Array 1 49097-48803 **** Predicted by CRISPRDetect 2.4 *** >NZ_ABDP01000016.1 Clostridium botulinum Bf gcontig_1105471839370, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 49096 30 100.0 35 .............................. GGCAAACCTACTACAATATCTTCTTCTATAAAATC 49031 30 100.0 35 .............................. TGCCATAGCCTAGAGTTTTTACTCCTACTATGTCA 48966 30 100.0 35 .............................. TACTTTTGTTTTGATAATTGGTCTTTTGATAACTT 48901 30 96.7 37 ...............G.............. AGTCTAATTATTATAACAGCATTTTCTGTGTAAGGCT 48834 30 86.7 0 ........AC.....G.............A | TA [48807] ========== ====== ====== ====== ============================== ===================================== ================== 5 30 96.7 36 GTTGAACATTAACATAAGATGTATTTAAAT # Left flank : AAGGCAATAGTAAATGGTGTTTTAGGGACATCTTCTAATGTAACACCTGCACTAAGCAAACCAACAGGCAACAATAGTGGCTGGGTTAATTTAGATGGTAAATCAGGTACTATAAATACACCAAGCGGTGTAAATGTAAGAGAAGCTAAAAGTACATCTTCTAAAATATTAGGTGCTTTACCTAATGGATCAAAAGTACAATTATACCGTAAAGAAGGAGATTGGATACATATATATTATCCTCCACATGGAGGTTATGTTTATGCTAAATATATAAGATATTAATTTTTTGAAGGTACTTCTGTAATGGAAGTACCTTTTATTTTTCCAACCTACTTTAATTTTAAAACCTATCTTAGTCATTGCTATACAAGGGCTTAAGGTAGATTTTTTATATAGATTTGAAAATATTACAATCGGTTGGGAAATTTTTTAGAGAACCTTGTAAAATCAATAGTTGTATGTTATCCTTAAAATTAAGGAATGGCTATTTTACTATG # Right flank : ATGGTAGTTGTAGCTTATGCCCTATAGCTATTATTTTTTGCATTTAAAGGAATTTTTTAACATTTGTAGAATAATAAATATAATGCTTCCTAATAGGTTAAATACAAACGTCCTTATTTAAACAAAAGAACCCCAATAAAAGGGGTTCTTTTTGTATGGATTTATATATTGGTGCTATGTATTGGTCTATTTTTATTATATCCAGATGTAGAAAAATTAATCAATTAGAAATATATAAACTTTCAATTTTGAGGGTACTTCGATAATGGAAGTACCCTCTTTTTTATTCGGAAAATTATTATAAATTATATAAATATTTCATAAAAAGGTATTGATTTATTATACTATGCATAGTATAATATAAGTATAGTAATTGATAAGGAGGTGAGCAAGTGATAGAAAGTATAGGAAAGTTAATAGCCTTAGTAATTTCAATACTAACAATCCGTCAACTGAGTTTGCAGAACAGCAAGACGGAGTTAGAAATCAAAAAGCTAAGG # Questionable array : NO Score: 5.90 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATAAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA // Array 1 120271-120044 **** Predicted by CRISPRDetect 2.4 *** >NZ_ABDP01000013.1 Clostridium botulinum Bf gcontig_1105471839332, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 120270 30 100.0 35 .............................. TCTATTTCTTTGTTTGTATTTTCAATGTTTTTCTC 120205 30 100.0 36 .............................. TCTTTAATCTTATTAAATATTTTTTCTGTTTCTTCC 120139 30 100.0 36 .............................. GATGAAGAAATAAAACAAAACATTTCCAGTAAGATA 120073 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ==================================== ================== 4 30 100.0 36 GTTGAACATTAACATGAGATGTATTTAAAT # Left flank : AATCATCGGGAAAGCTTTCTGGAAAATCTTGATATTCCAATGGGGATGTGCTATTTTTAATTTTAAGGAATATTGATTTTACAGTGGTTGAACCTTAACATAGGATGTATTTAAGACTAATTTTCCTAACGTAGATATAATACCATTCACCAAGTTGAACCTTAACATAGGATGTATTTAAGATAAAAAAATGAAAAATATGAAGCATATTTAGTATTGTTGAACCTTAACATAGGATGTATTTAAGCAGGGAACTCAAATTTACAATTTGGTGTGAGTCACTTACTCCTTGGAGAATAAGAGAAGGAGTTTTATAAATTGAATCTTTCCAGGCGTAACAAATTTTAAAACCTATTCTAGTCATTGATATATAAGGCTTAGGATAGGTTTTATTTTATATTTATTAAAAAACGTAATCACTTGGAAAACTTTCTATAAAACCTTGCAAAATCAATGGTTGTATGATATTCTTAAAAATAAGGAATGGCTATTTTACTATG # Right flank : ACTATTCTCCTCTTGTAGCGGGAGTTCCTATACCTGTTGAACATTTAATTTCCTTTTAGGTGCAATTATTTTTGGGTTATTGACTTGTAGTCTAAAGCTACACCATAAAAAGGTTCATTAAACACATGTGGAAGAACAAGTAATAGATACAGCACTTGCTATTGATGCGGTGAATTGTATTACAAATAACTAAGGTTTTATTTAAAACTGTTCATATGGCTGGATTTAAGAAATATAATAGTGTCCTAAGTTGTATCATAACCTAAGTAATTTATAAGAATATATGTTTATATTTATTTTAAGACTATTGTATTAATATGATCTATCCAGATTTAATTGTGAGAAATTTCATTATAAACTTAATAGGGAAGTCTTAGATTTTTTATTGCATGAGATTGTACGGAAAATATTAAATTTCACTATAACTTAACAAATGATTGATACAATTTTAAAAAAATCAGGACTTACAATGATAAAGTAGGTCCTGATTTTTATTAAAT # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACATTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [61.7-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA // Array 2 120685-120524 **** Predicted by CRISPRDetect 2.4 *** >NZ_ABDP01000013.1 Clostridium botulinum Bf gcontig_1105471839332, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ====================================== ================== 120684 29 100.0 38 ............................. ACTAATTTTCCTAACGTAGATATAATACCATTCACCAA 120617 29 100.0 36 ............................. ATAAAAAAATGAAAAATATGAAGCATATTTAGTATT 120552 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ====================================== ================== 3 29 100.0 38 GTTGAACCTTAACATAGGATGTATTTAAG # Left flank : ACTAGGAATAAAATAACCTCTAACATTCTCATTATAAACTACCTCCTATTTTATCTGATGACTACCTGCTCTAATACTGCTATTTTTTATAAGTTGCAGATAAGAGCAGCTACGTCCCTATGTTAGTTCTTCTAAGCTTCAACTGGAGTAGGGATTTCTTTTAAGCAAACTCCGTTTGAAACTAAGAAGTGTTTGGTCAAATTCATCCGTAATGAAAAACATCAATGGATGATAATTAAATAATAAGCATTGAAGTATACTGCAATGTCAAGTCTATTTGAGAATATTTATGGTGTCAGATACTGTGCGTCCATTATAGTAGTTTTTCCAGGTAAATTAAAAAATAAAAGTAATGTAAACTCAATCATATTAGTGGTCTATATAGGATTTTTTATAGAAATTTCTATTTTATAAAATCATCGGGAAAGCTTTCTGGAAAATCTTGATATTCCAATGGGGATGTGCTATTTTTAATTTTAAGGAATATTGATTTTACAGTG # Right flank : CAGGGAACTCAAATTTACAATTTGGTGTGAGTCACTTACTCCTTGGAGAATAAGAGAAGGAGTTTTATAAATTGAATCTTTCCAGGCGTAACAAATTTTAAAACCTATTCTAGTCATTGATATATAAGGCTTAGGATAGGTTTTATTTTATATTTATTAAAAAACGTAATCACTTGGAAAACTTTCTATAAAACCTTGCAAAATCAATGGTTGTATGATATTCTTAAAAATAAGGAATGGCTATTTTACTATGGTTGAACATTAACATGAGATGTATTTAAATTCTATTTCTTTGTTTGTATTTTCAATGTTTTTCTCGTTGAACATTAACATGAGATGTATTTAAATTCTTTAATCTTATTAAATATTTTTTCTGTTTCTTCCGTTGAACATTAACATGAGATGTATTTAAATGATGAAGAAATAAAACAAAACATTTCCAGTAAGATAGTTGAACATTAACATGAGATGTATTTAAATACTATTCTCCTCTTGTAGCG # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATAGGATGTATTTAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.20,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [60.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA //