Array 1 270772-274030 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADBJS010000004.1 Klebsiella pneumoniae strain UPMP1793 contig00004, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 270772 29 100.0 32 ............................. CGGATCCGTAAGGTTTTTGATAAAAAAAGCGA 270833 29 100.0 32 ............................. GCAAAAAAGTGGGGGTGTGTATGTCTACAGGA 270894 29 100.0 32 ............................. GGATACGCCTTCGGGCTTGTGCCGTTTACGTC 270955 29 100.0 32 ............................. GATTTTGCTAAGTGCCACAATATTCCCCCCAT 271016 29 100.0 32 ............................. GCATTTCAGAGAGTGCACACCCGCTTGATGCG 271077 29 100.0 32 ............................. GCCGAAAAATCGTGCCGTGACAGCAGTTTGTG 271138 29 100.0 32 ............................. CAAAATCTCTGCGAGGAATTGATTTCGGGTCT 271199 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 271260 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 271321 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 271382 29 100.0 32 ............................. ATTAAATTTTTCGGGTAAAGAGAAATTGCGAA 271443 29 100.0 32 ............................. CTGCGAGCTACCCTGAATTTCAGCGACAGGGG 271504 29 100.0 32 ............................. TAGTGCCATATATTATCCTCTGCGGTATGACT 271565 29 100.0 32 ............................. GAGACTATTATGCGAAAAACTATTACTCCCGA 271626 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 271687 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 271748 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 271809 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 271870 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 271931 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 271992 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTACAGGTAATACGT 272053 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 272114 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 272175 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 272236 29 100.0 32 ............................. GCAGTCATGCAGCAATCCTAACAACCTTTCGC 272297 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 272358 29 100.0 32 ............................. CAACCTACGGGGATCCGAAATCGCCTGCGGTG 272419 29 100.0 32 ............................. CGACAGGCCTCCGAAATTGTACGCAGCCTTGA 272480 29 100.0 32 ............................. CGATCAACGTACCGGAACTACTCTGCAGACCA 272541 29 100.0 32 ............................. GTTGTCAGTCAGGGAAAATCTATCCGCAGGGG 272602 29 96.6 32 .G........................... TGATTGTCGCTATACCAGCGCTCAAGGAAAAT 272663 29 100.0 32 ............................. GTCAGATCACGTCAACCACGCTTGATTTTACC 272724 29 100.0 32 ............................. CTCACTAACGCCGTTGCCTGCGATAGCTGATG 272785 29 100.0 32 ............................. GTGATCGGCCCGGCAATGCGTGAGCTAATCAA 272846 29 100.0 32 ............................. TTGAGTGACAGAGAGATTGACCGCCTTGTTTT 272907 29 100.0 32 ............................. CGTTTAACGCAGTGCGAAAAATTACGACACCA 272968 29 100.0 32 ............................. AACTGAATGTTCCAAATCCGGTTGGACGACCA 273029 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 273090 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 273151 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 273212 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 273273 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 273334 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 273395 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 273456 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 273517 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 273578 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 273639 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 273700 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 273761 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 273822 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 273883 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 273944 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 274002 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 54 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGTTGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //