Array 1 99155-99316 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABBDC010000007.1 Bacillus pumilus strain C2-2 contig7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 99155 32 100.0 32 ................................ GCGATAATGGCTTTTTTCGACCATTTTTCTGT 99219 32 100.0 34 ................................ TAATTTTCCATCCTCAATACTAGACTCTAATTTT 99285 32 87.5 0 ...................TA........GG. | ========== ====== ====== ====== ================================ ================================== ================== 3 32 95.8 34 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : ATACTAGACTCTAATTTTGTCGCACTCTATATGAGTGTATGGATTGAGGTAGCTTGAAAGAAATGTTGACAGTTGCGCTTGATTTAGGTGTTAAAAACATGACTCTGGCCCAGTAGTCATGTTTTTAAATGAATTCAAAGCTGTTGATGAAACAGTAAAATAAGTATGTTTTCAAGAGCAATAGTTTTTAATTAAATAGGATTAATAAAAATTTGGTGCAAATGTGAGGTGAACATAAAAACCCCGGGACATTCGCACCTTTTTATTCGACAAAAATGAGAAAAAATGAATATTATTTAGAGGTGAAAACAGAATTCCATATAGAAAACTGAGGGTTTTGGCTAGTGAACATAAAATCCCTGGTGCATTCGCACCTTTTTATTCGACAAAAATGAGAAAAAATGTATATTATTTAGAGGTGAAAACAAAATTCCATATAGAAAATTGAGGGTTTCGGCTATCATTCCCTAAAAAATGTTATAATTAGGGTAGAAATCGCA # Right flank : TAGCTTGAAAGAAATGTTGACAGTTGCGCTTGATTTAGGGGTGAAAAATATGACTCTGGCTCAGTAGTCATGTTTTTAAATGAATTCAAAACTGTTGATGAAATAATGAATAAGTACCTTTAGAGCAATAGTATTTAATTAAATAGGAATAAGAAAAATTTGGTGCGAATGTGAGGTGAACATAAAATCCTCGGGACATTCGCACCTTTTTATTCGACAAAAATGAGAAAAAATGTATATTATTTAGAGGTGAAAACAAAATTCCATATAGAAAATTGAGGGTTTTGGCTATCATTCCCTAAAAAATGTTATAATTAAGGCAGAAATCGCAGTCGCACTCTACATGAGTGCGTGGATTGAAATATTTCATTTTCAAGCTTCACCCAATGGCAGCCGCGGTCGCACTCTACATGAGTGTATGGATTGAGGTAGCTTGAAAGAAATGTTGACAGTTGCGCTTGATTTAGGTGTTAAAAACATGACTCTGGCCCAGTAGTCAT # Questionable array : NO Score: 8.15 # Score Detail : 1:0, 2:3, 3:3, 4:0.79, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 101038-101266 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABBDC010000007.1 Bacillus pumilus strain C2-2 contig7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 101038 32 100.0 33 ................................ TTCGGTTTGTAACTATATTTCGCACCTCTTACA 101103 32 96.9 34 ................A............... CAAACTGATCTATCTTACGAGCATAAACAGTTTT 101169 32 93.8 34 ...A.......T.................... TGGAATCTCAATAAGCACGCTACGGTGGTATTTT 101235 32 87.5 0 .....................C.AT..T.... | ========== ====== ====== ====== ================================ ================================== ================== 4 32 94.5 34 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : AATTAGGGCGAAAATCGCAGTCACACTCTACATGAGTGTGTGGATTAAAATTTGTGTCTGTTTTTTGGTTAACTTCTCACCAGGAGTCGTGCTCTACATGAGTGCTTAGCTATTCTTGGTTTTAATAAGAGAAAACAAAAGCATTTATGTTTGATTCGAAAATTATTAGTGGAGTAACTATACTGATTAAAGTTTACTTTTCTTCAGAGATTGGGAGAAGAGTAGTCATTTTAGTTAATAAAGAAAATTGAAGACAATAAAATGAATTAGAATAGCTCTCCTCGGATATGTTAGAAGAACATTAAATCAAGATTAATGAATTAAAAACTTGGTGCGAATGTGAGGTGAACATAAAATCCCTGGGACATTCGCACCTATTCATTCGACACAAATGAGAAAAAATGTATATTTCATGAAGGGGAAAACAAAATTCTTTATTGAAAGTTGAGGATTTTGACTATCATTTCCTAAAAAATGTTACAATTAGGGCGAAAATCGCA # Right flank : TGATTGTCTCTTAAACTGGTATGGCCACCTCAAATCCATCTTCTTACAACATCCTCTTTCAAATAGCCATCAAATATACTGTTCATTTGTATAGTGAAAACATGACTCTTTGCAGTCATGTTTTTTTCTTCTTCTTTTTCCTAAATAAACCTTAAAAAATCTCAAAATAAGTCGAAATGAAAAGTAGTTATTTAGATTCAAATTTTATCCATTCGTAATGAATGATGAAGGAGGAATTGGTTTGGGTGAAACGAAGCAAACCGGTAAAGTTGAGCAGCTGATCTTAGAAAATTATCAAAGATTAAACAGCATGATATCAGAAGAAGTGGACTTTGCTTCTAATCATGGCGGACTGACAGGAGATTCTAGAGAAGTGATGTGGATGGAGTTTTTTCGGAAAATCATTCCTAAAAAATATTCATTAGCACAAGGTGTCATCATTATTGACTCAGATGGAAATCATTCTAACGAAGTCGATATTGCCGTTTTTGATGAGCAGT # Questionable array : NO Score: 6.77 # Score Detail : 1:0, 2:3, 3:3, 4:0.72, 5:-1.5, 6:0.25, 7:0.01, 8:0.6, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 108914-109278 **** Predicted by CRISPRDetect 2.4 *** >NZ_JABBDC010000007.1 Bacillus pumilus strain C2-2 contig7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 108914 32 100.0 35 ................................ CTACCGCTATTTGCAATGTCCGTAAAGGCGTATGG 108981 32 93.8 34 .............CT................. CTTCTCTGCTTTTGGGGTGTATTTAAAAGTTGTA 109047 32 100.0 35 ................................ ATTTTTTCGAACACCTCGTCTAGCGTTGCCTTTGG 109114 32 93.8 36 ...........C......A............. ACATAATATTGACCGCTGTTTTTCACAATGGATAAT 109182 32 93.8 34 ...........C...................G TATGTATTCAATTGACTAATGCTCAATGTTTGAA 109248 31 81.2 0 ...........C.......TA......-..GG | ========== ====== ====== ====== ================================ ==================================== ================== 6 32 93.8 35 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : GCCTGAGACAGTAAAGGGAGCATTCAAAGTAGATGTGATGACACCACATCATTCAGACTACAACAGCGTCAAGCTAGATAAGATGAACAAAGGGGGAAGTGTTCCAGCCCCTCGAGACGATGACTCACCAACACCGATTCATTTCTTAACGGTGGTCAACGGCCGCTTTCAACTTCTATTAAAAACAAAAAAGAATCTACCAGAAGATGCGGAATGGCTCGAACTCGCCAAAACCATCTTACTAGGAGCTTTAGAACACGAAGGAATCGGTGCTAAAACAAATGCAGGTTATGGAAGACTTAAAATGGACGACGTCATTTCATAAGACTAAGTGCGAATGTGAGGTGAACATAAAATCCCTGGAACATTCGCACCGTTTTATTCGAAAAAAATGAGAAAAAATGTATATTTTTTAGGTGTGAAAACAAACTTCTATATAGAAACTTAAGGGTTTTGACGATTATTCCCTAAAAAATGTTATAATTAGGGCGAAAATCGCA # Right flank : GTAGCTTGAAAAAAATGTTGACAGTTGCGCTTGATTTAGGGGTGAAAAACATGACTCTAGCTCAGTAGTCATGTTTTTAAATGAATTCAAAATTGTTGATGAAATAATGAAATAAGTACCTTTAGAGCAATAGTTTCTAATTAAATAGGATAATAAAAATTTGGTGCGAATGTGAGGTGAACATAAAATCCCTGGAACATTCGCACCTATTCATTCGACAAAAATGAGAAAAAATGTTATAATTAGGGCGAAAATCGCAGTCGCACTCTATATGAGTATGAGGTATAAAATTCTTATCAGAAGGTAGCTTGAAAGATATATTGACAATTGCGCTTGATATAGGTGTGAAAAACATAACTCTGTCTCAGCCATTTTATTAATGAATTCAAAGCTGTTGATGAAACAGCGAAATAAGTATGATTATCATCAGTAATAGTTTTTTTAAATAGGATTAAGAAAGATTCGTGCGAATGTGAGGTGAACATAAAATCCCTGAGGCA # Questionable array : NO Score: 8.64 # Score Detail : 1:0, 2:3, 3:3, 4:0.69, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.84%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //