Array 1 5547064-5544446 **** Predicted by CRISPRDetect 2.4 *** >NZ_AFXI01000001.1 Pseudomonas aeruginosa 9BR 9BRScaffold1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 5547063 30 100.0 39 .............................. ACTTTATTGCCAGGGCGAGACGACAGCGAGCGGGCTGGT 5546994 30 100.0 37 .............................. ACCGTCGAGTTGCGTGATGGCAACAGCGTGACGGGGT 5546927 30 100.0 36 .............................. TCTTCGCATCTGGCGATCCGCGCGGCGAACCGAAGT 5546861 30 100.0 37 .............................. TGGTCTGGTGGATTCCTGGCACGAAGGTGTGCTGGGT 5546794 30 100.0 37 .............................. GCTTCTGACGTAGCGAGTTGCTGACTGGCGCGTGAGT 5546727 30 100.0 36 .............................. TTCGCGGGCTCGCCCATCTTCGGCTCCTGAGGCTGT 5546661 30 100.0 37 .............................. CGCCAGTTTCCAAGTTGAAGCGTTGTCGGTGTACGGT 5546594 30 100.0 35 .............................. TTGGCCGGCTCGCCGAAGGCCTTGCCGTCGTTCGT 5546529 30 100.0 35 .............................. ACGATCTCGCAGCAGTAAGCCAGTGCCGGGGTCGT 5546464 30 100.0 36 .............................. TGAAACGCGCAAACCGCTACGTCGGGGTCCACAAGT 5546398 30 100.0 37 .............................. TCATGCTGCAATTCTCCTGCGCATGTCAGCCTCAAGT 5546331 30 100.0 37 .............................. AGCAGGCACGTACCGCAGGCTCTCGAAATGTTAATGT 5546264 30 100.0 37 .............................. GACAAGCCACCTACCCACTCCTACAACCCTTTCGCGT 5546197 30 100.0 35 .............................. ATGGTCCTTGCCCTGCTTCGGCGAAGGCTCCTTGT 5546132 30 100.0 36 .............................. CCTGAACCGTTGCTGATCGAGGCCGATGGCCCAGGT 5546066 30 100.0 37 .............................. ACCACGCAGACGCTGGACGGTCTCACCTCCGCTGTGT 5545999 30 100.0 37 .............................. ACCGCCACACTGGAGTTGCGTGAGCGACCCATCATGT 5545932 30 100.0 38 .............................. GCTGCCTGGCAGGCCTGCTTGAAGCCGGCCGAAAGCGT 5545864 30 100.0 38 .............................. ATCGCCGCAGACGCTACGCAGGCAGAGACCACTGCCGT 5545796 30 100.0 36 .............................. AGGCCGAAGCGCCGTGACTTGAAGACCTTGCCGAGT 5545730 30 100.0 36 .............................. TATTACGGTTCTGGGTGCAGCATCTGCGGGGGTGGT 5545664 30 100.0 36 .............................. TGGGGCGAGCTGCGCGGCAATCCGGCCGACCCCAGT 5545598 30 100.0 35 .............................. TCGATCCGTCCTACGCGCTCGCCTACGCGGTTGGT 5545533 30 100.0 36 .............................. AACTATGAGGTCGTCGAGGTCAAGACGGTGACCGGT 5545467 30 100.0 39 .............................. CGGACGCCCTTCGGGCCGAGGAGGATCACCTTGAACCGT 5545398 30 100.0 37 .............................. TTGCGCGGCTGGCCGCCGGCGGCCTGGCTGTGGTGGT 5545331 30 100.0 35 .............................. ATCTGCCACCGCGCCGAACTGGTGCTGCAGACCGT 5545266 30 100.0 36 .............................. GCGTGCTGCGCGAAACCCCGAAAGCGCACATCGTGT 5545200 30 100.0 36 .............................. TATCGCCAGTGAAAACCAGTTTCCACACTGTTCCGT 5545134 30 100.0 37 .............................. AGCGCGAAATCCCCGTTGGGAGAGAGTTTCACCCTGT 5545067 30 100.0 36 .............................. TTTTGCTCGGCTACGACTGTTCGCTCGAGCACGGGT 5545001 30 100.0 36 .............................. CAAGTCAGGCCGAAGAAAGAGACGATATAGCTGGGT 5544935 30 100.0 36 .............................. ACCTCGCCGGTGCGCAGATCGAAAACGCCGGTAGGT 5544869 30 100.0 36 .............................. GATCCGTTCTTCATGGCGGTCGTCAAGGAGATAGGT 5544803 30 100.0 35 .............................. AGCGGCTCATGGCTCCTGCTGTTGCGGAACCCTGT 5544738 30 100.0 36 .............................. CTTCTTGAGATTGTCGAAGACGAATCCCCACTTGGT 5544672 30 100.0 36 .............................. GGCTACACGTTCTTCGCACCCTCGTTAGAGGAAGGT 5544606 30 100.0 36 .............................. GGTAGGTTTCATAACTGAAAATCTAGAAAACCGTGT 5544540 30 96.7 35 ...............T.............. ACGGTCGCGCTGGCGGGATGCGCCGGCCAGGTGGT 5544475 30 93.3 0 .......................G.....G | ========== ====== ====== ====== ============================== ======================================= ================== 40 30 99.8 36 CGCGCCCCGCACGGGCGCGTGGATTGAAAC # Left flank : CATTTCTGTGGAAGTGAGGTGGCGACATGATGGTTCTGGTCAGCTATGACGTGAGCACTCAAGATGCTGCAGGTGGCAAGCGCTTGCGCCGCCTGGCCAAGGCCTGCCGCGATTATGGGCAGCGAGTGCAATACTCGGTGTTCGAGATCGAGGTGGATAGCGCGCAGTGGACATTCCTTAAGCATCGTCTGTGCAACCTAATCAATCCGGAACAAGACAGTCTACGTTTCTACTACTTGGGTACGAACTGGCAGCATCGTGTGGAGCATGTTGGGGCCAAGGTTGTACTCGACCTTAATGGCCCGCTGATTCTTTAGCGCCGGCGCGAACCTAAAGCGACCGACCAAACCCTGGGGGGTTCGCAATTCTCTAGCTGATTGATTTATAAACTCTTTCTTTGAAGTTAGGAGTTTGAAGGCGCGCGCCTTGCTTAAAGAAGGCATGTTTCGCTGAAGTAAGAGGTTTTTTTCATGCTGATCAATAAGTTATAAGAGGGCGGT # Right flank : ATAGATTTTGGGGAGTTTGTCCTGAAAAATTTTGTCTCGCCACTCTCTTCCCGGCCCAGAGTCTGGCCAGGAACTCTTGTGTCACGGTGTCGCGGCCCCAGGCCGAAAGAAAGACCAGGTTGCGCTGCTCGTCGCACACGCAGGCGTCGACGTACAGGTCTGGGCACTCTTCGATCTGGTAGAGCGGGGTGGGGCTGGGCATAGGAACCTCCTGGAAGGAGGAGCCACGCCGCCCTCAAGGGGCGGTGAAGCCCCTCGGGGTGTAGTCCAACTGGTGCAGGGGAGCGTGGTGGCTACCGAACGCTCTTGGTGTGAGGGTCGAAGCTGAGCCCATCGGCTTGGTGCAGCGGCCCTTGGCCGATCAGGAAGACCTGGCAGAGGTACTGATCGCGTAGCGCGACAGCCGCTTCGGCCTGCTCCAAGGTCAGCGACAGCTCCTCGATGAACAGGTCGATGAGCTCGTCGTCGCCGGCGACGTCGTTGTTGGACTGTTGGTCCTC # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CGCGCCCCGCACGGGCGCGTGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CGCGCCCCGCACGGGGCGCGTGGATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-7.80,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //