Array 1 1748648-1750002 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017151.1 Limosilactobacillus fermentum strain NCC2970 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1748648 36 100.0 30 .................................... GTAAAGGAGGTGGAATATAATGAAATTATC 1748714 36 100.0 30 .................................... TTACTTTGAGGTTACTTACTTTGGCGAAGA 1748780 36 100.0 30 .................................... GGAACTCGCCCGTGCTAGGATCGGATCCAT 1748846 36 100.0 30 .................................... TAACAAACAGTGAATAGCAAAGACGGGTAG 1748912 36 100.0 30 .................................... TGATATGCTAGTTATGGAGAATTAAAATCC 1748978 36 100.0 30 .................................... AGACCGTGTTTGGTAAGTCATCGAGTTGTT 1749044 36 100.0 30 .................................... ACGCTGATAAGCACACGTCTGCAGAAGACG 1749110 36 100.0 30 .................................... AAGCTTGTATCTATGACTATCTAGCCAATC 1749176 36 100.0 30 .................................... AGCCGTTGTTAAGGCCAGCCAATAAATCGC 1749242 36 100.0 30 .................................... GTCTGATATGGCGGGCTGACCGTTGCCCCC 1749308 36 100.0 30 .................................... TGAGAGCAACGACCATTACATAAAAGGTTG 1749374 36 100.0 30 .................................... TGAGAGCAACGACCATTACATAAAAGGTTG 1749440 36 100.0 30 .................................... CGAACCCGAAGTGACTGGTACCGACCCGAA 1749506 36 100.0 30 .................................... TAGTCGCCCTGTTTTAAAGGGGGTTCACTA 1749572 36 100.0 30 .................................... CGACTGATCGAAAACAAACATTAGATTATA 1749638 36 100.0 29 .................................... CACGATCCCGAAGACGACGTAATCAATAC 1749703 36 100.0 30 .................................... CCGTTGCGATGATTAAGACAACAAGTGCAG 1749769 36 100.0 30 .................................... GACGATTGATCTAGCACATGCAAGCTATCA 1749835 36 100.0 31 .................................... CCATGAAAATGGGCCGACTGGTTATGCTGCT 1749902 36 100.0 30 .................................... TATGTACAACGGTAAGCCAATCAATAATCA 1749968 35 86.1 0 ..........................-..TT..A.T | ========== ====== ====== ====== ==================================== =============================== ================== 21 36 99.3 30 GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC # Left flank : TAATCCAACCAAACTTGATAGTTACCAAACGTCACTCGATAAGATGATTGTCAAAAATCTTAGTATCGAGAAGCAAGATAGGATGAATGACCTTGCTCGTGAGATTTACTCAGAAATGCAAGATTCCCTGTTCGAATTCGATTTGCCATTGGAGGTCAGATATGACGAAAGTCTTTTGAGATTATACAAATATGCGAAAATCAAGTATTTGACGCAAGTAATAAGGCAACCTTATGGTATAATTGAAACCGATCTAAAATTACATCTCGAATTAAAGGACTGTCAGGTTCTTGGGTATTGTAATGTCGCTAATTACTTATTACCTGAGCAGATACAGGAATTCGCTACTCTTGTTGAGAAAACCGAATTGGCAGTTTTATTAGTAGAATTCTCAGAAAAGAGAGAAACTCTACAACAACTCAAACAGGATATTTACCGGATTGATCGGGACTTCGTGGACTGGCACGAATAGACCGTTAGTTTTTAATGAGAAAACAACG # Right flank : TTATAGACTAAGGGCATTGCTGTTTTTAGCAATGCCTTTTTTAGAAGTGATGAGGGAAAGGTAAATGTTTTCACGTTGGTAATCTGACGGGAACTTTAGTGGGCGATGTGCTAGGATAGGGCCAAAATGATTGGAAGTGTTTGCCATGCAAATTGATCCCGAACGGATTCGCCCCGAACTGCGCCGAATCGGCAAGGTGGGGTACGCAATCAACCTGATGGCCAGCCCGCACGCCTGCAACGAATGGGACGAATAACGGCGAAGGCGAAAATGCCCATTAACTCGCGGCGGGTGATCAAACAAGACGTTTGGATTGAACGCCCTGACCATAGCAATCTTCGGCTGGCTATTTTCCGGGCCAAGCAAGTTGCTACCAAGCACCCGGCCACCGGGATCCTCTGGTTGCACGGGGGAGGCTACGCCTTGGAAACCGCCGAAAATGCCTTGGTTTATGCTGAACAGTTGGTGGCTGACGGACGGTCCGTGATGGTGGCGCCGGA # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTGGATGAGTGTCAGATCAGTAGTTCCGAGCAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.60,-1.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //