Array 1 195861-195363 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAASIS010000002.1 Enterococcus durans strain K38 scaf_2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 195860 36 100.0 30 .................................... TAAGTACCTTATGCCTGCATGTGGACTAAG 195794 36 100.0 30 .................................... TGTTGTTGATAAGAATTATTTTGATCCATT 195728 36 100.0 30 .................................... CTGTTTGTGATTATTTATTAAATTATAGTA 195662 36 100.0 30 .................................... TTTGTGGTACTGAATATGTCAGTTTGCTAA 195596 36 100.0 30 .................................... AATTTATGACGCTGATATGGAATTGCAAGC 195530 36 100.0 30 .................................... CCACATTCAAAATTAAGAGAAGTAAAACGT 195464 36 100.0 30 .................................... TATTGTCATGGCTGGCGCGAATGGCGGTTT 195398 36 91.7 0 ..........................T......GT. | ========== ====== ====== ====== ==================================== ============================== ================== 8 36 99.0 30 GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC # Left flank : GAAGTAAAGCGAAAGATCATGGTAAAGGAAACCAAATCGAAGGACGTATTTTTGAAGGGCAAAAAATGGTCGTAATCGAAGATCTGATTTCCACTGGCGGAAGTGTACTAGAAGCAGCAGAAGCTGCTAAACGTGAAGGGGCGAATGTTTTAGGTGTGGCTGCTATCTTCACGTATGAATTACCAAAAGGAAAAGCAAACTTTGCTAATGCGGAAATGCCATTATTGACCCTTACGAATTATTCCGTGCTGATTGAAGCAGCACTTGAAGAAAAATACATTGATGAAACAGAATTAAACCTATTGAAGGAATGGAAACAAGATCCTGAAAACTGGAAGAAAAACTGATTGCTTAATATCTGTAAAAAATATTTTAGCCTCAGAAATAAAATGGTATACTAGTGTTGAATAAACAACAAATAAAGAAGTATTCAAGACGAAAGTTTTGCTATGGACGAGTAGCTCGGTGATAAATCACGTAGAAAAAATTTTTTCTACGAG # Right flank : AGCAACTGTTTTTGGGTAGTGTTATTTGAAAATACGATATACGAGTGGTAGAGACTAGAATGCTTTCTTCTGGTTTCTATTTTTTTATATAAATTGGGGATGATTTTGTTAAAATTATAAAAAAATCAATGAAAATAAAACGTGTTATTTGCAAATTTTAGTTATTTAATGGTAGGATTATCGGAAAAAGTATTCCATTAAGGGAGGTCTATTTATGGGATTGAATGAATTTATTTTGGGATTGAACAACTTAGAAAAAATCACTCGGGCTCCTGGTTTCTTTAAATTCACCGAGCATACGGTAGCGGCACACTCGTATCGAGTGGCTTCGATTGCTCAAGTTTTAGGGGATATCGAAGAAGTAAATGGTCAAAAGATCGACTGGAAACTGCTCTATGAAAAGGCACTGAACCATGATTATACCGAGCGCTTCATTGGTGACATCAAAACTCCAGTAAAATATGCAAGTAAAGAGTTGCGGGGGATGTTGCAAACGGTAG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.80,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 1 71877-72176 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAASIS010000004.1 Enterococcus durans strain K38 scaf_4, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 71877 36 100.0 30 .................................... TCATATGATTAATCTCCTTTATGATATTGT 71943 36 100.0 30 .................................... ATTTAGAAAAAAAATAATTAATCGAGATCA 72009 36 100.0 30 .................................... AAATGGTTAGTGAAATCATTGAACTAACAA 72075 36 100.0 30 .................................... AGCAAGCATTAGATATTAGTAAGCAAGCTA 72141 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 5 36 100.0 30 GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC # Left flank : GTTGAAGTAAAATCCATGATCGACAAATTGACCACTACGATCAGCGAATTGATCGACTACGAGCTATTGGATCATGAATTGGATTTGGAAAGTGATGAAATCACGGTATTAGAGCTGTTTAAAGCACTTGGTGTAAAAATTGAAACGCACAGTGATACCATCTTTGAGAAAATATTGGAGATATTGCAAGTATACAAATATCTATCTAAAAAGAAATTACTAGTTTTCGTCAATACATGCGCTTATTTTACGTTAAAGGAGCTATTGGAGATACAAAATTACATCTCTTTGTACAACATGGATGTTTTATTTCTTGAACCACGTAAAATTGAGGGAGTCCCTCAAAAGGTTTTAGATAAAGACTATTTTTTGACATAAAAACTATGCTAAAATGAACTTAAGAACGAATGACTTGAAGCAGTCATTCAGCATTCAAGACGAAAGTTTTGCTATGGACGAGTAGTTCGGTGATAAATCACGTAGAAAAAATTTTCTGCGAG # Right flank : CAGAGCTAGGATTGATTGCTACAGTGGGTGTGTTTTAGAGCTATGTTATTTGAATGTCTAGAGGATGAAGAATAGATGACCGAGGGGTTGTTTATTCTTTTTTTCATATAATTGGACGGCGATGCTTTCTGTTAGTAACATAAAGGAGAAGGGTGGTTGGGGATATGTTTGATTCAACGTTGATGGTTTGCTTAGATTGGCTGATGACGATTTTAAATCTTGCTTCGATCATTATTTTAGTGGTCGGTGTTTTTTTAGTATTAAAAACGTTGTTTGATTGGCGGACTTTGAAGAAAGATTATGGACAGCGAAATAGTCGCAATGCAGAGATTCGCAAATTGTTGGCTAGTTATATTTTATTAAGTTTAGAAGTTTTAGTGGTGGCAGATATCATTGAATCTGTCATCAAACCAACTTGGACAGATATTTTAAAACTTGCTTTGATTATTTTGATCCGTACGATCATTTCGTATTTCTTGAATTTAGAGATTAAAGAACAA # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.42%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGTTGTTTTGAATGCTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.50,-1.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //