Array 1 9107-10172 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAATV010000044.1 Enterobacter asburiae strain 5832 Ea-5832_contig44, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 9107 29 100.0 32 ............................. AAGATATCTCGTTTTGCTCATAGCGTAGGTGG 9168 29 100.0 32 ............................. GGTGGCTGGGAGACTGCAAGCGACGAAGATAT 9229 29 100.0 32 ............................. ATCTGCGCGCTGCCGGTGGCGACACGCGTCAC 9290 29 100.0 32 ............................. TCAGGCTTTAACATTTATATAGTTTCCCTATT 9351 29 96.6 32 ............C................ GGGTCGTCTAAGCCGCTGGTCATGACCGGGAT 9412 29 96.6 32 ............C................ GGATTACCTGTGCCGCAATCCAGCCCTGGTGG 9473 29 100.0 32 ............................. TTGTTTTAATGGAGGCGAATCCCGATAACTGG 9534 29 100.0 32 ............................. TCTCCGCGCCTCCATGCGCTTACAGCGCATCT 9595 29 100.0 32 ............................. TGCCAGCGGTTCATTGTCAGCTTGTCGCGCGG 9656 29 100.0 32 ............................. TGAGTTGTTTGGCATATAAAGACCCTATCATT 9717 29 100.0 32 ............................. GATTTACTCATTTCAATTATTGAAATGGTAGG 9778 29 100.0 32 ............................. AGAAACCGTATATCGCAGCCGCGGCCGCTGGA 9839 29 96.6 32 ............C................ AGACTACCCCTGAAGTGCTGAATTTCATCAAG 9900 29 96.6 32 ............C................ CGTGTGCCGTCCAGCTGGCGCCAGCTGGTCAA 9961 29 93.1 32 ...........AC................ TCAGCAAATCGTTCGTTGCAGCGCTTCTGCGC 10022 29 96.6 32 ............C................ TTCCCTCCTCGTTTTCCTGTTTTTTACAACAA 10083 29 96.6 32 ............C................ GTGAGGAGTTCAGATTGTGTTCGAATTTAAGT 10144 29 75.9 0 A........A.A.C........A.GC... | ========== ====== ====== ====== ============================= ================================ ================== 18 29 97.1 32 GTGTTCCCCGCGTGAGCGGGGATAAACCG # Left flank : GGTTCTTGCTGCCGGAGAGATTGCGCCGCCGCAGCCCGCAGCGGACATGCTTCCGCCTGCCATTCCGGAGCCGCAGGCGCTCGGAGATGAGGGGCATCGGGGAGGTGGAGGATGAGCATGGTCGTGGTGGTTACCGAGAATGTACCGCCTCGTTTGCGTGGCAGGCTGGCCATTTGGCTACTGGAGATCCGCGCAGGGGTATATGTCGGTGATGTTTCGAAACGGATACGTGAAATGATCTGGCAGCAAGTGACGCTACTGGGTGGTGAAGGCAATGTCGCAATGGCCTGGGCCACGAATACCGAATCTGGTTTTGAGTTCCAGACCTGGGGGGAAAACCGTCGTATTCCGGTAGATTTGGATGGTCTTCGATTAGTGTCTTTCTTTCCTGTTACTATTCAATAGGTTACCTGCTCTTTAACATTGTATATTTGTGATCGATATGTTGGTAGGATGTTTTTTCTGTGTAAGTTGTTGATTTATAAGATTGTATATTTAGT # Right flank : GCTATTTCCCCGCTTTTGCCAGCTCCTTCACCAGCGGCAGCATCACCTTCACCACATCACGGCTGCGGTGCTCAATTCGCTGCGGCAGTGCGCTGTCGATGTGCTGCTGATTATCCAGCATCACGTTGTGCCAGCTTGTCCCGTCCGGGAAGGCCTTCGTTTTCGCCCGCTGCTGGTAGCCATCTTTATTGCCCAGCGCCCAGTTTGTCGCTTCCACGTACAGCACCGGAATGCCCGCCTTATCGAACACTTCGCCGTCGTTGCAGCAGCCGGTGCCTCGCGGATAATCCGGGTTCCCGCCGGGATTACTGGTGGCATAAACGCCATGGCTGCGGGCAATGGCCAGCGCCCGGTCGCGCGTCAGTTTTCGCACGGTACCCGGCGTACTCTGCCCGCTGTTGAAATAGAGCTTGTCGCCGACGATCAGGTTATCGAGGTTGATCACCAGCAGCGTATTTTTCTTCTCCTCTGCGCTCATGCGCTTAAGGAGATTCTCAGCG # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.94, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGTGAGCGGGGATAAACCG # Alternate repeat : GTGTTCCCCGCGCGAGCGGGGATAAACCG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTGAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 15105-14536 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAATV010000030.1 Enterobacter asburiae strain 5832 Ea-5832_contig30, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 15104 28 100.0 32 ............................ AGGCACTTCAGCCGCTACTGGATGACGGACGG 15044 28 100.0 32 ............................ ACGCAGCCAGTGGCGGCGGCCTACGATATCGA 14984 28 100.0 32 ............................ TCCCCGCGCGGCCTCGACGTACACCGCAGCAT 14924 28 100.0 32 ............................ TTTGAGCTGTATGTCAGCCTCCGTATCAAAGA 14864 28 96.4 32 ......C..................... TCACGGTCGCGAGCTTTCGGAGACCTGTTATT 14804 28 100.0 32 ............................ CTTTAAATCCATCGTCGCATAGACGGGAGGGA 14744 28 100.0 32 ............................ GGTCGTGTCGATGCATCCACCGTTCGGGCCAG 14684 28 96.4 32 .............C.............. AGAGAGGCTTGAACATCCTGCTGGTGGCTGCT 14624 28 92.9 32 .............G......T....... GCCCAATGAGCAACATCGACAAACGCGCTTTT 14564 28 96.4 0 .............C.............. | C [14539] ========== ====== ====== ====== ============================ ================================ ================== 10 28 98.2 32 GTGCACTGCCGTATAGGCAGCTTAGAAA # Left flank : ACGGGCCACGCGTTCGCTTTCATCCGGCGTCAGCGTCCGTCCCGCGCTTTTGCGGCGGGCCACGTTACGTTCGTTAATTCCGGTGACGCGCAAAATGTCCGCTTTCGACATCGCCGTCCACTCATGAATGTTGTCGAGGACGCTGACGGGTAATCCCTGATTGAGAAACTCAATCAGCCGCATCCCCCTGTTTGCAGGTAAACCGGCGTAGCGCCAAAGCGCGTTATCAGCAGGTTGCTGGGCGGGGATCCATGTTCTCATGTTACCTCCGGATTGATGTCATTTGTCATGGTTAAGTATAGTCATTTGTCAGGTAGAGTGGAATGGCGTTTTTTTATACTGGGTGGTTTGAGAGAAGAAGGGGGTTTGACCCTAATTTTTAGAGTGTTTGTAATGCATTGATATTAAATGGATATTTTGAGAGGGTAAAAAAGAGGGTAAAAGAAGGGATTTTAGCTTTTTTTGTATGAAAATCATAATGGTGTGGAGATATTATTTCA # Right flank : ATAGAAAATAAGGTCTCTCCCCCTTACTTTCTAAACTGTCGAACAGACAGCCTGAAACGAACCGCCAATTAATTGTTCAAATAATCAACTGCACCACAAAAAAATAAGACCGGGAAAATCCCGGCCTTATTTAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATGTAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTATTAGGTAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGATTAAAACGCAGCAAAACAGTTTCGGCGCATTGCCCA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : GTGCACTGCCGTACAGGCAGCTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 25145-24635 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAATV010000030.1 Enterobacter asburiae strain 5832 Ea-5832_contig30, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 25144 28 100.0 32 ............................ TGAAAGAACAGAACGAATCGACCGGCGAACTG 25084 28 100.0 32 ............................ ATTAAAGCAGTGCTTGTTGATATAGATAAAGG 25024 28 100.0 32 ............................ TCGTCAGTATCGTCAGGCGCTTCCGAGGGCTT 24964 28 100.0 32 ............................ AGTCCCGCTGAGGGTTTTGCATAATCTGGTAA 24904 28 100.0 33 ............................ GGTGCCGTTAATCGCGCAGCAGAAGCAATGCAT 24843 28 100.0 33 ............................ CTAGTATAGTATGATGAGATGAAATTACCCTAT 24782 28 100.0 32 ............................ CGCGTGAGGGGCTTTTTTTAAAGGGCAACATT 24722 28 100.0 32 ............................ CGGCGCGGTGCCAGGGTCTCAAAACGAGAGAT 24662 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 9 28 100.0 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CTTCCCCAAACGCAGCCCGTATGCCGTTGCCTTGGAGCTTACCTGGAAGAAGTAAAATCCGGCCTTACAGAATCCATGTGTGATTTTCAGGTGGTGGAATTTGAGGATGAAGCGGAACAACCGCGACGAAAAGAGTGGCTGCTGGAAGATACCGAAACGAAATGCGACTACTGCCGGGCGTTAAATCATGTGCTGATGGTGGCGAATTTTGACGGCGATATGTTGCCGCACATCACGGGGCTGCTTCATGACATTACGCATTCTATGGCCGCAGACGTTGTTGCGCCTCGAAATGCAGAACCGGTAATTCACATTATTTCCTGAGTTCGGGCCCAGGCGTCGGGGGCATTTCTCTGACGCCGTTGGCGTGACCCTTTTTTTTGATGTATACGTAACGTATTGATTTGTTTGGTGCGGATTTACGTGCCAGAAAAAAGGGTTTTATGCGTATAAGTTGATTATTTTGTTTGCTAACAATAAGATGGCGTGGTTTCTTTCCA # Right flank : ACGCGCGGCACTCCGACGTTCACTGCCCCACACCATCCTTCTCAAACCAACCCACTTTAAAATATTCACCAACCCAATTTAATACCTCATCCTATCAAACCCGCACTCTCTATTTTTCATAAAAAATAAAAAACTCATTCACAAACAAATTATATTCTAACGAATATATTATTCGCAAAAATAATACTTCAGCTAAGAACCTGATTTTTCATCGTATTCTCATGGTGATTATTATTCATTTGATACCCGTCACATTTGTTTTTATCCGTTATTCGCTAACATACTTCGCATTCAACACCCTGAAATAAAAGCCCTTGCCATGCCCGTAAACAGCATCACTCCTACAGACTTAAAAACCATCCTGCATTCAAAGCGCGCCAATATTTATTACCTGGAGAAATGTCGTATTCAGGTGAATGGTGGACGTGTTGAATATGTGACTCAGGAAGGGAAAGAATCGTTTTACTGGAATATTCCCATCGCGAATACGACTGCGGTGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [43.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 3 40847-40399 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAATV010000030.1 Enterobacter asburiae strain 5832 Ea-5832_contig30, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 40846 28 100.0 32 ............................ AGAAGAGTGGTAGGCACTGCGCCTGATGCTGG 40786 28 96.4 32 .....G...................... ATCGACTCACGGCGGCCGCCCACGGCCAGCAC 40726 28 100.0 32 ............................ CGCCAATCGACGCCGCCCAGCGCAATTCTATT 40666 28 100.0 32 ............................ TTAACTACTCTATACCCAAATGGGAAGGTGTG 40606 28 100.0 32 ............................ GTGTACGCGTCGTACAAGTCGCCAAGAAAAGA 40546 28 100.0 32 ............................ AACGCAAATAAATGTCACCACACTGGATAATG 40486 28 96.4 32 ...........C................ TTGCCGGGTGATTTAGCTGTCTTGCCGTCGTT 40426 28 82.1 0 .....................AACC.C. | ========== ====== ====== ====== ============================ ================================ ================== 8 28 96.9 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : CGGTTTGCACAAGCTTTTTGGCGGCGTGGGCTTTATCAGCGGCATGCTGGTGGAAAAAGGATTGCCTGGATTTATCGCCTACGGCGTGTTGATTGGCGAAGTGCTGGCGCCAGTCCTGATTATTATCGGGCTCTTTACGCGCCCGGCCGCGCTGGTGCTGGCGTTTACGATGATTGTGGCGTGGCTGATGGTGGGAATGGGTGAAACGTTCGCCCTCGATAAGGTTGGTGCATGGGCGATTGAAAGCCTGGTGTACTTCTTTGTTGGCTCGCTGGCGGTGGCGTGTTTAGGGGCAGGGCGTTACGCGGTGGGGAAAGACCCAGCGTGGCGTTGAGGTTTGGGCTCGGGTATGAAGGAAGGGGTCTGAGGACCCTTTTTTATTGGCGATTTGTAACTCATTGATTTTATTGTGCTGAAATGTATGCAAAGAAAAAAGGGGTTGAGACGATTTTTTTAGGTAATTTCTTTATCTGACAAGGTGATAGGTGTAGATTGTTCCA # Right flank : TCTAGTTCGGTCAAACACTGTGCTGCCTGTTTATAAGCCCGGTGGCGCTAGCGCTTACCGGGCCTACGAAGAGCCTGCATGTAAAAAGTAGGCCGGGTAAACGCAGTGCCACCCGACAAAAAGCCTGAGTGGAAAAAGTAGGCCGGGTAAACGCAGTGCCACCCGGCAAAAAGCCTGAATGGATAAGGTAGGTCGGGTAAACGCAGTGCCATCCGACAAAAAGCCTGAATGGATAAGGTAGGCCGGGTAAACGCAGTGCCACCCGACAAAAAACGGCGGCACCGCGTCAGATTATGCGAGAACTAAATCCCCCTGCGGGTGGCACGAGCACGCCAGCACGTAGCCCTCGGCAACTTCCGCGTCGGAGAGCGTCATGGTGCTGGTGACGGTATACTCCCCAGAAACCACCTTCGTCTTACAGCAGCCGCACACGCCCGCGCGGCAGGCTGCCACGACAGGCACCCTGTTGCTTTCCAGCGCCTCCAGCAGCGTCGTCCCCA # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [45.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //