Array 1 36420-32974 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJNUN010000006.1 Lactobacillus delbrueckii subsp. lactis strain FAM 22680 FAM22680-i1-1_scf6, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 36419 28 100.0 33 ............................ GCTTTGTCTTGAGCGCAGCCGAAGATGGGCAGG 36358 28 100.0 33 ............................ TCATCATCACGACCAATCTGTCGGAACAAGAGA 36297 28 100.0 33 ............................ TCATCGTTAATCCTCCTTCATGTTCTCCTAGTC 36236 28 100.0 33 ............................ TCATTGACTACCTGAACAAGAAGACAGGCAGCC 36175 28 100.0 33 ............................ CATCAGCCAAAAGCGGATGCTTTGGTTGGACTG 36114 28 100.0 33 ............................ TTACTGGGGCGACGCTATCTTCCTTGCTTTCAG 36053 28 100.0 33 ............................ TTTTAAGTATCCTGGCGTTAAGGTGCCGATTGA 35992 28 100.0 33 ............................ TGCGTACTTTGTAGCATAGCTTGAAGCAGTGCC 35931 28 100.0 33 ............................ CCCATAAAAGGCCACAGGCCAGGGCAGCGTAAA 35870 28 100.0 33 ............................ CCCCAAGGCTAGTGCTCAGCTTTTAAACGCCAA 35809 28 100.0 33 ............................ TTGTGTTCTGTCCCAAGCCGACACCACCATAGA 35748 28 100.0 33 ............................ TATATTCGGCTTGGCAACGCCACTCAAGCCGCT 35687 28 100.0 33 ............................ TGCGCAACTGACTACATCATGAGTGATGTAGAG 35626 28 100.0 33 ............................ TATCAAGGCTTAGGCTTTTGTTGCATGGAATGC 35565 28 100.0 33 ............................ AAACGCCTTGAAATTGGTTGAGCGCAAATTAGA 35504 28 100.0 33 ............................ TACTAACATTTTACCGGCGGTAATACAAGCATT 35443 28 100.0 33 ............................ TTCACTGGGCATACCAAGAAAACGGTTCATACA 35382 28 100.0 33 ............................ CTTTGCATTGTTCACCCTCATAAACTTTTCCAG 35321 28 100.0 33 ............................ TGGCTTTAGCCAGGGGAGTTAAAATTTTTTGCT 35260 28 100.0 33 ............................ TAGGCCACTAAAAAAAGCACGCTTTTGAACGTG 35199 28 100.0 33 ............................ CTATAGCTAGACCATGCAAGCAGGCTTGCTCTA 35138 28 100.0 33 ............................ TCTCAAGAATAAAAGTAGAGAAGCTGGAATAGA 35077 28 100.0 33 ............................ TACGTAACTAAAGAAATTGGCGACTTTATTTGG 35016 28 100.0 33 ............................ TACCCAGCATTGATGGCAGCCTGTGTTGAGTTG 34955 28 100.0 33 ............................ CTGAAAGACGAGATGATACCGTGTTTGCTTCTT 34894 28 100.0 33 ............................ TGAACAGCTGGTTCCTTGACTTCCCAGATTCCA 34833 28 100.0 33 ............................ AGAAGCATATCATGATCAGCTTTAACAGTCACG 34772 28 100.0 34 ............................ TACAAGGCAGACTCCCAAGTATGGAGCTATTTGA 34710 28 100.0 33 ............................ AAATTCTCTTGCTTCCATTTTTAAGCTCCTTTA 34649 28 100.0 33 ............................ CTCTATGTTTTAGGTGCTGTATCATCATTGGGT 34588 28 100.0 33 ............................ TCAACCGCTGCCTAACAATTACTATGGCAAGCC 34527 28 100.0 33 ............................ TTTCCGTTTGTGATACATCGAAAACACAGACCG 34466 28 100.0 33 ............................ TTGGCCTGACTGGTGCTATGTTCCAATCAACCG 34405 28 100.0 33 ............................ TTTCGACTTCTAAGGAGTCATGCAAGTAATCAA 34344 28 100.0 33 ............................ CGCTATTGCAGTGCACATTGACCTTACCAGATC 34283 28 100.0 33 ............................ TAAGCAATATTATGTTTGGTATCTAACAATTGA 34222 28 100.0 34 ............................ CCGGTGGCTCGTGGTCACAGCCATGTTTGAGGAG 34160 28 100.0 33 ............................ TTGATCTAAAAACCCCGAAAAAGACTGATCTAA 34099 28 100.0 33 ............................ TTTATTGCATAGCCTTTTCTGCCAGTTCACGCA 34038 28 100.0 33 ............................ TAAGTGCCAACGTCAAGAAAAATCAAGCCGTCA 33977 28 100.0 33 ............................ TCATGTGGGGATGTGGCAATATGCAGACAACTG 33916 28 100.0 33 ............................ TAGCATGAAGGCTAAGGGAGCTAAGTTTGTCCT 33855 28 100.0 33 ............................ TGGGACTGACACTACCGTTGGCGCTTATGTTGG 33794 28 100.0 33 ............................ TGCCGAAGAGCTTGCAGTTTGCGCCGCTGAGTG 33733 28 100.0 33 ............................ TACTCTAAGGCCGCCGACGCCTATGCTAGCGAG 33672 28 100.0 33 ............................ CTTGTTCAGTTGCCCGCTAGTAATGACGGCTTG 33611 28 100.0 33 ............................ TCAAGGCTGGCCATTTCGACGACTTGTTCATCG 33550 28 100.0 33 ............................ CAGTATAATAAAGATAGTTAAAGAAAAAAGTTA 33489 28 100.0 33 ............................ CGGGCGAAAATAGGCCGGGGGAAAATACATATA 33428 28 100.0 33 ............................ CATAGCCGTTATAATATTCCATTTGTTATATTT 33367 28 100.0 33 ............................ TGACTGCATCCGAACGTCGTTGTAGGTTCGCAA 33306 28 100.0 33 ............................ TAAAGGTCTTCAGTCCCCGGTTGATCAAAGCGA 33245 28 100.0 33 ............................ TGAACAGTTCAAATTTGCGGATACTACAACCAA 33184 28 100.0 33 ............................ TTTGGCATACAAGCGAAACTTTGCTGGCTTCAG 33123 28 100.0 33 ............................ TCATGTGGTTAAAGGAAATTTGGGGCTCTGATA 33062 28 100.0 33 ............................ TAGCTCGTCTTGAACAGCATTTAGTAAATCGCG 33001 28 85.7 0 ............T.T.......CA.... | ========== ====== ====== ====== ============================ ================================== ================== 57 28 99.7 33 GTATTCCCCACGCAAGTGGGGGTGATCC # Left flank : GGATTGAATACGGAAAGTGATCAGATTTTGTCTATTGGCGCGGTGAAACACGATGGTACAGAATTCTACCGACTGATCAAGCAAGATATTGATGTGCCAAAACAGATAGTGGAGCTGACCGGGATAACTCCAGCAATGCTGGATAAGGAAGGCGTTCCACTGCAAGATGTTTTGGGAGAACTAACTGACTTTGTTGGGGATGTGCCAATCGTTGGGTATAATTTTAGATTCGATTCTGCATTTTTGAATAGGGAATATCGGAAATGCGGGATGCAAGAATTAAAAAATGAGATCAAGGATTTGCTGCCAGTTGTAAAAAGAAAAGAAAAATTTCTGGACAACTATAAGCTACAGACTGTATTATCAAACTACGGGATCGAAAACAAGGTGCCGCATAATGCTGTGTCTGACGCAAGGGCTACGAAGGAGCTGGCGATGAAACTAATCAAAAATCGCATTTTGGTGATTTGAGAATGGCGTCGCTAAAGGGATCCATTACT # Right flank : GTTCTTTATGTTATTGTGCTTTTCGTACTGTGTATTTTCCATACATATGCCGCGATGATCATAAGTTTCAGTTAAAGCACAAGCAAATTTCAAGGATCTTTGGTAGAGTAGAGGTAATAGGGAAGGAGTGAGGAACAAGCGTGAGCATTTACGGAAAGTATGCCGACTATCTTCCACAGATCCTGGATTCTGTTTTGCAGCAAATCCAAGGCATCGGTCAGGAGTATAGTGCAAAACACGGGCAAAAGCTATATGGGCACCTGGAAGGTCGCGTCAAAGGAGAAGAAAGCATGACGCAAAAGTGCGAGAGAAAAGGTATGCCGCTGACGCCAGAGTCTGCATTGATCGAAAATCGAGATGCGATCGGCCTCAGAATCGTCTGCAACTTTATTGACGATATCTACACTTGCATTGACTTGTTGAAGAAGCAGGACAACTTCAAGATCATTAATGAAAAAGACTACATTACCGATGCCAAGCCAAACGGCTACCGGTCATAC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTATTCCCCACGCAAGTGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTATTCCCCACGCAAGTGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.70,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //