Array 1 1941-5332 **** Predicted by CRISPRDetect 2.4 *** >NZ_FCND01000089.1 Acinetobacter baumannii strain D, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 1941 30 93.3 30 ............................GG AGAAATATTTTTTTTGAAAAATTATAAAAA 2001 30 93.3 30 ............................AC TCCTGAGCAATTAATACGCAAGAGAATATT 2061 30 96.7 30 .............................C TTGAGTGTAGCTCATTGCTTACTGCTAAAA 2121 30 96.7 30 .............................G CTTCATCATCATTTAGAGATAAATATATAA 2181 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 2241 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 2301 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 2361 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 2421 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 2481 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 2541 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 2601 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 2661 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 2721 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 2781 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 2841 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 2901 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 2961 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 3021 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 3081 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 3141 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 3201 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 3261 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 3321 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 3381 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 3441 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 3501 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 3561 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 3621 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 3681 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 3741 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 3801 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 3861 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 3921 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 3981 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 4041 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 4101 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 4161 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 4221 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 4281 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 4342 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 4402 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 4462 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 4522 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 4582 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 4642 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 4702 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 4762 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 4823 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 4883 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 4943 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 5003 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 5063 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 5123 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 5183 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 5243 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 5303 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 57 30 95.4 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.28, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //