Array 1 26567-24749 **** Predicted by CRISPRDetect 2.4 *** >NZ_OAGC01000019.1 Neisseria meningitidis strain Neisseria meningitidis isolate 22702, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 26566 36 97.2 30 ........G........................... GTTTCTTCCCATATACTGCTGTTCAAACCG 26500 36 100.0 30 .................................... CTTCCGTGAGATACATTTCCCAATCTTCTT 26434 36 100.0 30 .................................... TGATTTGCTCGACAGGTGAATAGCCATAAA 26368 36 100.0 30 .................................... AATTTAATACGGCGACCATCTCGTGCCAAG 26302 36 100.0 30 .................................... TCATCAATCGCCCACTCAAACCCAAGCATA 26236 36 100.0 30 .................................... CCGCAAAGCAGCCGAAAAAGCCGACAGGAA 26170 36 100.0 30 .................................... TGACAAATAAAGCACGATTGTTGCAAAAGG 26104 36 100.0 30 .................................... CCAACGGATAAAATTACGCCCAAGCACCTG 26038 36 100.0 30 .................................... GTATTGAGCGTCAAGTACTCGCCATTCGAG 25972 36 100.0 30 .................................... TGAAGGTTCGATAATTCGACCTGAAAAACG 25906 36 100.0 30 .................................... TCACTCTAAAAATCCGATTCTACCACCGCT 25840 36 100.0 30 .................................... TTGGCTCGTCTGCTGCCGTCAATCGTGCGC 25774 36 100.0 30 .................................... TAGATTGCCTCATATACGCCGAGCGGGTAG 25708 36 100.0 30 .................................... CAGGTCGTGCTGGAGCAGGCCGACGATTTT 25642 36 100.0 30 .................................... CATACAGTTCATCTTCACCTGCAATCAGGG 25576 36 100.0 30 .................................... TCTGCGGATTCGTACAAGTCATAAACTTTT 25510 36 100.0 30 .................................... ACGAGTTTGGCTGCGCCCAAGTCTTTTGCG 25444 36 100.0 30 .................................... CCACTTTCGTGGGAATGACGGGATTTTAGG 25378 36 100.0 30 .................................... CCCATCAGCAGCACCCTGCCTTCAGACGGC 25312 36 100.0 30 .................................... GAAGGTGCGGCGGAAGGCGGCAGCAGCCAT 25246 36 100.0 30 .................................... CGCGTGTAGCTGTATTTGTCGATGGCGGCT 25180 36 100.0 30 .................................... AGCCAGATTTCGGAAAACCCTGCGGGCTTT 25114 36 100.0 30 .................................... GACATCAAACTGGGTATAGCGGTTGTGGCT 25048 36 100.0 30 .................................... ACGCCGAACTCGTCCTTCACGCGGCGGACA 24982 36 100.0 30 .................................... AAATGCGTGTGGGTGTGGTCGTCGATTTGT 24916 36 100.0 30 .................................... AAATTTGAAAATTTCTATATTTTGGTTGTG 24850 36 100.0 30 .................................... AAACCAAAAAACGCATCTTCCTGATGGCGC 24784 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 28 36 99.9 30 GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT # Left flank : GGAAACGGTCGATGTGTTTGGCAATCATGGCTTGTGCGGTTTGCTGAAAGAAGGTGCTCATGAGAAATCCCCTAAATGTCTTGGTGGGAATTTAGGGGATTTTGGGGAATTTTGCAAAGGTCTCATTTTGCAAGATTTTAGTTTAATCATCAAACAGGGAACAGCAAAAATCCCCGCTGCAACGGGGATTTTTGTTCGGCTCTCGCCTGTGTGATTAACTTCACTAGGAGAAGCTAAAATGCTTAAATTCCTTATGCGTGGGAAAAAGTTGCTGCTGTCCGTTGAAGTGAACCACAAGTTCATTTTAGCGGTTGCTTTGCTGTTAAGTCAATGCAGTAGCTAACCCGACCACAATCAAAAAAACGCAAGTTTTCCGCCTACTCTGTGAGTGGGCGGTTTTTTCTTATTTCAAATCTGTGACACAATATCTGTCGCCTTTCTTGCCATAATTGCACTGTGTCTCAATGACTTTAACGCACGTTCGCTTATCGCAACGGCTG # Right flank : ACCCCAACGGGAAATCCTTATTCTATAAGGATTTCCCGTTTTATTTAGTCTGAAAAAATGGGCTTAAAATAACAATAATTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGCTCGCCCAACAGCAGTTTCATGGCGGCATATTGCTTTTCTGTTATCTCCAAACAGCGGATTGAGCCTTCTTGCGGAAGGTTTGCACATAGTCTATTGTGGTGTTTTTGCAACGAATCGCGGCCTTTGACGATACGGCTGTATACGGAAAGCTGGAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGCTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATCGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACACCGGCTTGAAATGACGAAACCATTTTGTCGATGGCAGCCAAGGTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: R [matched GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.90,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //