Array 1 103150-106361 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJEKX010000017.1 Acinetobacter baumannii strain MRSN408 MRSN408_contig00017, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 103150 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 103210 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 103270 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 103330 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 103390 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 103450 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 103510 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 103570 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 103630 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 103690 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 103750 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 103810 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 103870 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 103930 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 103990 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 104050 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 104110 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 104170 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 104230 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 104290 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 104350 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 104410 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 104470 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 104530 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 104590 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 104650 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 104710 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 104770 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 104830 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 104890 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 104950 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 105010 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 105070 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 105130 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 105190 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 105250 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 105310 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 105371 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 105431 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 105491 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 105551 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 105611 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 105671 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 105731 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 105791 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 105852 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 105912 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 105972 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 106032 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 106092 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 106152 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 106212 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 106272 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 106332 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 54 30 95.5 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.34 # Score Detail : 1:0, 2:3, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.30, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //