Array 1 24390-25815 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB731288.1 Thermoanaerobacter thermohydrosulfuricus WC1 scaffold00027, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 24390 30 100.0 36 .............................. TGATTTTAAAGATAGTAGAAGAAGCTCAAATGTTTA 24456 30 100.0 37 .............................. CAAGGCATTTTGGCGGCTTGTATTGGAGGTGCGGCGA 24523 30 100.0 37 .............................. AATGACTCATCTGAAATTCGTACATTTTATAGGTTAG 24590 30 100.0 35 .............................. ATACATTTGGCTGATTTTTACCCCCGCCATATATT 24655 30 100.0 36 .............................. TGTTTAAGGACGTGCCAGCAAATCACTGGGCGGCTG 24721 30 100.0 35 .............................. CTGCCTTGCCGAATTTGCCTGTTTCGTAGCGGGGG 24786 30 100.0 39 .............................. AATGGCGTTTTTGATGCCATATCCATTATCTGCTTCATC 24855 30 100.0 36 .............................. TATCCAGTTGTAAGCATTTCTTTTGGAAAGGGCATA 24921 30 100.0 36 .............................. TAGTCGGTACCGTTGCAACAGGGAAGGCAAGGACGA 24987 30 100.0 35 .............................. AAAAAAGGAGGATAAAAAAATGGTAAAAGTAATGA 25052 30 100.0 36 .............................. GGTGATTGCTCGCGGCGAATCGGCAAGGGATACCGG 25118 30 100.0 37 .............................. TATGCTACTGTGCCGTTTTTGCCTGCCCTAACTGTGC 25185 30 100.0 35 .............................. GTGGCTAAAATGCAGTAAAATAGCGGATTGTAGAG 25250 30 100.0 37 .............................. ACAATCTGCCTGTCATCCTCGTAAGCAAGTCCGTTTA 25317 30 100.0 38 .............................. CAGCTTATGTAGCGAATATAAAGACCTCGAAGAAGCTT 25385 30 100.0 35 .............................. TATTGGAAGTTGGTATAACGGCACTCAGCAACTTA 25450 30 100.0 39 .............................. CAAGATTCTGTTGCTAGGAATGCTGTGAGGGCTTTGCTC 25519 30 100.0 38 .............................. GCGTCTGTTACTACTGGTAGCCCCGTAACGATATATCA 25587 30 100.0 36 .............................. TAGTTTCCGGTACCGTTTTACCTATAGCCTGTGCCA 25653 30 96.7 36 .............T................ ATCAAAAAGGAGGAAAAGAAAATGGAAAAAATAAGA 25719 30 100.0 37 .............................. CCTGGAGATATAACAATGTATCCTGTTACATTACCGT 25786 30 93.3 0 .........................A..G. | ========== ====== ====== ====== ============================== ======================================= ================== 22 30 99.5 37 GTTTTTAGCCTACCTATAAGGAATTGAAAC # Left flank : ATAGGTGCAGCTTTTAACAAAGTAGTAAATTCATTAGTTGTGGATGTTTTAACTCCACTGATTGGAGCAATATTTGGAGCTCCTGATTTTTCTGCCCTTAAATTAGGACCAATAGCCATAGGTAATTTCCTTAATGCTGTTGTTAACTTTATTATCGTATCTGCAGCCATATATTTTTTCATAGTAGCTCCTATGAATGCTATTAGACAGCGAAAAGCAAAAGAAAAAGAACAAACACCACCTGAACCATCAGAGGAAGTAAAACTTTTAAGAGAAATATTAGAGGTATTAAAGGAAAAGTAAGGTAAGAATATTGATTAATATAAATTTGTCGTCGACCTAAGATAATGCAAAAAATGTTGAGGATCGACGACAAATTATTTTTTCAATTTTAGAAAATAGTTGATTTTGTCAAACAATATGGTATAATAAAGTTAAAATACTTGACAGATAAGATGAAAAAAAGAAAAATTTGTTCTTTATTATATTTGATTATAATG # Right flank : CCTATAATTAAGATATGAAGGTTATAGTATTTACTTAGACCTGTTTATAGGAAATAGGGAAAGAGGAAAAGGCACTGAAGCAATTTCAAAAGATTTATGTGGAGGACAGTTATTTTTGGGATATAGCTGAAATTTTCAATGATATGGAATTATAGAACTTTAAATATGGGTAAAAGGGAAATAGTTTAAAAATGTTTATGAATTTAAAAGACTAAGTGTGTTAGTAAGAAAATATAGGGGTGTGTATAATGCCTTTAAATGAACAACAAAAAGCATTTAGAAGACAAATAAAAGAGTATGAAAAAGAAAAAAGATCAAAAGGTATAGAAGAACCATTAAGTTATGTCAATGAAAATTCTCGTCCTTGGAAATATGTCAAGACTTTATCTCTTGCAAGTATAATACCAATACTTATATTATTATGGAATACGTATGCATTTTCCACATGGATAAAGCCAGTACTATGGAAGTTAGGCTTTCCACAGGGGAATGTAAGGCCG # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTAGCCTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.20,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 154127-164249 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB731280.1 Thermoanaerobacter thermohydrosulfuricus WC1 scaffold00019, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 154127 30 100.0 36 .............................. ACGGTAACGGTAGAAAACTATATTCATCTTCTAGAA 154193 30 100.0 35 .............................. TATCTTTGGAACAATGATTACACTTTTAGAGAAAA 154258 30 100.0 39 .............................. GATGAAGAAGTTATTGCAAGTGATAAAACATTGTCCAGA 154327 30 100.0 37 .............................. TATCTTACAGAACAATTTATACGGGCCAAAGTTAATT 154394 30 100.0 36 .............................. TGCGTTCTATCTTTTCTCTATACGCTCTTTCTTTTT 154460 30 100.0 35 .............................. TATGGTAGCGACTCTTATCTCCAACAATGTGATCC 154525 30 100.0 36 .............................. GCTTTTAAACATTCTTTGACGTTCTCTAGACTAAAA 154591 30 100.0 36 .............................. TAAGAATGAAAAGAATGATAAAGAAGATGATGTATA 154657 30 100.0 35 .............................. CCTTTTAAATTAATCGATTAGCATAACTGATTTGG 154722 30 100.0 35 .............................. TTTTTTCTTTTTCCTTTTTTTCTTCTTGCTGCTCT 154787 30 100.0 37 .............................. TGAGCATAGAAATGCAGACAGCATTAAGTGAGGACAC 154854 30 100.0 38 .............................. CGTTGGAGATAATGAGAGAAGCTATACAAAAAGTAGAA 154922 30 100.0 38 .............................. TTAAATTACTCATTTTAACTTACCTCCTTCTCATATAA 154990 30 100.0 37 .............................. AGCAAATTCAAGGCAAAAACGGCAAATTCCAAAAAAT 155057 30 100.0 36 .............................. AGTGAAATAAAATCAACTTATGAAGAAGAAGCAAAA 155123 30 100.0 37 .............................. TTTTGTCATTATACAACTTTTGCAAGTGTTCAGGGCG 155190 30 100.0 36 .............................. TCGTGAAGGATTAGAAAGAATACTTACGATTTTATA 155256 30 100.0 38 .............................. CTTCATAGCTTTCCCATGTGGAAGGTTTCAAATCTATT 155324 30 100.0 36 .............................. TGAAGTTGACAGTGAAGGTAATATTGGAGCTGCTAA 155390 30 100.0 36 .............................. ATTACCTCCTTTATGTTTTATTAAAACATCTATAGA 155456 30 100.0 36 .............................. AGAGTCAACTGGGAGGAAAACATAAACATTGATAAA 155522 30 100.0 36 .............................. TTTATATCTCTTTTTACATCATATGAGGGCAATTGT 155588 30 100.0 35 .............................. TTAGTTCAACCATTTCGTTTTGGACTGCTGTATTC 155653 30 100.0 36 .............................. ATGTAGAAGGTTCACTGCCGACCTTCAAAAATACAT 155719 30 100.0 36 .............................. TCTATATATACTTCATGGGTTTTAAAAGTCACTGTC 155785 30 100.0 37 .............................. TTTTTTTCTGCAGTAACTTTGAATATTGTTCTTATGA 155852 30 100.0 35 .............................. CTGATTTCAACTGGCTGTTGAATTGTTATTCTATG 155917 30 100.0 37 .............................. CCTTAAGCGGTTGTGCATTTATCACGATTGTTACGTT 155984 30 100.0 36 .............................. ATTTTACCAGTAGGTGTGTCAGCAGTACTTTCAGTT 156050 30 100.0 35 .............................. CTACTCACTCAAAGCTCCTTACAGAGCAAAAGCTG 156115 30 100.0 38 .............................. CTAAATTTTCGTCCACAGGTATTAGCCCAAACATGTAG 156183 30 100.0 36 .............................. CAGATAATAAGCTTCTTAGCGGGCTTTTTTGCTAAA 156249 30 100.0 35 .............................. TTAATACCAAAATCTCAATATAAACCCACTAAACA 156314 30 100.0 35 .............................. AGCTATTTGTGATGGTATTGTGCAGGCTTTTGCGT 156379 30 100.0 36 .............................. TATATTTGCTTTTGATGTTCCATATCATAGTGTTTA 156445 30 100.0 36 .............................. AAAGCAAATAATGTATAATAAAGGTGGAAAATATTT 156511 30 100.0 38 .............................. CAAATTCAAGATTTACCTACTGAAGATGTAGAAGTCCC 156579 30 100.0 38 .............................. CTGCCTCAACCACATCAGACCAATCCACTTTGTTCCCG 156647 30 100.0 36 .............................. TACTACCAGCAACCATCTTTTCAACTGTTGCAGTAA 156713 30 100.0 35 .............................. AAGCTTGATGAATTCCCCTTCCCGGTATGGCTGAA 156778 30 100.0 37 .............................. CATGGAAGCATTGTTGTTAATACATGATTTAATTCTT 156845 30 100.0 36 .............................. AGTTCCCCGTCTCCTCCGGCAGGAGTCAGATAGCAG 156911 30 100.0 37 .............................. CAGGATTGGGATGTCATAGCGGTAGACACCGAGGATA 156978 30 100.0 37 .............................. ATGTTGTAAAAGCCTATAAATGTTGTCAAAAAAGACA 157045 30 100.0 36 .............................. ATTTCCATCCTTAAAACTGCCTGTCTCGCTGCCTGA 157111 30 100.0 37 .............................. GGAACATACTGAATGTCATAAAAGGAATAAGAAAAAG 157178 30 100.0 35 .............................. ACTGTTAGATTATTTACATCCAGCTGAAGCATATC 157243 30 100.0 37 .............................. CAATAAACGGTGTAGATTGGCAAAAAACGCCTTACAA 157310 30 100.0 35 .............................. TGTAAACCTCAAATATTTAAGACTAGAAAAATTGG 157375 30 100.0 37 .............................. CTGCTATATTAATCTTTTTATCCATTCCTGCATTTGC 157442 30 100.0 35 .............................. TATACAAAACAGATGTTTACAGGAGAAAAATAATA 157507 30 100.0 36 .............................. GATGTAATAATTGAAGTAGGCGTATAGCCATATAAA 157573 30 100.0 37 .............................. GGGGCAGATGTTGACTATAACGATAAAACCCAGCAGA 157640 30 100.0 38 .............................. ATCTTAATCCGCCTTGAATGTTTGTAAAATAGGAGTAA 157708 30 100.0 35 .............................. AAGAAAAGAAGCTTCAGGCTGAGCTGAAGCCCCTT 157773 30 100.0 37 .............................. CTGCTATATTAATTTTTTTATCCATTCCTGCTTTTGC 157840 30 100.0 35 .............................. GGTTCAGACCGTGTGTATATACGTTATTTGGCTGA 157905 30 100.0 38 .............................. ATTATTTCCAGAGTAAAAGAGAAGAAAAGGACAATTTA 157973 30 100.0 38 .............................. TCTATAAATATCGGTGCAATAAAGCCATAGTGTTCTGA 158041 30 100.0 35 .............................. TTCATTTTGGAAAGCTGATCTATCCAAGGTTTTAC 158106 30 100.0 35 .............................. ATACTAAGCCTAGCCACCTGCTTGTCATTCTCAAA 158171 30 100.0 36 .............................. AAAGACAGAAAAGTTATTAAACAGCAAGAAATCAAT 158237 30 100.0 36 .............................. CAAGCGGCCCTATCATCGACACGGCAACGATTATGG 158303 30 100.0 36 .............................. AGCTTTAAGTGCTATTGAAGCTGTTCTTCCTCTTGC 158369 30 100.0 35 .............................. GCTTTCTTTTCTCTGATTTTTTCAATGGGGCATAA 158434 30 100.0 36 .............................. ATACATTTTTAAAATTTTTTTTGTAAAAAGAAAAAA 158500 30 100.0 37 .............................. CCGTTACGGCTTAAGGTGGTGAGCAATAATGTACTGC 158567 30 100.0 36 .............................. AAGCTTTGACCGGGCAGGAAGCTACACATAAGCCGC 158633 30 100.0 37 .............................. CCCTCTTACGCCGTGGTCAGGAGCCGCTGTACGGCCA 158700 30 100.0 36 .............................. AGTACCAGGCTGGCCGCCTTAAGGTTGGGGCTGCCG 158766 30 100.0 36 .............................. CATGCAGATGATTGTTACGAATGTCAGCAAATGATA 158832 30 100.0 36 .............................. AGAGCTTGAGCAAAGAGCTGCTGAAAATGCCCTGCT 158898 30 100.0 38 .............................. TATAGGGTAATATAGGGTAGGTGGTATGTGTGGCTATA 158966 30 100.0 36 .............................. TTGGTTATCATTTTTCTACCCCCTCCAAAAATCTTA 159032 30 100.0 36 .............................. TCTCGATTTTCGCTCCGTGGATCCTTCCAAGCTCGA 159098 30 100.0 35 .............................. TTAGCTAAGTAGAAGAAAATTGTTGCATCTCTGAA 159163 30 100.0 36 .............................. CCCGGCTGTAACTCCACGTCCACTTGAGTTAGGCTT 159229 30 100.0 37 .............................. TCATCTTCCTCAATTGCATAATTATCATCAATTACCG 159296 30 100.0 36 .............................. TGAACTGATGCTTTAGGCCCATTCAACAAGTAATCA 159362 30 100.0 36 .............................. AAGCAAAAAAATCAAACAAAGTAATCGGCTATGCGG 159428 30 100.0 36 .............................. GCTGTTTTTATACCTCTATCTATAAAACCATTTTCT 159494 30 100.0 38 .............................. TACCGCCTCGTATATTTTCATATGCACTTTGCACGTTG 159562 30 100.0 37 .............................. ACTTGCTCTTATCTATTGGGCAGCTTTCAGCGCCCTC 159629 30 100.0 40 .............................. TACCCTTAATCCCTCCACCATTTTCGTCAATTTTTTGTTT 159699 30 100.0 35 .............................. TTGCAAGTTCCGCCATTTATGAGACCTCCTCTGTG 159764 30 100.0 35 .............................. TATGCCTCTAAAGTAACACCAATAGGCTCTGTCGG 159829 30 100.0 37 .............................. CATTATTTCCCGCTATGTATCTACCAGGTGCAATATC 159896 30 100.0 36 .............................. GCAAGGTCTATATACCGTTTCATGCTTATCGACCCC 159962 30 100.0 37 .............................. TGTCTTTAATTTCTGCTTTTTTGAGCAGTTCATAATA 160029 30 100.0 36 .............................. AATTAAGCTGTAATATTTTAACATCAATGTTTTCCT 160095 30 100.0 36 .............................. TATCGAAACCCTGCACCTCTATTGCTACCTATCTGC 160161 30 100.0 37 .............................. GAAATTGCCAAAGAATCGCATCTTATGCAATAGAGAA 160228 30 100.0 40 .............................. TCAATATAATAATATATTCTATATTTTTCTGATTTTTCCT 160298 30 100.0 36 .............................. TGTATTATAGCATAGATTTTTTTATAAAGTACGCAA 160364 30 100.0 38 .............................. TTTTTTATATGTGATATAATTTCTGTTAGAGATTTTTT 160432 30 100.0 37 .............................. TTCTTATCAAGTTCCATAAGAATATCACGCTGTACCC 160499 30 100.0 36 .............................. ACCCATCTTTGACTATAATATTTTTTGGAGATACAC 160565 30 100.0 37 .............................. CGCCGTTTCCGCACACTTCGCAATAAGCCACTGCCTT 160632 30 100.0 36 .............................. TGTTTAACCTCCGCATAGATTACCAACCTGCCCGGG 160698 30 100.0 37 .............................. ACTTCCTCCTTTTTGGTAATGGCCAGGATTTTCTCTG 160765 30 100.0 37 .............................. AGCTGTCCCATACCAACTGCCGGTGGGCTTCGTCCGC 160832 30 100.0 38 .............................. ACTCCACGGTTAGCTCTGCCAGTCGCTGCAATAAGTTG 160900 30 100.0 36 .............................. TTCTTAAATCCTGCGCAACAAGTATAACATCATAAC 160966 30 100.0 36 .............................. TATAATTTCATTGCCAGTCTAGCATAAACCTCGAAA 161032 30 100.0 38 .............................. TTGGAAAATTCTCTTGTATTCGCAGGAGCATGTGACAG 161100 30 100.0 35 .............................. TTAGTCAGTTCCAAAGTAAAATACTCATCATCACC 161165 30 100.0 37 .............................. TCCAATATTTTTTTTTCTTCTTCTGTAAGTTCTAATT 161232 30 100.0 36 .............................. CTCTCTTGACTTGCCAGCAATCATAAAATCTATGTC 161298 30 100.0 37 .............................. CTTTTTTAAAATTTTTTATTGCCCTCAAACCTACTTG 161365 30 100.0 35 .............................. AGTTCAAGCTTTTCAAGGTCAAGTAAGGCTTTTAC 161430 30 100.0 37 .............................. ACTAACTTTTGTATAAGGTTTATTTGGTTTTTGCTTG 161497 30 100.0 35 .............................. GGTGAAGCTGTTTTAATTTCCGATGGCTCATGGAA 161562 30 100.0 35 .............................. GACTTATAAACATCAACAAGAGAATCTTTCAAAAA 161627 30 100.0 36 .............................. AAGGTAGGCGTTTGATTAGTTCTTTGGGTATTTTAA 161693 30 100.0 35 .............................. CAGTAAAGGAAACCTAGCAGATATCGGCAAAGATG 161758 30 100.0 35 .............................. CTACCTTGTCTTCTGTTTGCATTACCCTCTCCCCC 161823 30 100.0 36 .............................. TATTCTTGTTTGTGTCTTTTTGTGGTTTTTTTGTGG 161889 30 100.0 37 .............................. ATAGTGATGTAACTTTTGACGTGCGTATCATAGCTGA 161956 30 100.0 36 .............................. AAGGAATAAGGTTCAATCTTATCCAAGAATGTTTGA 162022 30 100.0 37 .............................. ATGAAGAAAAGTTCGTGAAATTGAGAGACTGGATAAA 162089 30 100.0 37 .............................. AGAATGTAGCAAGTTCTTTTGCAAATGGAGAAGTAGA 162156 30 100.0 38 .............................. TGTAATTACCTTCAGCACATATACCAATGCTGTCGTAG 162224 30 100.0 35 .............................. TTCTTTCGGATACTTCTGCCGGATTGCTTATCTCT 162289 30 100.0 35 .............................. TAGTTTGTGGTGACTATGGTCGGCATATATCCTTC 162354 30 100.0 39 .............................. TTCAAACTGCCGTCGGAATTGACATACCGCACGTTGTTG 162423 30 100.0 36 .............................. AATATTCTTCAATAAACCGTCTCTGTTTTACTGTTA 162489 30 100.0 38 .............................. AACGCCTTCACGGGCGTTTTTTCATATCCAAAATAAGC 162557 30 100.0 37 .............................. TTATCTATGATGGCCGGTACGCCGTTTTCAATTACAA 162624 30 100.0 35 .............................. ATTTTGGGATTACTGTCTTGAAGTAGCTCATTAGA 162689 30 100.0 37 .............................. TCGCCCCGCTAACCTCAAAAGTAAATCCACTATCACC 162756 30 100.0 35 .............................. CATATTTTATTTACAATATTTTTTGTAAAATGCGC 162821 30 100.0 36 .............................. TTATGTAACACATTAATTAGTAAATTTTCATTCATC 162887 30 100.0 36 .............................. CAAGCCAACCTTCCCTATTCCTGCGCCAAAATACAG 162953 30 100.0 36 .............................. CTTATACCACGTTTTTTCCATCCTTCTTTACACAAA 163019 30 100.0 33 .............................. GAAGAAGAAGAAGAAGTAATATAAATAAATAAA 163082 30 100.0 37 .............................. GCAATCATGTACTTGTAACCAGCATGAACTAATTCAT 163149 30 100.0 35 .............................. ACGTTTAGATAAAGGTGGCCGTGTTCAGAATTATC 163214 30 96.7 36 .............T................ AAACACAAATGGGCTTGTGAAAGGTTTTTGAAAGAC 163280 30 100.0 39 .............................. AGCGTTCTGTTTGTGGAGTCATAATTTCAAAAACATTAC 163349 30 100.0 36 .............................. TAGCAAGTATAATAGACCTTTATAGCACGGATTCCT 163415 30 100.0 35 .............................. ATTCAAGAATATGGCTACATAACAAAAAGAGATTT 163480 30 100.0 38 .............................. ATAAAATTTTTTTGCGTATTGGTGGTATATAAATATAC 163548 30 100.0 38 .............................. CACGATAACACGAGATGAAATAGACCTTTTAGGACACA 163616 30 96.7 37 .T............................ TTCCTAATATTGACGCATGAACGCCGAATGTAGCTAG 163683 30 96.7 37 .T............................ TTGTAAGCCTGCTCTGCAAAATCGTTGTGAATTTGCT 163750 30 96.7 39 .T............................ TCGGCGTTGACTTTGGTATGCAGAACCCGACAGTATTTT 163819 30 96.7 36 .T............................ ATTGTTGCAATAATGCTTGCGCCGACGGGTCTACAT 163885 30 96.7 39 .T............................ AACTGCTTGTAGTGTTTTGCTAGATGGTTGTACATTGCT 163954 30 96.7 36 .T............................ ATAAAAGCCTTCTCATTACCTGTGAATGCGTATCCA 164020 30 96.7 37 .T............................ TACGCATGTTTTGATTTAGGATGGACGACGGAACGGT 164087 30 96.7 38 .T............................ AGGTAATGCCACCAAGCACCTAAAGATTTAATTTCTTT 164155 30 90.0 34 .T........C................G.. TCTATCTGTGATACTGATTAGCCTTATACCTATT 164219 29 83.3 0 .G.......T...T...G...-........ | C,A [164222,164235] ========== ====== ====== ====== ============================== ======================================== ================== 153 30 99.6 36 GCTTTTAGCCTACCTATAAGGAATTGAAAC # Left flank : GAGCCTGGGGTTCAGAAACTTTATGTAGAATTTTCCCTATGGAATGTAAAAATTTAGATATAGAACCTACATTTTTTAAAAAAAGAGCACTATTACAACTACTACTAAAAAAAATGAGAAAATATATAATACAAATCCGTATAAATCGCGCTTTGAAAAATCCTCCTATAAAATTTAGTGCTCGGAATGGTATAGAAGCTAATTTTTACTGGATTCCCAAGAATCAAGTTGAAGAGTATTATGATTTTGAAACAGGTTTTATTGACGAAACAGCAGCTGTATATATTTATTAAATTAATAATTTAATTTTTACAGATTGATTTTTTGTCGTCGATGCCCAATAGTGCAAAAACGCCTGGAGATCGACGACATTTTTATTTTTTTGATTTTTAGAAAGTAATTGATTTTATTGGACAATATGGTATAATAAAGCCAAGATACTTGACAAGAAAGATATAAAGGAAAAATTTTTTCTCCTCTTTTTATGCGCCTTTTAACGT # Right flank : CTAAAAATAAAAGGTAAAAATGTTTGATATATTTTTGAGTCAAGAATGAATTTTTTGACCATTCATATTACTAAACAAAGTGGTTGAATAATTAAAAAGGAGTGGCTTATTTATGTTGAAGCGTAAAATTTTTTTTGCCATAATTATTATTGGGGTTGCTATAGCGGCAGTAGTGGTATATTACAAATATTATAACCATGTTGATCCAGCACTGCAAATTACACCGTCAGTTAGGATATATTTTTCTTCAGATGCATCGCATTATTTGTACCCTAAAGCAGAAAGACCAGATGAGGCTCGACACAGATTTGTCGAATATAACCTCATTGTAGAAAATATAGGAAACGATACTATAACTAAAATATTAGGGAAGGTAGAGCTAGACCCACAGTTTGAGGAATTGGTAAAAAACAAAGCAGAGATGAATATACCTCTGACATTAAAACCAGGCCATAGAGTCAAATTAGGATATATCTATTTCGTTGAAGGTAAACCTGAAA # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTTAGCCTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA //