Array 1 304494-301790 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCHC010000004.1 Eggerthella sinensis strain DFI.5.73 JDOONOLP_4, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ===================================== ================== 304493 33 100.0 34 ................................. ACCGACAGTGCCATGAAGCACATCGGGCGCATCA 304426 33 100.0 34 ................................. ATATACTATTTGAACCGCTACATGCGCGAGAACA 304359 33 100.0 33 ................................. GCTTACCCTAGCTCCTAACTACGTATGGTATCG 304293 33 100.0 33 ................................. TTCTCGTGGCTCGGCGCGGACATGTCGAAATAC 304227 33 100.0 35 ................................. AGGAAGATCACTATAACGGAGACCATCAGGAGCAT 304159 33 100.0 33 ................................. CTCGTCATCGGTCAGATAGGCGCACAGGTAATG 304093 33 100.0 34 ................................. ATGTCGATGCGATCGATGAAGCGGGCATCACGTT 304026 33 100.0 34 ................................. CTTGATTTCTGACGGGGAATCTGTGATATTCGAT 303959 33 100.0 33 ................................. CTGGGCGTAGCCCGACCGTGGGCCAGGGCGAGG 303893 33 100.0 34 ................................. TGCTAGAGGCGAATCATGGCGAAGTTATAGCCTA 303826 33 93.9 33 .........T........G.............. TTGAAATCACGTATATGCCTCTGCTGCAACAGG G [303812] 303759 33 93.9 35 .........T........G.............. TAACGGCGAGAAGAAGTACTGGAACCTCATGCGAA 303691 33 93.9 34 .........T........G.............. GAAGCTGCGGGTAATGCTGGTTCTTTTGCCCTCG 303624 33 93.9 34 .........T........G.............. ATCATCGCCTGCCCCCTTTGCCGCCTAAAGAGCA 303557 33 100.0 33 ................................. CCAATAACTACACTGTCTATGGGACGATTGGTG 303491 33 100.0 34 ................................. TGAGCCGCCGCTAAGTCGGGAGGGTGCCGGAACC 303424 33 100.0 35 ................................. AAGATGGTGCTCAATAAGCTACAAATTGAAATCAT 303356 33 100.0 33 ................................. CTTGACGTACAGCCATTTAAACGGGCCGTAGAC 303290 33 100.0 32 ................................. TCGACCCGACGAGCAAGCGCGATTCGGGCCAG 303225 33 100.0 33 ................................. ATCACGGGTGCGGAGTATTCCAGCCCCGAAGCC 303159 33 100.0 34 ................................. TCAACGTCGGCGGCGAAGGCGAGCTGCTCGGCGG 303092 33 100.0 35 ................................. CGAGAACGGCTTGTCTATGGGGTCGCCGTAGCCCG 303024 33 100.0 33 ................................. TGGCTGTAGTCGTCCGATAGATCCTCGACCTCG 302958 33 100.0 34 ................................. AAACCTGCGCCAATCGTCCGCTTCCGCGTCAACC 302891 33 100.0 33 ................................. ACGCGCGCGTCGAGCGAAGCAATGGCGGTCGAG 302825 33 100.0 34 ................................. TCCTTGTCGGTGCCGAGCCCGATGTAATCCCAAG 302758 33 100.0 33 ................................. TCGTTGAGGCCGTAATACTTCTCAACGCACAGA 302692 33 97.0 35 ......T.......................... TGCTCGGGGTGATGGCCGTCTGGCTCGTCTCCATC 302624 33 100.0 34 ................................. TTGATGGGAAGAACGTTCGACGCGCTGAACCCGA 302557 33 100.0 33 ................................. TGGCCGAATTTGCTGGATGCGTGGGACTTCGCG 302491 32 97.0 32 ..................-.............. TAAGCATGTGCGGGTGATTTTCGTCTGGCCTA 302427 33 100.0 33 ................................. CAACGTACACGTGTGCATCACCAAACCGATACC 302361 33 100.0 34 ................................. ATCTTTGATGAAATCAACGTTTATTGTAGTGAAG 302294 33 93.9 34 ........T.........G.............. AACGACGTGCAGCTGCGCCCCTACGACCTCGCCG 302227 33 97.0 33 ..................G.............. ACGCCGTCCACGCAGGCTTCGGCCGCATCGCCC 302161 33 93.9 35 ...G..............G.............. GGCTCGTATCGGTGGTTCCAGGCGTCGTCGGCCTC 302093 33 97.0 32 ..................G.............. ACGACGACGCCGACGTTACGAATCCCCTGCTG GG [302072] 302026 33 97.0 33 ..................G.............. TACAGCAACCTTTGCCACCTCAAACCAGTCATC 301960 33 97.0 37 ..................G.............. CCTATACGAACATTGGCACCGCTAGCAGCCTTGGAAC 301890 33 93.9 35 ........T.........G.............. CTGGTCTAAGGGTCGCTCGATCCACGCCCAGGCTT 301822 33 97.0 0 ........................T........ | ========== ====== ====== ====== ================================= ===================================== ================== 41 33 98.4 34 GTCACTCCCCGCAAGGGGAGTGCGGGTTGAAAT # Left flank : TATACGAGGCGATTTGGACGGCTACCCGCCGTTTCTGTGGAAGTGAGGTTTGGCGAAATGCTGACGGTTATCACGTACGACGTGAACACGGAAGATCCGGCGGGGCGACGACGGTTGAGGAAGGTCGCGCGCCACTGCGTCAACTACGGCCAGCGCGTGCAGAATTCGGTGTTCGAATGCGTAGCCGATGCAGCAGAGATGGTGCGCATCAAGAGCGAGCTCGTTGAGCTTATCGATCCCGAGAAGGACAGTTTGCGGTTCTACCATCTGGGCAACAAGTACCAGACGAAGATCGAGCACGTCGGCGCGAAGCCGACGTACGAAGCTGAGGGGTTTTTGGCACTATAGCCTGGTGCGAACGGGAGGCGAACATGGTCCACAAGGGAGGCTCGCACCGGATTCGAGCCGTATCTCGCAATCTAAGCGACGTCGACAGCGTTGAATGTTTATCTTTGCTACTACATAGTGGCAATACGATTACCAATACGCAAAATATTGCG # Right flank : GCAGGCTTTAGCCTGTTGAGCACGCGAAGCGTGCGAGATATACACCACCCGCTATGCGGGTGCGCGACAGACGTTTATACGAAATCACCTTCCTCCTACAATGGCGATTGTTCAGGCCGCCATTCAGAGGAAGGTGATCTAATTTGGCGCAACAAGCACACAGCCTGTCGCACACGAAGTAGATGTGCAAGTACCACATCGTGTTCGCGCCCAAGTATAGGCGCAAAATTATCTACAATCAATTGAGGCCGAGCATCGGGGAGATACTCAGGAACCTGTGCAAATACAAAGGCGTCGAGATAATAGAAGGGCATCCCATGCCGACCATGTGCACATCCTGGTGAGCATTCCGCCGAAGATAAGCGTGTCGAGCTTCATGGGGTACCTGAAAGGAAAGAGCTCCCTGATGGTCTTCGACAAGCACGCCAACCTCAAGTACAAGTTCGGCAACAGGAAGTTCTGGGCCGAGGGATACTACGTCGGCACCGTGGGACTGAACG # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACTCCCCGCAAGGGGAGTGCGGGTTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCACTCCCCGCATGGGGAGTGCGGGTTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.30,-9.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [12-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //