Array 1 3774-3386 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVFR010000232.1 Nostoc sp. CHAB 5715 NODE_232_length_8489_cov_13.704257, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =================================== ================== 3773 37 91.9 35 ........TC.........T................. AAGGCATTTTTCTAAAAAAATCACAGCTAACGGAG 3701 37 100.0 31 ..................................... ATGAAAAACTGAAAGTAAGGCATTGGGGATT 3633 37 97.3 33 G.................................... GAACAGATGCAGAATTTAGATAATGACACTGCA 3563 37 89.2 33 ........T..T.A..........C............ TGTTGGGACGTATAGAGCAATCGCGCTTCTGGC 3493 37 94.6 34 ........T....A....................... GCTAAATCCGAGAGTATTCGGCTTTGGTATTACT 3422 37 83.8 0 ...............................AATGTG | ========== ====== ====== ====== ===================================== =================================== ================== 6 37 92.8 33 ATTGCAATCAACCTAAATCCCTATTAGGGATTGAAAC # Left flank : ATACTGTAGCGACTGGAGACAGCGATCGCCTAGCAATTACTAACCAAGCACTCAGAGATTTATCAGGCTGTAATGGTTTGCTGGTACGCGATTGGATTGAAGCCCATAAGGATGAAGTGATTAGCCATAATGCTAAGTTCGGCATGGAAAACAAGAAAGACCCCAGTAACCCTGCCAGCTATGCCAATAAAGGTAAAGACACAGATAAAATCCTGTTGCTGATAAACGACGAATTCTTGAGCGGTGAAGCCTTTAAAGCAGGGAGAAACTAAAACGGTGTTATTGGTCTGAATGCAATACTCTAGAAGCTTTTTGGTGGATGTCGGGAAACAGGTATTTCCCGACATTTCCCAGAGTCAAAGCATTACTAAATCATCCGTGCACTTTATGTAAACTGCCTTTCAGCGATTTACATCTAGTCAAATGACTAACCGCCGTGTTATGATTTTTGCATTCGCACTATTGAACCTTGAAAACCAAATACAGTAAAGCTTTCAGCG # Right flank : CGTCAATTTCTAGCTTTTTATCAATGTCCATCTCTACACCATTACTAGCCACTGGTGACAGCATAGCCAAGCTTGCAGCCGCTCCTAATACCTGTTCGTCAGTCACTTCTAAATATCTCTGCAACTGTTCCAAGTTCCGATGCCCTGATATCTCCTGAATAACTCTCAGTGGTATTCGAGCATTACTCATCTGAGTTAAACCAGTCCTTCTAAAGCTATGGGTACTCACGCCAATTATCCCAGCTTGTTTACAGGCAGTGCGTAGTATTCTAGCGGCTGAATCTTCGCTGATGTGTCTATCACAGCGACCGGGAAACAGATAATCATCTCCTGCCAATGGGTAATAATTGCTTAGTATTTGGCGTAAATCTTCAATCACTGGGATTGATCTGGTTGCAAGTTTTCCCTTGGTGTTTGCTTTCCTGATAATCAGCCGGGGTCTAACATTGCCCTTGGGTGTGTAAATGTCTTGAGTCAACAGAGTACAGCATTCACGGATT # Questionable array : NO Score: 6.81 # Score Detail : 1:0, 2:3, 3:3, 4:0.64, 5:-1.5, 6:0.25, 7:0.01, 8:1, 9:0.41, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATCAACCTAAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [60.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 1 8233-8388 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVFR010000236.1 Nostoc sp. CHAB 5715 NODE_236_length_8417_cov_13.102413, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ================================= ================== 8233 30 100.0 33 .............................. CACTTAAACGTGAAAGCGGAAGTTGCTACTGTT 8296 30 96.7 33 ......................A....... CACTGAAACGTGAAGGCGGAAGTTGCTGCAAGG 8359 30 93.3 0 .....G.............G.......... | ========== ====== ====== ====== ============================== ================================= ================== 3 30 96.7 34 AAGGCAGAAGCTGCTACAGACTGCGCGAAA # Left flank : TGAGTTGGACGTTCATCTAACGCAGATGTGCCTTGAGCAGAAATTTGTCCTCCCAGCCAGTCAGTAATTTCCGTGAGGCAAACCGTTCGTCCTGCTAGTAAAGCCTCGTAAGCTGTGGCGACACCAGAAAGTCCACCACCCACAACTAAAATCTCGCAATTAAGACTTTTATCTGGGGTTCTCGGTACTGTGGCGTTCGCCTTTGGCGTTGGCGCAGCCATCGCACCATCAAATGCAACTAAACTAGATATTAAGTTGAGACTGATCAGCGATGTCAAACTATAAGCTACTTTGTGTCTGCCCTTCATGGTTAAAGAAACCCCTTCAACTTCTGTTCCATTTTGTAGACGGTAGCATCTAGCAAATGTTTAACTCAAGCAATTCTTCACAAGATAAGGGAGCATCCCTGTTTTTATTTAGCTAGCAAAGATTAATCCTTGTGGGGTGGGCCGAAATGCCTGCCCTAATTATGCAAGTTCAATGTGGAACAGCTTATCTTC # Right flank : GTTGTTATAGGGAAGATAAACAGAGAAAT # Questionable array : NO Score: 2.51 # Score Detail : 1:0, 2:0, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AAGGCAGAAGCTGCTACAGACTGCGCGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.27%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.40,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-18.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 1 335-957 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAIVFR010000472.1 Nostoc sp. CHAB 5715 NODE_472_length_5658_cov_9.933104, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== =========================================== ================== 335 37 100.0 35 ..................................... GGAGCAACTGGGCGTTCGCTTCAAATCTACGGGGC 407 37 100.0 36 ..................................... AAATCGGAGTGTATTGTTAAGAGCTTGCTGGTAGCG 480 37 100.0 35 ..................................... CAAAACGATTTATGCCCAATCTCTCAAGAAGAAGA 552 37 100.0 43 ..................................... CACAAATTCCCTGGCGGCGTGACACAGTTGCAGTTCTACACCC 632 37 100.0 34 ..................................... GTCTACTCTGTAGCTATCTGGACGCCAGTTGCTT 703 37 100.0 37 ..................................... ATTGTGGCAGCAAATTCTTGGAAGCTGCCCCGGAAAT 777 37 100.0 35 ..................................... ATTTCATCAGTTCTATCAGTCGGCGCTTCTTGCCC 849 37 100.0 35 ..................................... AAAAGTCGGGTTGATTGGTATGAAGGTAGAGCCTA 921 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== =========================================== ================== 9 37 100.0 36 GTTTCAGTCCCCGTGAGGGGATTTGGTTAATGGAAAC # Left flank : GTGCAAGGACGTATCCTGATTTACTCAAGGCATTGGATGTGGCATTCGCAGAAGTGACTACAGAGAATTTACTCGGTTGGTTTACTCACTGCTGCTACTGTACTTCGGAAGACTGATAACCGCTATAAGCATCAACAACTTTCTGACGCAAGTCGAGAGAGTAGGCTTTCATAGCGACCAGTTATCAGTAGAATTGTTCTCTCCTAAGTGTACTGAACTGGACTGATAACCGCTATACTCTGCTGAATAAAAGTACGAACGTTGTTTAAGTTTTTACTGACCTTGATCTGTGGAAACCGTCTTTGTGTCCTTGGAGGTGATTGAGTTCAGAAATG # Right flank : CCGCTCGGTGCTGAAACTGTTACAGAGCAGCCTTCCTGGGAAGCATTTTGGCAAACCTCAAAAATAGGTCGATTTTAGCCGCTCTTATTGCGACTAATTCTCAACTGTCCTTAGCACTGAAACTGTGAAACTATTTACTTGTCAAGGTTCTGGCGATTTTGGCAGAACCCCAGGGTTTTTGACCCCGCTTCAACTTGCCAAACATCAAATTGATTCCATAATCATAAGATGTGTATTTATTATTGTCTATGAGTTTGTGGAGATTTAATCTCCAAACCCATATTCTCGCTCAATCAAACCCAACAACTTATCCTCGACAGCCGTCAAATACGGTCGCTTCAACTCCCCCAAGTGCTTCAGCACAGCACGGGCAGCCTCTTCTAAATTCTCGTTTTCCCGTAACCTACTGATGCGATCGCTAATCTGCTGCATCTGCTGACATTCCGACTCCAGGTAGTTCAATGGTTTCAGGTGGTCAATTCTGACGGTGTACTCCCCAT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGTCCCCGTGAGGGGATTTGGTTAATGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.00,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //