Array 1 781590-783058 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP084222.1 Arsenophonus endosymbiont of Apis mellifera strain ArsBeeUS chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 781590 28 100.0 32 ............................ TTATCACCGAAAATAGAGAAAAGAGTTTTAAT 781650 28 100.0 32 ............................ ATGTTCTGCGCAGCATTTAAAAAAGCCATAAA 781710 28 100.0 32 ............................ ATCTTCATAACAACATTCAAAATCGCAAATGC 781770 28 100.0 32 ............................ TATAAATCAGAGTATGCAGAACAAGCGCGTAA 781830 28 100.0 32 ............................ AAGCCCAAGTCTTGTTTCATCATTGAGTAAAT 781890 28 100.0 32 ............................ TTCTGTAAATCACTACTGGTATCACGCAAAAA 781950 28 100.0 32 ............................ AACATATATTACTGATCACGCAGAAAAGCTAA 782010 28 100.0 32 ............................ TCTATCAACCATGTATACATCAGAATATAAAT 782070 28 100.0 32 ............................ TGTTTTGACACAATCTAATATTGAGCACATAA 782130 28 100.0 32 ............................ AACAAATCAAAATGCGGTCGTTTCTATTTCAC 782190 28 100.0 32 ............................ TTGTCTCTTTAATCGCAAGGGTAATTTTGAAA 782250 28 100.0 32 ............................ TTTTTGAGGCCAAGGAAGGCACGACGTAAAAT 782310 28 100.0 32 ............................ TAAAACCGCCTCGCATCACATGACGACGAGCA 782370 28 100.0 32 ............................ TATTGATTCTATTATATTATCGCCTAAAAAAG 782430 28 100.0 32 ............................ TATTTGCTGCCTCAATCGGCAACGATTTAATG 782490 28 100.0 32 ............................ AAATCCACAAATCCTAGATAAAATGCTAGTAG 782550 28 100.0 32 ............................ TTGAGAAATAAGGGAAATGTTAATACCAAACC 782610 28 100.0 32 ............................ ACGAGGGTATGTCTACTATAGCCCCTTCATAG 782670 28 100.0 32 ............................ ATTTTAAGAGATTTTATTATGAAAATGCGTTC 782730 28 100.0 32 ............................ TTACCTAAATGGAGAGAAAGCTAACTTTAAAC 782790 28 100.0 32 ............................ TGTATCCCCAGATCGAGAAGGAGTAGAAGCTC 782850 28 85.7 33 A.........A..C.............A CCATAGTCCCTTTCATGGATAATGCTTTTCTTG 782911 28 89.3 32 ..........A..C.............A ACTAATGCCAATAAAACCGATAAAAGACGTAC 782971 28 89.3 32 ..........A..C.............A ACTAATGCCAACAAAACCGATAAAAGACGTAC 783031 28 89.3 0 ..........A..C.............A | ========== ====== ====== ====== ============================ ================================= ================== 25 28 98.1 32 GTTCACTGCCGCATAGGCAGCTTAGAAG # Left flank : AATCTAGCTAAATGGTTAGCTCGTTTAATGGATTATGTGCATATCACAACCATACGTAATGTTCCTGAACATAAAGTAACTGGCTATGCTATTTATAACCGCAAACAAGTTAAAACTAATGCAGAACGTTTAGCCCGACATCGTGCTAAACGTGGTGATATTGCTTTTGATGAAGCCTTAAAACGTTATCAAAATGTCGTGACAACAACGGACTTACCCTATATTAAATTAGAAAGCCTCAGCTTATCTAATCACAATAACAAACATCATTTTAAATTATTTATCACCAAAAACAACACAGAGTGTACTAACAACCAAATCTTTAGGACTTACGGATTAAGTTCAGTGTCAAGCGTACCTGAATTTTAACCCAATATTTTTTGCTCTTTAAAAAAATAAATCAAAATCAATAAGTTATAATAGCAAATAAAAACTTAGGTCAAACCGTTATTTTTGTTCTAACTTGCTGTTATAACTTTATTTTTTATTGTAGTATTGTT # Right flank : ATTCACGATTACCGTGATTTTTTCATCCAGCTCTTTTTCTTTCAGATCGATAACTGAGTAAGTTGGCAAATCACTATTTCTATTTTGACTAACATTAGTGGTTGGAATGATTGCGATCATTGCAAGGGATTGTTTGATATTGCCGGCAATCACAGCTTCAATCGTCGGTTTTAATGCTGGGTTTGTCTAACAATCTTACGTATGACAACAGTATCAGAGGCACTGCGTTCGAGAGTTAATTTAAATGGCACGCCACTTTCATAAGATTTAAGTTGTTGTCAGTCACCGGAAAGAACAATACGTCTGCCTTGTCCGGTAATATTATTTAATAGGATGGCGTAGATTTTGTTGCCGATCATTCAGCTTTTATTAATGATAAACAGGCTATTTATCGACTAAGATATAGATTTTCATCTTAAAAAATATATTTTGCATTTATTTTTTTGCCGTTTGGGTCGATAGAAATGTATAACCTGCTGTCCAGCGAACATCAGTATTAT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //