Array 1 20378-20955 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADOEX010000006.1 Klebsiella pneumoniae strain SCPM-O-B-7848 6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 20378 28 96.4 33 .............A.............. TATGGGTTGCAGTGTAAGAGCGGCAAACGAAGC 20439 28 96.4 33 .............A.............. CGGCTCTTTTTTATCTCCTTCATCCTTCGCTAT 20500 28 100.0 33 ............................ TGATCGGCGTGCCGTTTGTTGGACCCGAAATAG 20561 28 100.0 33 ............................ CGTCATCAGCGCCTTGTTCCAGCGGCGACCACC 20622 28 100.0 33 ............................ TATCGTGCAGAGTCACAACCTGACGGGATTATC 20683 28 100.0 33 ............................ TCGTGCATGGTGAGGATTCTACAGTCGCACCAT 20744 28 100.0 33 ............................ TACCTCCCGGCGTCCGCGCCAGGGCGATCACGT 20805 28 100.0 33 ............................ CCTGCAGCTGGCCGTCGAGCTGACGGATGCCGG C [20814] 20867 28 92.9 33 ............T.T............. TTCATCACGTGTGAGCGGATTTGGCTCTATCCT 20928 28 89.3 0 ............T......A.......T | ========== ====== ====== ====== ============================ ================================= ================== 10 28 97.5 33 GTCTTCCCCACACGCGTGGGGGTGTTTC # Left flank : TTAGCGTTGGCGAGCCGGCGACGGCGGTGATCCGCGTCGAGCGCCTGCGACTCGACGGCGCAGCGCAGGATAACAGCCTCCAGCTACCGCTGCTGACCAGCATGTACCTCGGCGACCGCTGGGAGTACCTGTTCCGTACCGAAGGCGACGACTTTCCGCTGCGCGCCTACGGAACGGCGCTGCGCGATGCCGAACACTGCCATCTGACGCTCCCGGCGGAGGATGTGTGGATTTTTCCGCAGCGGTAACTTCGCGAAGCCACGGAAGGCAAGCGCCAGGATGACGCGCTACGTTCTGGGGATGACAAAAGCGTTTTACCCCCGGCTGCGGGCCGGGCAGGCCAGTAGGGTAGACCGGTCCAGGTCAGCAGCAAATCGACGGTGGTTATATGGTGACATACTTTTTCGTTTGATGAATGTTGATGCTGATGCGGAAACCCTGCGGAGTGCAATTGTTGTAAATCTGGCGTTTTAATACGCCGCTAAACACAATATGCTGGT # Right flank : TCGCCTTTCAAGTGACGACAAGTCACGTCTGTGCGCATTTCTCAGATGAAAGGGGATTCCTGACGTAGAGGCATCAATGCCGTGACATAGTTATCCTTAATGTACATCAATGTCTTCGAAATTTCGTTTGGCCAGCACAGTCTCATATGTTTTTTGTATGATTTTACTTATAAATATTCGTGAACTATGTTTGTCCTATACTTTCTTTAGGGGCATCTAAATCATTCGAGTTTATTACTCGTCTGGAGATATTGTTCTTCATATTAATTATTTATAGCTTTTTATATTATTATTTTTGGCTTTTATCTTTAATTCAGTGTGTTGTGGACATTTTTGATTTTATAAAAAGTTATTTATAAGTTTCCCGGTTTTTAGTATTAATAAAGGGCACATGTTTTTTAAGGAAAAATTCCATGAGGCGCTTGATCAGGGTTTCGCTACAAAATCAACATGCCATCGCGGCGATAAGTTTTGAAAACTGTCCAGCGAAAACCCGGATG # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACACGCGTGGGGGTGTTTC # Alternate repeat : GTCTTCCCCACACACGTGGGGGTGTTTC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACACCCGTGGGGGTGTTTC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 29709-31444 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADOEX010000006.1 Klebsiella pneumoniae strain SCPM-O-B-7848 6, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 29709 28 100.0 33 ............................ CCACCCGAACACCGTGCAGCTCAACCTGAGCAC 29770 28 100.0 33 ............................ TTTGCAACAATATACCACTTCCCGACCTTTGAT 29831 28 100.0 33 ............................ TAGGTTTTTGTTGTCTGATTGAATGGGTTGTCA 29892 28 100.0 33 ............................ TGCTTCTATTAACCTGTTTCTGTAGCTTAAACC 29953 28 100.0 33 ............................ TGATGTGGGAGTGTGGTGTAAAAAACTCTCTTT 30014 28 100.0 33 ............................ TCTTATGCACGGTGTTGGATACGAACCACTCCA 30075 28 100.0 33 ............................ TACCCCATTTCTGTCTTTTGTAAGCTCCATCAC 30136 28 100.0 33 ............................ TATTAATGCTTACGTTTCGTGGTTTGAGGATGA 30197 28 100.0 33 ............................ CGTCGTGAATTACGGCAATACGCTGGACCGCAA 30258 28 100.0 33 ............................ CAGTACCGCCAGCAGCGCCTTGATGCCATGTGG 30319 28 100.0 33 ............................ TTAACTATGCAGCGTAACCGTGCTTTCGTCTCA 30380 28 100.0 33 ............................ CTGCAAAAGCAAAATGTTGCTCTGTCAGGTGCA 30441 28 100.0 33 ............................ TATCAATCTCTGAAATCATTTTGTCTATTTTGT 30502 28 100.0 33 ............................ CGCGACGACCTCGTCATCCTCCCCGCTGCGGCT 30563 28 100.0 33 ............................ TACACCCAGCTCTTTGACGCAAAGGCTCAGGAG 30624 28 100.0 33 ............................ TCCTTGGTTCGTTTCTTCTGATGTTTGCAAGGC 30685 28 100.0 33 ............................ CTGGTTGACGTATGCCGTGATGCTGCTGGTAGG 30746 28 100.0 33 ............................ CATTCGAGTCAGTAAAAGCGTCTAGTGCTGACG 30807 28 100.0 33 ............................ CGCTGTATGCCCCCCATCCTTCGCAAGCACTAC 30868 28 100.0 33 ............................ CGATGACAACTTTGCCTACTTCGCTGCGCTGGC 30929 28 100.0 33 ............................ TTCCTCTTCTTCCTGACAATCAGCGCAGCGCTG 30990 28 100.0 33 ............................ TGCGGGTGGATGACAATAACGCCTGGCGCGCCG 31051 28 100.0 33 ............................ CCTGTTAAGGATGACGCGGGGAAATGGGTTATC 31112 28 100.0 33 ............................ TCGATGGCGAGCTGCTGGTGAAAAAGTCGATAC 31173 28 100.0 33 ............................ TCCAGGCCAGATCTGTTTGGGTTGGTGTCGAAG 31234 28 100.0 33 ............................ TGAAGGTGAGCGCCAAAAGGAGTGGAAGCATGC 31295 28 100.0 33 ............................ CGGCTGCGTTATCCGGCAGCACGAACTGGACCT 31356 28 100.0 33 ............................ TGACCTTAGAGGCTTCACTCAGTGCCACTTTTT 31417 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 29 28 100.0 33 GTCTTCCCCACGCACGTGGGGGTGTTTC # Left flank : TTTACAAAGAACGGCTCTGTATTGATTTGGCATTTTCACTCTCGAGGGAAATGGCGGGCCGCTACGATAAACACAAAGTCTCTGAGGCATTCAGAAAGCGAGTGATAGCCCTGGATTTGCTCAACCTGATTGCGGCCGATATCAATGAGCTGATGGGAGGGAAAGGTGCTCGTCGTACTGGCAAATGATCTGCCGCCAGCGGTGCGTGGACGAATGAAGCTGTGGTTTGTCGAACCACGGCCAAATGTTTTTGTCTCAGGCGTCAAAGATTCGGTCGCGCAAACCGTTGTTGATTACCTGTTGCAGTACACGCCTGTGGAATCAGGCCTGATGCTGTTTCGCAGTATTCCTCAACCGCCTGGTTATGAAATTCGCTACAAGGGTGAGGTCAGAAAGCCGATTATTGATCTCAGTGGGTTACAGCTGATTATTGAAACCCTAAAACTGTCGTAATACGTGGATATTGTGGTTAAACTCTCGCTCTTTCACAATATGTTGGT # Right flank : CTTGTGAGGGGTCTACCAGCATTGGCGTACTGGAGTCTTCCCTACACATGTGGGACTTAGCAATAAGCGGAATACTCGTATTAGAATAAATATTTTATAGCCAGCGAAACTTAAAATAATTTTTAGCTAATGAAACTGTCGTTTGGGAGAGGTAGGAATATTTTATTGCGAAAGAGAAGGGAACTGTTTAAAGCAATAACGGCGAATGATTCTTATAAAATGAAGGATAGGGAATTCATATGTTTCGACTTTACCAGTCACATGATTTAATACGCCAATTAAATCCTGAAGACTTTCAATATATTTTGACACCAGCAGGTTCGCTAAGAGAAGCGTGTATAAATTACGACCTCTCCTGTGAGGCGAATGGTCACAGCCTCGCTTTTGGCTTACCGAAGGAAATATACAACTCATCTCCACATAAAAGGCCATATGAACGAAGGCAACGTAGCTATGCAGATCCTATCTATGATGAGGTAGAGCACAGGTTACAAATTGGC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACGCACGTGGGGGTGTTTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.50,-10.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [63.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //