Array 1 144732-142567 **** Predicted by CRISPRDetect 2.4 *** >NZ_CACSKO010000010.1 Raoultella terrigena isolate 18094_SP04_E5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 144731 29 100.0 32 ............................. CCATTGATAGAATATATCGAGAAATACTACGG 144670 29 100.0 32 ............................. GCGCGATTGCTTCGGTTAAGGACAGTAACCTG 144609 29 100.0 32 ............................. CTATTTACCTGAGTAGTAATAATTGCTGTCAA 144548 29 100.0 32 ............................. CCCGCGTTATGGTTTTAGTGATCGCTTCGGAT 144487 29 100.0 32 ............................. ACAATTGGTCTTCACAAAACTGCTGCTGGTGT 144426 29 100.0 32 ............................. CATCAGCAATCTGGTCTGCCGCGATGACGGCA 144365 29 100.0 32 ............................. CATCCAGCTGTCGTCCTCCCAGACCTGCTGCA 144304 29 100.0 32 ............................. TGCCTGCCCTTCATGGTGTGAATGCTGTCGAT 144243 29 100.0 32 ............................. TACGAACGTGCCGCCGAATTCGACGGCTGTCT 144182 29 100.0 32 ............................. CGATGCCGTCCGGCAGAGTGTAGGTCGCAGGT 144121 29 100.0 32 ............................. CCAGGTATTCTTCTCGGGTTTGTGATTGAGCA 144060 29 100.0 32 ............................. CCTGTGAACTATAAACGGACTGGCCACGCTAT 143999 29 100.0 32 ............................. CGCCGGAACCGCTGACTCAGTGCAACGGGTAA 143938 29 100.0 32 ............................. GCGTCTGGTCCCCGATTGTTGAGGGTCGGATT 143877 29 100.0 32 ............................. GCGCTATTGATCGGTAGTAGATCCTGATGTCG 143816 29 100.0 32 ............................. GAAAACCATAATGAATAACAGCCTGATCGCCA 143755 29 100.0 32 ............................. CAGTACGAAAAGGCTAGAACTGATGCGCAGTG 143694 29 100.0 32 ............................. AATTTTGAGACGATAGCATTTTGACGCTTGGC 143633 29 100.0 32 ............................. CGGCCAACGTGGTCGAAGTTACCCGCAAGATT 143572 29 100.0 32 ............................. TAGTCCTGTGGCGTGCCTTTGCCCGCCGAGGT 143511 29 100.0 32 ............................. TAAAAACTCTAATTTCTCAGTCTGGTGGTGAT 143450 29 100.0 32 ............................. CACATGCTGTACGCCGGCATACCGCTGAAAGT 143389 29 100.0 32 ............................. TTTTCTCTTTTCGGCCGTAAAAATGAAGTGAA 143328 29 100.0 32 ............................. GGATACGTGTTCCTCTTTTTATGGAGAATGCG 143267 29 100.0 32 ............................. CCACTAACGGGTTAACGCTGCGGCTGGATTCA 143206 29 100.0 32 ............................. TGCTCCCGGTTTTACCTGACAGCTGGAAAATG 143145 29 100.0 32 ............................. AGTGCCGCACCGTCAACGAGTGGGATAGCCAG 143084 29 100.0 32 ............................. CCCGGTTAATGACATACGACGCAATAATCGTG 143023 29 96.6 32 .............T............... CATTTTGCAGTCCGGGGAACTCTTCGATGTTA 142962 29 96.6 32 ........T.................... AGATGGAAGAAGTGGGGCCAAAGGTGCCGCTC 142901 29 100.0 32 ............................. CGTCCATAGGTCAGGGAGGTGTGCAGGTAGCG 142840 29 96.6 32 ...........A................. GTCGATCCAGTCGCTCGCGTCAGCGCTGCCAG 142779 29 100.0 32 ............................. GGGGTAATGTGTCTTCAGCATGAATATGGAGA 142718 29 100.0 32 ............................. CATCCAGTGCGATCTGCTCTTTTGCATGCTGG 142657 29 100.0 32 ............................. GTAAATCTGGTATTCACTGTCGTTATCACCAC 142596 29 100.0 0 ............................. | G [142575] ========== ====== ====== ====== ============================= ================================ ================== 36 29 99.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGTTGGCAGCAGGTGAAATACTCCCACCGCAACCAACCCCCGATATGCTGCCTCCGGCAATTCCTGAACCGAAACCTATTGGTGATTGCGGTCATAGAGGGGGTAGTGGATGAGTATGGTTGTCGTTGTGACGGAAAATGTCCCACCGCGATTACGAGGTCGACTTGCGATCTGGCTTCTGGAAATACGGGCTGGTGTTTACGTTGGTGATACTTCAAAACGTATCCGTGAAATGATCTGGCAACAAGTTACTCAACTTGGAGGCAGTGGGAATGTTGTAATGGCCTGGGCAACGAATACCGAATCTGGTTTTGAGTTTCAAACATGGGGAGAAAACCGCCGTATGCCGGTAGATCTAGACGGGCTTCGGTTGGTTTCATTTTTTCCTTTTGAAAATCAATAGAATAACGGTTCTTTAATAATGCGAAATTGTTACAATCAAGTTGGTAGAGTGTTGGTTAATGGAAAGGTTATTGAAAAATAACAATATATTTTTAGT # Right flank : GCTGATATCACCGAACTGGCGCAGAGCCTGAATCGTTCCCCGCAGCAGCAAAGCGCCAGCTAGCCGCGCTTATCGGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACCTTGACGACGTCGCGGCTGCGCCGCTCGATGCGGCCGGGGAGCGCTTTGTCGATATGCTGCTGATTATCCAGCTGCACGCTGTGCCAGCTGGAGCCGTCAGGGAAGGCGGGGGATTTTGCCCGCTGCTGGAAACCATCTTTCTTACCGAGCGACCAGTTGGTGGCCTCCACCGACAGCACCGGGATCCCGGCGCTATCAAAAACGCTGGCGTCGTTACAGCAGCCGGTGCCCTGCGGATAGTCGCGGTTCAGCCCCGGGTTGCTGAAGGCGGCAACGCCTTTGCTACGCGCGATGGCCAGCGCCCGGTCGCGGGTCAGCTTGCGAATCGCCGCCGGCGTGCTGCGGCCGCTATTAAAATAGAGCTTGTCGCCGACCACCAGATTATCGAG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [38.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //