Array 1 895466-897479 **** Predicted by CRISPRDetect 2.4 *** >NZ_LS991952.1 Mycoplasma gallisepticum strain NCTC10115 chromosome 1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 895466 36 100.0 30 .................................... TAAACCGTTATGTTTTCTCAAAATTGTACA 895532 36 100.0 30 .................................... AAAATAATGGAAAATTTAGGGATTAAACAT 895598 36 100.0 30 .................................... GTCAGTTAAATTTCTTAAATCTTCTAGTTC 895664 36 100.0 30 .................................... ATAATGTAGGTTGTTATAGTATTCGTGGTT 895730 36 100.0 31 .................................... TTTCTTTTAAATATTCTTTAATATTTCCGTG 895797 36 100.0 30 .................................... TAAAATAATGGAAAATTTAGGAATCAAACA 895863 36 100.0 30 .................................... TTAGACTTTCGCGACGATCTGATTAACGGT 895929 36 100.0 30 .................................... ATTTTTGATTTCAAGAAACTAATATCACGC 895995 36 97.2 29 ...................................T GTCTTAATTCAAGACGAATTAGCTTATTT 896060 36 100.0 30 .................................... TTGAACACAATTGGCAACTTTAAGTTTATT 896126 36 100.0 30 .................................... TGCTTATCTTGAGCGATATTTTGATAAGGA 896192 36 100.0 30 .................................... CGTTTTGATAGAAATCTTGATCAAATATTG 896258 36 100.0 30 .................................... TTAAAAAGTGAATTTTGATCTCCGTTTTTT 896324 36 100.0 30 .................................... TCATTAAAACGAGAATATTTAGTTCATAAA 896390 36 100.0 30 .................................... AACTCTATTTAGTAGTAATTATAACAGAAT 896456 36 100.0 30 .................................... GTTATTTTTCAATAAACTAATCTATTGTAT 896522 36 100.0 30 .................................... AACTCTATTTAGTAGTAATTATAACAGAAT 896588 36 100.0 30 .................................... GTTATTTTTCAATAAACTAATCTATTGTAT 896654 36 100.0 30 .................................... AGTTAATAAGTAACTCATCTATACCACAAA 896720 36 100.0 29 .................................... TTTCATTCGATTTTTTTGATGTTTTCGGG 896785 36 100.0 30 .................................... TTTAGAGTCTACTAACTCTGCTTTTGATCT 896851 36 100.0 30 .................................... TTTGAAACTAACTTATTTGTGTCGATGTTA 896917 36 100.0 30 .................................... TTTGCGTGATAATTATGTTGGTATTGAAAA 896983 36 100.0 30 .................................... GGTGATCTACCAAACGAACTCAAACCCATT 897049 36 100.0 29 .................................... GTCTTGGTTATACTAATAACCCGGATTTT 897114 36 100.0 30 .................................... CAACACAAACAACTTTCAGCTTATAACATT 897180 36 100.0 30 .................................... CGATTTACCAAACGAACTCAAACCTATCGA 897246 36 100.0 30 .................................... AAGAAAAACTTGATACCCGTATAGTTATTT 897312 36 100.0 30 .................................... CTATTATTATCTAAGTATTTTTTATATTGT 897378 36 100.0 30 .................................... AAATTAAACGATGAATTATCTCAATCAATT 897444 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 31 36 99.9 30 GTTTTAGCACTGTACAATACTTGTGTAAGCAATAAC # Left flank : TTGATAAAGAAGTCGTTGCTAAACTTAATGAAACCTTAGGTCGTGATATTATCTCGTTAGATACTTCTTACTCTAAGATTCTGAAATCAATAATCAAGATTTCAGAAGATTATATCGATCATGAATTTATCTATTCATATTTAGAGTTATTACATTGATCAAAAGAAGTTAAAACAGTTATTCTTAAAGACTTTGATAATATCGATCTAAAAAGGTTAAGTAACTTAACTCAAACTACTAATTTAATTATTATGAAGAATGATATTATCTATGATCTTGAAAAACATTTTGAGTTTTTTGAGACATACTGTTTAATTGATCATAATTATGAAAATATGATTAAGATTGATAATATGTCTTCTTTTGAATATTTATTAGAAGATATTTTTAAAGTTATGGTTGATGAAGAGTTTAAGGCCAATATGTCTTTTCATCAGCTAGAACTAGTTAAAAAGGAGTTAAAAAAGCAGATTAATTAGCTTATTTTATTTGACAATGAG # Right flank : CAAAAACAAGTATTTTTTATAAACGAAAAAGTTTTATCATTAAACATATTTAATCTGAAACAAAATTTTGAAATAAATAAACTATTACTTAATCTTTTGTTTCATATTAAACAACATAATTCCAGTTGCTACTGAGACGTTTAAGGACTGTATCTTATCAGTATACATCGGGATCTTGATCTGATAATCAGCATTCTTAATTAGTTGACTAGAAACTCCTTTTTGTTCGTTTCCAACAATTAAGATTGATTTATTAGCATAATCAACATTATAATCTTGAGCTTGATCACTTAAATTAGAGACATAAGATCAAAAGTCATACTTATCTTGTAGATCTTTGATCGCATAAGATAAGTTGGCAACCTCAATTAGATTAAGATAAAAACATGCACCTAGTGATGTTTTTATCACCGTGTTATTAATACTTGCTTGGTTGTCTTTTTTAAAGATGACCCCAAGCACATTTGCTGCCAAACAACTCCGTAAGATCCCACCAAAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGCACTGTACAATACTTGTGTAAGCAATAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGCACTGTACAATACTTGTGTAAGCAATAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-83.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //