Array 1 2668366-2667823 **** Predicted by CRISPRDetect 2.4 *** >NZ_WUQX01000001.1 Sporofaciens musculi strain WCA-9-b2 tig00000001_pilon, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 2668365 36 100.0 30 .................................... CCTGCGAATCTCGTTCAAAAGAGCGTTCTT 2668299 36 100.0 30 .................................... TATTTGCGTATAAGAAAAGAGAGAGCGTAT 2668233 36 100.0 30 .................................... GTCCGTTTAGAGTTAAGGATTGTGTACTAA 2668167 36 100.0 30 .................................... AAATCTATGAGATATCAAGGGCAAACATAT 2668101 36 100.0 30 .................................... AAAGAAGCTAGATGGAATTGCCGCTGGTGC 2668035 36 94.4 30 ..............A.........A........... AGAGGCGAGAGCAACCGCCCCCGTCAAGTG 2667969 36 94.4 30 ..............A.........A........... GTATCCCCCTCATGGCAAAGATAACGGTAT 2667903 36 94.4 9 ..............A.........A........... CGTCATACC Deletion [2667859] 2667858 36 86.1 0 ..............A....A.A..........G..G | ========== ====== ====== ====== ==================================== ============================== ================== 9 36 96.6 28 GTTTGAGAGTAGTGTAATTTCGTATGGTAGTGAAAC # Left flank : CAATATCAATCCCAACAAACAGTGTTGAGAGGTAATCAATATGTTCTTTCACGGATCATCACCACCTTTCAATAAAAGTGAAGAAGAGTAATCATGGGTTATCCCAGACCACTACGCCGGCCTAAACCTCGCGTTATGAGCATTACCTGGAAGAAATACCCTGCTGGTGGCTAGATACCAGGATGCAGCATTTGTGTAATAAGTCTTAGCGCAGTATTAGGGTTGCATGCTTTCTTGGCAATAGCAAACGCTTTGCAGGAGCGATGAAGCAATGACCATAGCTACAATTCTTATGGAACTTATTGTAACATCTGGGACCATGACTATAAAGTAACTTATTAACCAATAGACAGAGAATGGATGAACCAGCGTGATTGAAGAAGAATCTTCGGAAAGGATGTTTAGAATTATCCTTCTGTCTAATCAAAAAGAATAAGTCTGTAAGCAGTTTTTCTTGCTTACAAACTTATTATACGAGGAGCAATTATTATGAAAGAATG # Right flank : GTGGATGACATACATTGGATCTATGTCAATACTTTAGACAAAAAAAGTTGAAAGATTATGCTGCTTTTTTGAGTTCCTCATCCTCCTTTTGCTGTGGTGTCAGATAACCGATAGAGCTATGGATCCGTTTACGGTTATACCAGCCCTCTATGTATTTAAAGATTGCTCTGCGAGCTTCCCTTAAATCCTGGTAAGTATGAAGATAGATTTCTTCCTTTTTCAGTACGGAATGGAAAGATTCCATACAGGCATTATCGTATGGATTTCCCTTACGACTAAATGAATGCAGGATTCCTTTACTGCCCAGGCAGTCTTCAAATGCCTGGCTCGTATACTGACTTCCAAGATCACTATGAAGGATGATCCCCTCGGTATCCCTGACATTCAGGCATGCGTTTTCTACCGCTTTAACCGCCAGTTCCGCCGTCATAGATGTGCCATAGGCATACCCTATAATCTTTCGGCTGCACAGATCCATGACAGAAGCCAGATAGGTCCAT # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:-0.26, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAGTAGTGTAATTTCGTATGGTAGTGAAAC # Alternate repeat : GTTTGAGAGTAGTGAAATTTCGTAAGGTAGTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 2670209-2671563 **** Predicted by CRISPRDetect 2.4 *** >NZ_WUQX01000001.1 Sporofaciens musculi strain WCA-9-b2 tig00000001_pilon, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 2670209 36 100.0 29 .................................... CTTGCGCTGGTTGTCCTACATATTGCATG 2670274 36 100.0 30 .................................... GAATGGTTGCAGGGGGCTGACGGGATGTCG 2670340 36 100.0 30 .................................... AACGTCGGCGGCCTTGTGCAGCTCCCCCTT 2670406 36 100.0 30 .................................... CATAGACGACCTTCATTATCAATATCGCAT 2670472 36 100.0 30 .................................... CTTTTCATCTACCTTTGCTTTGATTGCCCT 2670538 36 100.0 30 .................................... CTTTTCATCTACCTTTGCTTTGATTGCCCT 2670604 36 100.0 30 .................................... CATTCTCTTCTATTACCGGTAAATTTGCAA 2670670 36 100.0 30 .................................... GATTAGGAGGCGAGCCGAATAATGGACGTT 2670736 36 100.0 30 .................................... TCGAAAGACCAATCATCAAACTGCCCTCTA 2670802 36 100.0 30 .................................... TCATCGAAACCCTAATGCAGCACTGTGGAG 2670868 36 100.0 30 .................................... TATGTCTAGCGAGTTATTAGTAGATCCTGG 2670934 36 100.0 30 .................................... AATGGTGTAACCATTCATAATAGATGATGC 2671000 36 100.0 30 .................................... CTGAACAGCTTCCAACTAAAAACAATGTCC 2671066 36 100.0 30 .................................... TGAAAGATATTGTGATGATATAGGAGGTAA 2671132 36 100.0 30 .................................... ACGTTCTCCAACTCTCATTGTTTATATATC 2671198 36 100.0 30 .................................... TAAAAGAATTGCAGGAATGATTCTCCAAGA 2671264 36 100.0 30 .................................... CCACTTTCATACTCAAAGACAGGCCAACAA 2671330 36 100.0 30 .................................... TAAAAGAATTGCAGGAATGATTCTCCAAGA 2671396 36 100.0 30 .................................... CCACTTTCATACTCAAAGACAGGCCAACAA 2671462 36 100.0 30 .................................... AATATCCCTGACGGATGGTGAAGGAAATAT 2671528 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 21 36 100.0 30 GTTTCACTACCATACGAAATTACACTACTCTCAAAC # Left flank : TACTGAATTCCATTCCTGGGATTGGTAAAGTTTATTCAGCCGGTATCTTGGCCGAAATGGGTTCCATTAAGGCTTTTCCTAATGCCAATGCCCTCGCAAAATACTGTGGTATCGTTTGGAACGATAATGACTCTGGCGATTTCGTAGCCGAAGACAAACACATGAGCAAAGCTGGCAACAGATATCTGCGCTACTACATCATAGAAGCTGCCGGAAGTGTTATAAGACACTGTCCTGAATACAAAGCTTTCTATGACAAAAATATGCTGAGACAAGAAACCATCAGCATAAACGAGCACTCGCGTTGACTTCCCGTAAATTTATACGTCTGCTCTTTGGTCTGCTGGACAAGGGCCAACTCTACTCTCCGGAAAAGAGTAGGTAATCCATACTGCATATCGAACTTACGTTCTTAATAGACCGTAGGTCTATTAAGGTTACCCTTTTCCAAGAAAATCTTTTTCATTTTCCTCTTGACATATTACCAAATTGCTTTCTTT # Right flank : CCTCAAACCTCAAAACAAAAAAATTGTCGGGCGAGTAGAAAATGCCACTACAACATCGTAACTTCGTATTATCTTATATCATTACACATCCAAATGAATTTCACAAGAGTCTTTATCAATAATTATAGTTTCAGAATACTTTTTTACCATATCCGGCTGTCTATTCTCCACCAAAAGTACGCAAATCTTTTGATAATGCACATATTCATAAAATTTTTCAACCTCATACTCTGTCAAATAAGAAAGTAAATGTACAAACACAAAACATTTAACATCCAGCAATTCACATGACACTTTCATATAGTCTAAAATTTTCTCAACCAATGACTCATGCATATCATCAAACCGAATTTCAGCAAGCTTTAACAAACTCTGGATATCCATTTTATCAGAATATACTAATCCCCACTCCATACCCTGAACAATATTAATCACATAACTCTCCAAATCAGATATAATCCTATTTCCCTCAACCAATAATTCCGTTGACAATATCTCCT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCACTACCATACGAAATTACACTACTCTCAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA //