Array 1 5585092-5585883 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB911581.1 Streptomyces bottropensis ATCC 25435 StrboDRAFT_scaffold1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ============================================================================================================================================================================================= ================== 5585092 28 71.4 33 A........GT..A..C.......GTT. CTCAAGAACCACCGGGACCACTCGGAATCCTCC 5585153 28 82.1 33 .........GT..A..C........T.. CAGCTCCTCACAGCTGCCGAGGGAGTAGTCGCC 5585213 28 82.1 31 ........TTA...TC............ GTTCGCCAACCGGGCACAGCTGTCCGTCGTC C [5585232] 5585273 28 71.4 189 .CA............A...A.A..GTT. CCTCTCATGCACCCAGGTAGCCCAGCTGGAGGTCTTCCCATATGTATGAGGGTCCATCGCGCAGCAGGTAGCGTGCCAGTGATTGAGGATTGCGCTCCCCACGCGTGCGCGGGGGGGTCCTTTCGGGCTGGATCCGCCTGACTACCCAAAACAGCCCTCTCCGTTCTTCAGAGCCCCAGGTCACGAAGA 5585490 28 100.0 33 ............................ CGAAGCAGGCCGAGCTGCGCTGGAGCGCTTCGC 5585551 28 100.0 33 ............................ CACTGGCCGATGCACGCCGACCGCGGCGCCTTC C [5585562] 5585613 28 82.1 33 A...G..G.................TT. CTCTTCCTGTGCGTCACCGCGTTGGTCGCGAGT 5585674 28 89.3 32 ...........C.............TT. CGCCCAGCCTACGCGGCACCATTCGCCCGCGA 5585734 28 82.1 33 .G.......G.G.C............T. CGCCGTGAACCCACCAGACCTCGCTCTGTGTTG 5585795 28 75.0 33 .......T.G.G.C..C........CT. CACGGTGACGCCTCCCCGGTCGTCCAGCCGCGC 5585856 28 71.4 0 C.T...G....G.......C....AAG. | ========== ====== ====== ====== ============================ ============================================================================================================================================================================================= ================== 11 28 82.4 48 GTCTTCCCCACACGCGTGGGGGTCTGCC # Left flank : AACGACCGCGTCTGCAGGCATCGTCCCTGGACGCACTCCCGCGGGAGGCCGTTGCCACAGGCCCGGCAGCTGCGGGTGCATAAGGAGGAGCTCGGGCTCTGCTTCATGGCCGGCCAGAGGTCCGGGCGTCCCGCCATCCTGAGTTCAGGCCCCGCCAGGCCCCCCGTCTTGCCGGGATCCCCTTCACTACCGCTGCCGTCCCCGCGGCACCCTTGAGCGTGGCCGCAGGACTCGTATCCGTCTGGCTCCAGCCCGCACTTTCCGTTCAACGACTGCTGTCGGCTGCAGTCCCATAGGTCAGCCCGCGCCTAACGGATGAAACCCCGCAGGCAAGCACAACCGGCACGCTACCGATGATCCCAACACCCCTTGCCAGTAAGTCAGTTCAGGTCGAACGGCGACGGCAGCGCTCGCCGGCAGCGACTCTGATCAGCACGGCCAGCTCATGTAAAGTGAGCAAAAGACAGTCGGCTTGTCTCCGAAACCGCAGGTGGACAAAA # Right flank : CAATGAGGCGGGTATCTCAGCCCCTCACTCATGTCGAGCAGAGTCTCAGGATCGCCCCCAGCTCTCGCCCTGCAAGAACAAAAAGCAGCAGGTCAGATGACCAGTCTCTATGGCCTTCTCGTTTCAGTGCGCTGGAGATTCTCACGCAATGTCACTAAAGCCTTCTCACTCGCTGTCACCACTTCTCCGTCTTGAACAGCAAAGATGCATGACACCCAGATGACAACTACCGGTGACACCGAAATGAAAAGTCGCAGTGAAGGTGTCCGCCGGGTGGGCCGATCACCAGGCGATGGTCAGCGTGCGCAGTGCCGAGAGCCGCACGAGCGCCGAGTCTGCGATGAGCCTCCAGCCCCGTCCCTCGACCTGGGGCGTATGCGGATATGTGGGCGGCACGGACGCGTTCGCCGTCGTCCGACTCGCGCGGCGGATTCCCCGGATCGACTGACCCAGAGCTTCCCGCCCCTGCCTGGGCGGGCAGGCGGGACCCGCCGGTCCAT # Questionable array : NO Score: 3.13 # Score Detail : 1:0, 2:3, 3:0, 4:0.12, 5:0, 6:0.25, 7:-1.56, 8:1, 9:0.32, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTCCCCACACGCGTGGGGGTCTGCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCTTCCCCACACCCGTGGGGGTGTTTC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-7.30,-7.30] Score: 0/0.37 # Array degeneracy analysis prediction: R [21-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.78 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 5668252-5666455 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB911581.1 Streptomyces bottropensis ATCC 25435 StrboDRAFT_scaffold1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 5668251 29 100.0 32 ............................. GTGATGTCGCCGTAGTGGGTACCTCCGGTGAC 5668190 29 100.0 32 ............................. CCCTGCACCGTGAACTCGCCGAGCTGGGCGAA 5668129 29 100.0 32 ............................. GCCAGCGCCGGGTAGGCGCCGGGCACGCTGAC 5668068 29 100.0 32 ............................. GCGGAACGCGGCGAGCTTGTCCTGCGCCTTGG 5668007 29 100.0 32 ............................. GGGCTGCAGGGGCCGGTAAGGTGACGCTCACC 5667946 29 100.0 32 ............................. TGGGGGGCGCCGACTCCGCGGCGGCCGCCGAC 5667885 29 100.0 32 ............................. AAGTTCGGGCACTACGTGAAGGCACGGTGGGG 5667824 29 100.0 32 ............................. CGCCGCCAGGTCGCCGCCATGGACGACGTGAC 5667763 29 96.6 32 ............................C CACCCCAGGTGCCGCGTACGTCGCCACCCTCG 5667702 29 96.6 32 ............................T TCGCTTTGACACCAACGTCGGTCCGGTTGTTC 5667641 29 100.0 32 ............................. ACTCGTCGGCACTGACCACCCGCAGAGCAGCG 5667580 29 100.0 32 ............................. ATCTCACTGGTCGCGGTGACGGCCGTGTTGCT 5667519 29 100.0 32 ............................. TCCATCCCCACCGAGAGTCTTGATCAGTTCGA 5667458 29 100.0 32 ............................. CCGCGATCCGGCGCTCGGACGAGGCCACGCTT 5667397 29 100.0 32 ............................. AACTCCTACGGGGCGGTGCGGTCGGGCGGGTG 5667336 29 100.0 32 ............................. AACTCCTACGGGGCGGTGCGGTCGGGCGGGTG 5667275 29 100.0 32 ............................. GATCCTTCGGCGCTGCTGGATTACAGCTGGGA 5667214 29 100.0 32 ............................. CCGCTCGCCCTCATGCGGTGGCTCGTACGGCT 5667153 29 100.0 32 ............................. ATCCGGGGGCGGGTCGGTCCTCTTGTTCTCCA 5667092 29 96.6 32 ...T......................... AACGGGTTGCGCTACGCGCCCGGCGAGACCTC 5667031 29 100.0 32 ............................. GCCGACAGCATCCGGGCCCTGCTCGGTGCCCG 5666970 29 100.0 32 ............................. TTCGTCACCGACATCGCCACCCTGGTCGGCAA 5666909 29 96.6 32 .......................A..... ACGGCCGCGCTGCTGTGCCGCGCCCACCAGTG 5666848 29 100.0 32 ............................. ATCACGTCACCACCGTCGTTCACCGACGCCGC 5666787 29 96.6 32 .........................T... AACGTCCCGGATTCGGCGGCCTGCCACTGGGT 5666726 29 89.7 32 G........................T..A TCAGACTACGAAGGCCGAGGAGTTCGTGAGGC 5666665 29 89.7 32 G.......................GT... CGGAATCGGAGCGCCGCGCCGGGGAGGAAGCC 5666604 29 89.7 32 G.........A..............T... ATGCTCACCGTCGCGCTGCTGGGCCCGTCGCT 5666543 29 93.1 31 G........................T... CTGCAGGTCGCCGAGTGCGCTCCTCGCACCC 5666483 29 86.2 0 G......T.................T.T. | ========== ====== ====== ====== ============================= ================================ ================== 30 29 97.7 32 CTGCTCTCCGCGCGAGCGGAGGTGAACCG # Left flank : TCGCTCCGAACCGCCGCGAACGCCTCCGGAACCTGAGCCTGGAACGGAGGAGTGATCTTCCCCAGATCATGCAGCCCCGCCCAGAACGCCAGCACCTGCCGGGTCTCGGCCATCGTCAGCCCCAGCGCCTGCGTAACCTTCTCGCGCACCTGATCACTCAGCAGCGCATCCCACAGTGCGCCGAACACCGCTGCGGCGTCGAGCAGATGGCAGACCACTGGGTACGGACGCGGAAGGCCATGTTCCTTGCCCCACAACCGGATGTCGATCGGGGGATCCCCGGGAGGGGCGGACTCACGCTTCATCATGACGGCAACGGATAGCAGGCCCCACTGACAATGCGCCCTCACCTGCGCGAAGACCAGACCACAACCGGCACGGGACCGTAAACTCCACACCATGGGGCCACAGTTGACGCGATATCTCGCCGATTCGGAGCGAACCGATCCACACACCGCAAAGAACTTGCAAAGTGCCTCAAGAAGCCCAGGTCAGCAAGC # Right flank : CCGGTGGGGGAGCGGACCGTCCCCATCTACCCGTGCTCTCCGCGCGAGGAGCAGATCGGAGCAGGAAGACGCCGTGGAGTCCGGCCACTAGAGCTGGGTTGATGCGGTGGATCCTGGCTTGCTCGTCCCGCTGGAGCAGTCGGCCCGCGCCGGCTGGGCCGACGTGGCGCTGCACCGCATGGAAGCGGGTTATGGTCCCGCCGATCTGTTGTTGCGGGATGGGGCTGGAGGGGTGCGTGGCGAAGTACTGCTGCACCGCGTCGTAGTGCAGGGTCGATGCCGGGATCCCGGTGGGGTGCGGCACATCGGTGATGTCGACTTCTGCCATTTTGCTTGACCTCAAGTCGGCGTGAAGTAGAACGCCTGTCATCCCGGCATGGCGAATGCAACCAGAAGGAGAGAATGCGATGGATTCTGCCCGTGGGGCCGATGACGAGCAGGCAGCCCGTTGGAATGGCCCCGTCGGTCAGGCGTGGGGCGAGCTGAAGGGAGTACTGGAG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCTCCGCGCGAGCGGAGGTGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCTCCGCGCGAGCGGAGGTGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.10,-11.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [17-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 5677999-5679257 **** Predicted by CRISPRDetect 2.4 *** >NZ_KB911581.1 Streptomyces bottropensis ATCC 25435 StrboDRAFT_scaffold1.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================= ================== 5677999 29 100.0 32 ............................. CCCGCCAGCAGTGGACCTGAGCCAGGGGAACA 5678060 29 100.0 32 ............................. CCCCTCGTCTACGACGAGAACGTCGCCATGCA 5678121 29 100.0 32 ............................. CGGTTCGGACAGGTTCTCTACGAGAAGCTGGG 5678182 29 100.0 32 ............................. CTGACCGCCGGGCCGAGTACGAGAGCGAGATG 5678243 29 100.0 32 ............................. CTCGCCCACCGCACCATCGGCGCTGTCATCGC 5678304 29 100.0 32 ............................. TCCTTGCGGCCCTTGGTGTTCTCGTCGACCCG 5678365 29 100.0 32 ............................. CTGTGTTCTTCCTCGGTGAGCCGCCGTGGCAT 5678426 29 100.0 32 ............................. CAGGCGCCATGCGGTGCCCACGATCAGCACGG 5678487 29 100.0 32 ............................. AACTCGCCACCAAGCACAACCTGATCGGCCGC 5678548 29 100.0 32 ............................. CGGCCGGCGGGAGCCTGAAGGAGAAGATCCTT 5678609 29 100.0 32 ............................. CTCAAGCGGCTGATGACGGTCGGTCCGGCCAT 5678670 29 100.0 32 ............................. TCGTTGCACGAGAACTCGGGCTTGCGGAGGCC 5678731 29 100.0 32 ............................. GCGTTCGCGTCGGCCATCCGGTCGCAGGGCAC 5678792 29 100.0 34 ............................. TTGAAGCGGGCCGGTGACGGGGGCCCACGGCCGC 5678855 29 96.6 32 .......................A..... TACCTCCGGTTCCAGATCGGCGGCCGGGTGAT T [5678879] 5678917 29 100.0 32 ............................. TGGCAGCAGTGGCTCAAGGAGATGGGACGCCT 5678978 29 100.0 32 ............................. CCATGACTTCCCCTTGGTCGCGTGCTCGTACT 5679039 29 100.0 39 ............................. GCGCGAGGAGACAGCATCCGGCGCAGTCGCGAGGCAGTC 5679107 29 100.0 32 ............................. CCCCAAGTGGGGCACCACGACCCTCCTCATCG 5679168 29 100.0 32 ............................. CGGATCGCGCCGGCGGACTCGGAGCGGATACC 5679229 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ======================================= ================== 21 29 99.8 32 GTGCTCTCCGCGCGAGCGGAGGTGATCCG # Left flank : CACCGACATCCAGGACCTCCTCGATCCCGGATCCAGCCGGGACGTCCCCGATCCCGAGGAGCAACTCGTCGACCTGTGGGACCCGGTCACCGGCCCCGTGCCCGGCGGCGCCAACCACGCCGCCGACACCTGACCACCCATACTCGTGCGAAGAGGAAGAGCACACCGCCATGGCCTCCATGATCGCCATCTCCGCCACCGCGGTCCCAGACCACCTCCGCGGCGCCCTCACCCGCTGGCTCCTCGAAGTAACACCCGAGCTGTACGTAGGCACTGTCTCGGCCCGCGTACGCGACGAACTCTGGACTTCCGTGACCGCATGCACAGGTGACGGAGTGTCCGTCCTGGTTTACCCCAGTGACAACGAGCAAGGCTTCGAACTCCGCACCGCAGGAACCCACCGACGCCACCCACTCGACTTCGATGGCATGACCCTGGTCGCATTCCTGGCGGAAGGTAAAGAAACCGCAAAGCCACTCTAGCGGTGCAGGTCAGTAAAG # Right flank : GCCGAGTGGGTCCGTCTCGCAAGGACGAAGGGCGTGCTCTCCGCGCTGGCTCGGCGGGGCCCAGGCCGGTCGGTGATCCTGGTGCGCCGATTCGGCGAGCGCGTCACGGCTGACCGGCGCCAGGTATGTTGGGGTGCCAGTAGGAATGCTGTCACCAGCCGCAGGTCGGGCGGATTTCGCCACCGGCGCTGGGAACGGACACCCGTATCGGGTTGTTCGCCCTCACCGCCGGGCCCTGTTGTGGAACGCTGATCACCCACCACCTGCGACTCAGGGGCGTGTCCTGTAGCCGCCTCAACCGCAATCGGTGCCCGTGCCGTCGGGACGCTGCGGAGTGGCCCGAGTTCGACGACATGCCAGCCCCTGTGGCCGCCTGCTGGTCGCACCTCACCGACTCTGAACGTGAGCAGTGCACGGCCGCTCGGAGCCGCCGGAACAAGGAACACCTCGATAGGTGCACCTGGTTGGAGCAGACGATCGCGGCGGCCCGCGGCGGCGCC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCTCCGCGCGAGCGGAGGTGATCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCTCCGCGCGAGCGGAGGTGATCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.70,-10.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //