTGCGGCTTCCTGTAATTGTTCAGGATTAATGGTCGGTCGCTCCACTCAGGGGTCTCCAAAAGATGATGATGCAAAACGGCTTATGATACCTTGTTTTGTCTTGCTTTTTAATGCCTAAAGCGAGTGGATTCAATTTTAAATCAAGTTGACTTATTGCTCTTTTTTAATCAATATTTTTCTTACTCTTTAATAATATAATAAAATCATACGCTTATGATTTAACTTATTTTTAAAGCATAATATCAAATTATTAAAATAACTTGTTGTTATTAAATGATTTATTAATAAGAGTTTATAGT # Right flank : CGAGAATCCAAACATTTTGTTTTTAATTGCTGCATCGCTAAAGGATCCATCGGTGCAGTCATCATGGCCCGATAAGCCAAACATTCCTGCGTTTCTTCTGTTGCTTGAGATTTGGCATTCAAGCTATGGCATCCCATCAGTCCCAAAGAGAAAATACATCCTAGAATAAATTTGATGAACATTGGATTTTCTATAAATCAGTATTTGTCGATATCAACTCCAATTTTAAAACGCAAAATAGCAAATAGAAACCATTGAATAGACTTGTTTCATAAGTCCCTTTCATTTCTGCCTATGGGAGAGAAATAAAGAGGGTTTAAACAATGATGAAAGACGTCATAGTGTATAGATCTTTTAAAATTTGCTTATTTTCATAAAATCTTCTGCCAATATATAAGCATTTTAAAAAGATGAGCTTAATAAAATGACAAATCCAGATATTCAAAGTGTAGAACTCACAAAAGCCTATCGTTTACTTAATCATGGCCCAACTGTACTGG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCCTATCGCATAGATAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: R [matched TTCCTATCGCATAGATAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.70,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-88.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //