Array 1 226-1 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_QOSV01000017.1 Listeria monocytogenes strain NRRL B-33427 AF876_17, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                               	Insertion/Deletion
==========	======	======	======	=============================	==============================================	==================
       225	    29	  62.1	    46	A....T....A..T...A..GG.CG.C.A	AAATAGTGACCTGAGTTATGATGGGAGTAGGCGTAAAATAGAGCGG	G [217]
       149	    29	 100.0	    36	.............................	GGGGCAGTTAATGCTTGGAATTGCTCAATAGTTAGC          	
        84	    29	 100.0	    35	.............................	AAAATTTAGAGTTGATATTTACAAATGATGTAAAC           	
        20	    20	  69.0	     0	....................---------	|                                             	
==========	======	======	======	=============================	==============================================	==================
         4	    29	  82.8	    39	GTTTTAACTACTTATTATGAAATGTAAAT	                                              	       

# Left flank :   GTATCTTATCGTCATTTAATTCGCTTAGAATGTTATAAATTAGTAAAGCATTTGATGAATGATAAAGAATACGAAGCATTTAAAATTTGGTGGTGAAGATATGTATGTAATTTTAATTTATGATATTTCAATCGAAAATGGTGGAGCAAAAGTCTGGAGAAATGTATTTAAGATTTGTAAAAAGTACTTAACTCATGTTCAAAAATCAGTTTTTGAAGGTGAAATAACTCCAGCGCTTTTAGTTAAGTTAAGGATGGAGTTAGATAAGTATATTCGAGATGATCAAGATTCAGTAATTGTTTTTTCTAGTAGACAACAAAGATGGCTAGAAAAAGAATTTTGGGGATTAACGGATGAAAAGACTTCTAATTTCTTTTGATGTTCTCGGTCTGTCGACCTTTAGTAGTGCGAAAAATAGTGGGGTTCGACAGATTTAGGGAAATCATTGGGGGAGAAAGAGTTTGAAGTTTTTAAGCGAAAATCTGAAGGGATAAGTTATG
# Right flank :  A

# Questionable array : NO	 Score: 5.00
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.14, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAACTACTTATTATGAAATGTAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:84.21%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAACTACTTATTATGAAATGTAAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-5] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.41,4.5   Confidence: HIGH] 

# Array family : II-A [Matched known repeat from this family],   
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