Array 1 9748-10427 **** Predicted by CRISPRDetect 2.4 *** >NZ_UNQJ01000035.1 Propionibacterium australiense isolate Propionibacterium_australiense1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 9748 36 100.0 35 .................................... ATGTCGAAGGAGATGCGATAAGTTTCGGCGTCTGC 9819 36 100.0 35 .................................... CTACCACGCAGTAGCCTAGATTCTCAGCAAGTCAG 9890 36 100.0 35 .................................... CATTCCGGCGCTTGTCAGGAGCCCGGTGATCGTGT 9961 36 100.0 35 .................................... TCCCTGATCGTGGCTACGCGCAGCTGCGCGAGCAC 10032 36 100.0 36 .................................... ATGTACATCTCCGACGAGTTGGAGGGACGGTGAATC 10104 36 100.0 37 .................................... AGCGTCTGGATACGCTCCATCGCCTCGCGGATGTCAA 10177 36 100.0 35 .................................... ACGTCGGTGTCCTCCGAAGCCGACGTTTGCAACAC 10248 36 100.0 37 .................................... CTGCACACCTTGTCCGCGCCGTCCCTGACGGCACGAC 10321 36 100.0 35 .................................... CGGTATAGGGTCGCGTCGTGTGCTTCAACCTCCTT 10392 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ===================================== ================== 10 36 100.0 36 GTTTCCCCACCTGAATAGGTGGGGCTCCATTGAGGC # Left flank : GATCCGGGTGCGCCCTTCCTAGACCAGAGCGCCGAGAATCCCACACGAACTCGCGAACCGATGAAACATTCCCGGACGAGGCGGCGATGACATCAGCAACAGCCCGCTGATGGACAGTTGCCGTCCACTACCGTCTCGATACTCCCCACCGCCCGACGAAACCATTGACATGTTCAGTGCATGGCGCCAGAGGTGGTGCTCGCCGCGGACTGGTTTCCTTCGATGAGGAGAGAAGCAGTAGTTGCCGTTGACCCGGCTCAGGAGAGCGTGACGGCCATGGGACCGCATCGAGAAGCCATCTCCATGTAGGATGATGTCGACGTGGGGGCCGGTGCGAGAGCTGGTGTCCCGCCGCCGCCCCGCGTGAGCGCTCGCACCCTTGTCAGAGCCATGTTCATGTTGACAAGACCATAGAGACGCCTTACGATCCTGACAAGAACGGAGGAGCACTCGCAACACGAAGCATCGCCGCTTGTCAGCCCCTACAAAATCTGGCAGCC # Right flank : | # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCCCACCTGAATAGGTGGGGCTCCATTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.40,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [40.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0.37 Confidence: LOW] # Array family : NA // Array 1 55506-55106 **** Predicted by CRISPRDetect 2.4 *** >NZ_UNQJ01000016.1 Propionibacterium australiense isolate Propionibacterium_australiense1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================= ================== 55505 36 97.2 37 ...........................T........ CGGATGGTGGGGCGCCGGCCGTGCGGCCAGGCATGAG 55432 36 100.0 35 .................................... ACGTCGGCGGTGGTCACCCCGAGCTGCTTGGACAG 55361 36 100.0 39 .................................... GGACACCGGAAGGCTCGTCGCGCCGGCGAACTCGGCAGA 55286 36 100.0 36 .................................... TTGGCACCCTGGTGAGGGGGAGAGTTCTGTCACTCT 55214 36 100.0 37 .................................... GCCCAAGCCTCCTCGGAGGCGTTGTACTCGAGGCCGA 55141 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ======================================= ================== 6 36 99.5 37 GCCTCAATGGAGCCCGGTCCTTAGGACCGGGAATAC # Left flank : | # Right flank : GGCTCGCCAGTTACGAGGCTGCTGACTACCAGTGTTGCATACTTTTGCGAGCGCTGCCACTCGGCGCCTCGTTGGACAGCGGGAAGCACTGCATGAACTGGCCAGAAACCGGTCCTGGCTAGGGTGCGAGCACTGTCGAAGGGGCTGGTCGGTATCAGAGCGCTCGCTAGACAATCTGGGGCCCTCGTGTGGGAAGCAGCCTGCGGTGACCCACGAACGTGAACCGGTCTCCACTGGGGTCGCCCAAATCAACGATCACCACTGAGTCTACAGCCAAGTCCATGATATCCTCACTGTCCGCTTGTAAATGGATGAGTTCTGTCCTAGTTAAGTCGCAGACGAAAACGGAATACTGAAGACGTTCCCCGTTGGCCTCCATCAGCTTGCAGATTCGACGAAGTCGCGTCTGGTTACGAATGTCATAGGCTATCAGATATCTTCTCCTTCTCGTTTTCATCTGGTCATCATCGCCGTGTACTGGTCGAGTTCTCCGATCATGA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCTCAATGGAGCCCGGTCCTTAGGACCGGGAATAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-15.30,-15.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [41.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,0.74 Confidence: LOW] # Array family : NA // Array 1 58539-58861 **** Predicted by CRISPRDetect 2.4 *** >NZ_UNQJ01000015.1 Propionibacterium australiense isolate Propionibacterium_australiense1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ===================================== ================== 58539 36 100.0 36 .................................... GATTTCAATGGGAATGAATCAGCGGTTTTCGTACAG 58611 36 100.0 36 .................................... TCGACTCTTGGACGACATCTCCCGCCTCCGCTTGTC 58683 36 100.0 34 .................................... TCGGAGCCGGTGCGCCACTCGCGCGGCACGACAA 58753 36 100.0 37 .................................... TTACTCGGCCTGCTTGTAGCGCTCCCGCCAGTAGCTG 58826 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ===================================== ================== 5 36 100.0 36 ATTTCCCCATCTATTCAGATGGGGCTCCATTGAGAC # Left flank : GAGAGATCCCTGAGTACAAGCCCTTCGTGACGAGGTGAGGAGCATGGCGAGACGCCGCTATCTGATCGCCTATGACATAGCGAATCCGAAGAGGTTGAGGGCCGTCGTCAAGCTGATGGAGGACTTCGGCACTCGCTTGCAGTACTCGGTGTTCCTGTGCGATCTCAGGCGTGCTGAGCTCGCGGTCTGGCGTACGGCCTTGACGGACGTTGTCGAGTTGAAGGAGGACTCGGTGGTTGTCATAGACTTGGGGGCAGTGGGTGCGACCCCGATCGAGGTCATCGGTCTGGCGAGGAACCTTCCCAGCCAAGGAGCTGTCGTCGTGTGAGGCCTGCGAGAGATCCTGCCCCGCCGGTGCCCCGCGAGACCGCTCGCAGCCTTGCCAGAGGCCTGTTAGCGTTGACAAGACCATAGCGATGACCTACGATCTAGGAGTGCTGGTGGGGCCGCTCGCAATCGGGTTCGTTTCCCCTTGTCAGATGTCACAAAATCTGATAGCC # Right flank : | # Questionable array : NO Score: 3.06 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTCCCCATCTATTCAGATGGGGCTCCATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.40,-9.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [45.0-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA // Array 1 85725-84527 **** Predicted by CRISPRDetect 2.4 *** >NZ_UNQJ01000011.1 Propionibacterium australiense isolate Propionibacterium_australiense1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 85724 36 100.0 35 .................................... CCGGTGAGGGTGGGGGTGATTATGGTGCGGGCATG 85653 36 100.0 36 .................................... GCGACGATCACCTCCACACCCCCTCGTGGGTGGCCT 85581 36 100.0 36 .................................... TTGGTAGCTGAGACCAAGATCATCCCTCAAAGAGTC 85509 36 100.0 37 .................................... TTGCTCGCAATGGTGTTGTTGACCAGCTCGTAGAGCC 85436 36 100.0 37 .................................... TTCTTTCTTCTGGTTGTTGACGTCGTCGACGACCCAC 85363 36 100.0 36 .................................... CCACGCGCTGATGCTCTCAGCAAGCGCCTCGCCCAG 85291 36 100.0 37 .................................... GAGCACTCTGACCTGCTGTCCCGCGAGGGCTGGGCGC 85218 36 100.0 37 .................................... CATCTTCCAGGACGTGTACGAGTGGGCCGGTGAAGAG 85145 36 100.0 37 .................................... CCGGTGACGTGACTGCCCCGGACGCAAATGATGCATG 85072 36 100.0 36 .................................... GTGGACAAGGTGAAGGAGTGCGGCACGGTCCCGGAT 85000 36 100.0 36 .................................... ACAGCCGACACGGCGTGCACGCGACGCTCTTCTACC 84928 36 100.0 36 .................................... ACAGCCGACACGGCGTGCACGCGACGCTCTTCTACC 84856 36 97.2 37 ........................T........... GAGGCGCTCCTCGGTGACATGTGAGCGTCCGTGCCGT 84783 36 100.0 34 .................................... GTTGACCGCGGCGGCTAAGACCGCGCAGTGGCGG 84713 36 100.0 42 .................................... TTCAGCTGTGTCACCACGGCTGTATACCGATCTGATGTACAG 84635 36 100.0 38 .................................... TTGCTGATCGCAACGTGCGTGTGCAGGTCGGGGTCACC 84561 35 94.4 0 ..........................T-........ | ========== ====== ====== ====== ==================================== ========================================== ================== 17 36 99.5 37 GTTTCCCCACCTGAATAGGTGGGGCTCCATTGAGGC # Left flank : CTCGGCGTCGATCCCGGACCGAGACGGCGGCAGGGCCAGGACTGTCTTGAGGTCTTCCTTCTGGGTGCGGGTGAGTTTCGCGGCGTTCTGGTTCCCCGCGTGCCCGGTCAGCACCGAACACATCCTGCTGGCCTGCCACTCGGCCAGCCATTCTCGAACGGTTTTCTCGCTGCGCTCAACCATTTCAGCGATAATCCCCACATCGACACCACGAGAGGCATACAAGATGGCTTCGGCTTTCATCCGCACAAGTACGTAAGTGTCTGTGCGTTTCTTCCATCTGATCAGGACAGCGGTTTCTTCCGGGGTGACCTCGATCTGCATGTCTCAATCATATCCGAAACAAGACCCCGAATCCATCAAAAATACGATTTCGTTTCATGACGGCCATAGCACGAC # Right flank : GTGCAACTCACGGCCAAGAAGATCGAGAGCCCGGAGGGTTTCCCCTGGGTCTCCGTGACGCTGCGCCCATTGCGGACAGCGCCGTGGCTGATCTGGTCAGTGTCACTCCCCCCTGGGAGACGGTCATCGTGCCGATCACGCCGGAGTCTTCCAGCCTCCGGGCGGCAGCGCCACCTCGCAGAGTCACCACATACCATCCGCACCGTGCCGCCTGACCCCGGGGCGAGCACTCGCGTCAGGGCATCGAAGGCCAAGGATGAAGAGGGGCCGCGGAACGATCGTTCCGCGGCCCCTCTTCCGGTTCTGCTCAGCCCTGGTGGGCCTTGCGGGCCGACCAGGCCGAGGCGACCATGTCGTCCAGGCTGTTGCGCATCTTCCAGTCGATGTCGCGGGCCGCGAGTTCACCGCGGGCGACGATGCGGGCCGGGTCGCCGGGGCGCCGGGGCGCGATCTCCGGGGTGAAGTCGATGCCGGTGACGCGGGCGATGGCCTCCATGATC # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCCCCACCTGAATAGGTGGGGCTCCATTGAGGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [9,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-11.70,-12.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA // Array 1 712-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_UNQJ01000018.1 Propionibacterium australiense isolate Propionibacterium_australiense1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 711 29 100.0 33 ............................. TGACTGGCACGGACGGCACCCGAAACGCCGGTG 649 29 100.0 33 ............................. GACGCCTAGCGGGTTGTTCCAGCTCTTCTGCCG 587 29 100.0 33 ............................. CTACGACATGCCCAACGTGCGGCTGACGGCCGG 525 29 100.0 33 ............................. CGCTCGTTCCTTAATATAATCACGAACGGCGTT 463 29 100.0 33 ............................. CTGTCGGGAGCACTCCGTGAGGACTCACTGAAT 401 29 100.0 33 ............................. CCACATCTCCGCGCTCTTGGCCAGCTCAAGCAT 339 29 100.0 33 ............................. CGATTGAAACCGTTGAAGAGGCAGTCGAGTTCC 277 29 100.0 33 ............................. CTCTAAGCGGAGCCCGCGCGGCAGTCAAAGCAG 215 29 100.0 33 ............................. CAGACCGGCAGCTGGGGACTGGATGTCCGCGAA 153 29 100.0 33 ............................. GCCTGCTGCCAGCATCGCTGACGCCCACGGCTC 91 29 100.0 33 ............................. CGCGGTCCTCGAGGTGTACGAGCTGTTCTTGAC 29 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 12 29 100.0 33 GAATTCCCCGCGCCACGCGGGGGTGAGCC # Left flank : CATGGTGATGAAGATGCTGAATACGGCTGGGACGTTATTGAGCTCTGGGATGACAAGATCGGGGTAGTCGCCGGTGGGCAGCAATGGGGGTGATGGGTGTTGGTTGTTCTTGTCCTCACTGCATGTCCTGCAAGTCTACGCGGACATGTGACTCGATGGGTGCTCGAGATAAGTCCTGGAGTTTTTGTTGGGCGCATGCCAGCCAGAGTTAGAGACGAGTTGTGGGATCGCGTCATGGAGCTCTGTCTGGATGGACGGGCTATCATGGTAATCTCGACTCGTAACGAACAAGGATTCGATTTTCGAGTCCACAACCACAACTGGGAAGTGATCGACGCTGATGGGCTACGCCTCATGCGCCGACCGTCTCAGAACAGCAATGGTGCCAACCCGATGCGTAGGGGCTGGAGCAAGGCCTCTCGCTACCGTAGGGCAGTCAAGCGAGGCCGAGGCTGAGCTATACTTCATCCACAAGCTGGTGAATGGGCTAGCCAGTTAGG # Right flank : C # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAATTCCCCGCGCCACGCGGGGGTGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-13.40,-14.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.74 Confidence: HIGH] # Array family : NA // Array 1 1465-1188 **** Predicted by CRISPRDetect 2.4 *** >NZ_UNQJ01000053.1 Propionibacterium australiense isolate Propionibacterium_australiense1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1464 29 100.0 33 ............................. TTTGGCCGCGGTTTTGGCGTGGTTTGACGCGTC 1402 29 100.0 33 ............................. TTTGGCCGCGGTTTTGGCGTGGTTTGACGCGTC 1340 29 100.0 33 ............................. TCCTTTTTGTGGCCTATTTCCATGCCGGCGATC 1278 29 100.0 33 ............................. CACGGCGGCGGCCAGCGACAAGACGGCGCTCAG 1216 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 5 29 100.0 33 GAATTCCCCGCGCCACGCGGGGGTGAGCC # Left flank : | # Right flank : CAGCTGGTAGCAGCTGTGGAGGCTGAGGCGGCCTTTCCCGTGAAGCCTGCGTCGAGGCCACGAGTAACGTGAGAATACCGGTTGCTTGACGCTCACCCGAGCGACTGTATACCATCGTGACAGATGGGGACACCTCGACAGCGTCGGGGCGGAGTTCCACATCTTTTCTTCGGGAACCATGGTTCCTATCGGATTCGTGCGCGTTCAGTTGTGTCCGCGCCTGGGTGGGTCAGCCCTCTGTGCCGGGCTCATCTGGTTCTACCGCCTCTGTGGTGACCTCCAGCAGATCGCCGACGTCGCAGCCCAACGCCTCGCAGATGGCCACGAGCGTTGAGAATCGAATGGCCTTCGCCCGGTTGTTCTTCAGCACCGAGAGGTTCACGACGGTGATGCCGACCTGTTCGGAGAGCTCCACGAGCGTCATGCCTCGTGCCTCCAGGAGCAGGTCCAGGTGACAGACGACGTGTGGGTCGGGTGACGGTGCGGCGCTCACAGTGCCA # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAATTCCCCGCGCCACGCGGGGGTGAGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-13.40,-14.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [33.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.74 Confidence: MEDIUM] # Array family : NA // Array 1 3016-3348 **** Predicted by CRISPRDetect 2.4 *** >NZ_UNQJ01000039.1 Propionibacterium australiense isolate Propionibacterium_australiense1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 3016 37 97.3 36 ....................................T GATCCTGAGCTGGTCACCCTGATCTCAGATGCCGCG 3089 37 100.0 38 ..................................... TGGCGGAGGCTCTGGTTCGCCGTTGGCTCATATGAGTA 3164 37 100.0 38 ..................................... TGGAGGACCTGCTCGGAAACCCTGAGTACTGGGAAGAA 3239 37 100.0 36 ..................................... CTGTGGGAGAGAACCAGGCAAGAGGCTTCGACCCGT 3312 37 97.3 0 ...................................C. | ========== ====== ====== ====== ===================================== ====================================== ================== 5 37 98.9 37 GTCTCAATGGAGCCCCATCTGAATAGATGGGGAAATC # Left flank : AAGACTCTGACTCGTACTCCACATCGAACAAGATCTTCACCACGTCACGCAGGGCCGGAACATCCCAGAACTCTGCGTCGATACCGGACCGGGAAGGCGGCTGGGCCAGAACCGTCTTGAGGTCTTCTTTCTGGGTGCGGGTGAGTTTCGCCGCGTTCTGGTTCCCCGCGTGCCCGGTGAGTACCGAGCACATCCTGCTGGACTGCCAGCCGGAAAGCCACTCCCGAACAGTTTTCTCGCTGCGCTCGACCATTTTCGCGATGATTCCCAGCCCGACTCCTTCGGAGGCGTACAGGATGGCTTCGGCTTTCATCCGCACCAGCATGTAATTGTCTGTGCGTTTCTTCCACCTGATTAGAACAGCGGTTTCTTCCGGGGTGACCTCAACCTGCATGCCCCAATCATATCCGAAAACAAGACCAGAAATCCATCAAGAATACGGTTTTGTTTCATGACGGCCATAGATGGGAAAAGAAATGATTCATGGCCGAGCACCAGGT # Right flank : CTGACTCGTGCCACTTTTGGTTGGTTGGTGGGTGTTTGTGGGTGTTTTGCCTGGTGAGAGCGGGGTTGGTTAGTGTGGTTCACACACTAATCGGGTTGTTGGAGGGGTGGTGTGGCGTACGTTCGGAAGGTGAGAACGGCTTCGGGTGCGACGGCTGTCCAGATCGCGGAGTATCGGGATGGGCGTGACCGGGTGTTGGAGCATCTCGGGTCGGCTCACACCCCTGAGGAACTGTCTGCCCTTGTCGTCGCGGCGAGACGGAAGCTTGCGCCGTTGCAGGACGAGCTGGACTTTCTGTCACCGGCTGCGGCCTCGAGGTCGTTGACCATCACTGACAAGCGTTCGACCGCGTTATGGGACAGCCTGCGCCGTGTCTATACCGATCTTGGTTTCGAGGTTCTCGCAGATGACGTGTTCGCCCAGCTGGTGTTGGCGCGGGTGATCAAGCCGACCTCGAAGGCCGGTAGCATCCGCGAGCTCGACTCCTTGGGGATCCCGCA # Questionable array : NO Score: 3.01 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTCAATGGAGCCCCATCTGAATAGATGGGGAAATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.40,-12.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 2 5305-5045 **** Predicted by CRISPRDetect 2.4 *** >NZ_UNQJ01000039.1 Propionibacterium australiense isolate Propionibacterium_australiense1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 5304 36 100.0 41 .................................... CATGATCACATCGGACAACCAGCGGACGGAATCCGTGGCCT 5227 36 100.0 37 .................................... TAGCCGATTTCGCGGAAATAGTAATGCTGGACGATGC 5154 36 100.0 38 .................................... TACTGCGGCGCCACACGGAACAGCGACAGCTGACTGAG 5080 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================= ================== 4 36 100.0 39 ATTTCCCCATCTATTCAGATGGGGCTCCATTGAGAC # Left flank : CCATGCCCAGACACTGATCGTGGACGGCACCCTCGTGCCCTGCTGGGACTGCAAACACACCCAGGGCCCGTACTCGGGCAAGCACCACACCCCCGGACTGAACCTCCATATCGCCAGCACCCTGACTGGAAAACTCATATGGGTCGGATCGACCCACGACACAAAGGCTCTACAACTGATCGGTTTTCTTGACATTTTCCCGGACACTCCGCCATTGGGTGACAAGGGCTACATCGGGCTGGGTATGACAACCCCGATACGCGAACAACCAAGGGGCGGGCTCACAGGCTGGCAGAAAGAATACAGCAAAACCATCAATTCGCTACGCGCCCCGGTCGAACGAGCAATCGCCCAAGTGAAGACCTGGCGGACACTCCACACCGGCTACCGCAGACCCCTACACACCTTCCCGCAAACCATCACAGCAGCCACAGCACTAGAATTCTGCAAAACAGTTTTGAATAACCCTCCGGGTGCGGTGACCAGGGCGGCCACGTCGA # Right flank : ACGGGTCGAACCCGACTCGTGCCACTTTAGTGTGGGGGCCAGGTGAGGCCGAGGGTGTCGAGGATGGTTTGGGCTGCGGGTGTGATCTGGTCGTGAGCGTGGAGGGTTTGGCCAGCGATGTTGACGTTCATTTCATGGATTGGCTCGAGTGTTTCGATGATTTTGGCGACGGATTTCCCGGTGATTGTTTGCAGGCGGTGTGAGACGGCGAGTGCGGCCATCACGATGGTGAGGTGGGCTTCGATCGCCTCGCGGGTGTGATGGAAGATCGGGCGGGCTTTCAGGTCGCTCTTCGACATCCTGAAGGATTTCTCGATTAGCCAGAGCTCGTGATAGTCGGCAATGAGTTCTGCCGCGGAGATTCGGGTGGCGGGCATGTTCGTGACGTAGCCTTTCAGTCCGACCAGTCGATGAGCCCGATCGAGAGCTTTCTCATCGAGGATTTTCTTGCCTTGTAGGGTTTTCACGAACCGCGGACTCTTGACTGTCTTGGTGCCGTT # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTCCCCATCTATTCAGATGGGGCTCCATTGAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-9.70,-10.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [33.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.64 Confidence: HIGH] # Array family : NA //