Array 1 6136-8112 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHRBL010000041.1 Deinococcus sp. SYSU M42101 NODE_41_length_11775_cov_80.476660, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 6136 29 100.0 32 ............................. GACGGACAACGGGTCACGTTCGACGTGGGCCC 6197 29 100.0 32 ............................. GACATTGCCCTGGCCCACTGGCTGACGGGCGA 6258 29 100.0 31 ............................. CCTCCTGGGGGCCTCTGAGGGGCAGGGCGGC 6318 29 100.0 32 ............................. GTCACGCGGCTGGGGCTGCGGATGTCCAGCCG 6379 29 100.0 31 ............................. CGGGCATAGCCGGCCACCCGGTTAGCCTCGC 6439 29 100.0 32 ............................. GCGTCGCCAATGGGCCGCAGAACCGCGTCAGC 6500 29 100.0 32 ............................. CTCATGGAGGATACGGCGGCCTTTGTCGCCCT 6561 29 100.0 32 ............................. GGCACCGGGCCGAGGGCCAGCCCCAGCACGGC 6622 29 100.0 32 ............................. TCACTAATTCAGGAAAACTACGTCCTGGCGCT 6683 29 100.0 31 ............................. GTCGGTGACGTACTCATAGCCGTTCGGCGTG 6743 29 100.0 32 ............................. GTGGGGCGGGGCGGGGGATGGGTGCGGGGAAG 6804 29 100.0 32 ............................. AATCAGCTCTCGGCATTGTCAAACCTCAGCGG 6865 29 100.0 32 ............................. GGATAACGCTAACCTTTTATGTAGAGCCGCCC 6926 29 100.0 32 ............................. ATGCGCCACTGATTGCCCATCAGTGGCGCTGC 6987 29 100.0 32 ............................. CTCATGAGCCTGGAACAGACCAACGCCGAGGG 7048 29 100.0 32 ............................. CCCGCGACTGACCAGCCCGCGAAGACTGGCGT 7109 29 100.0 32 ............................. GGCAGGCCGCCGAGGACCGCCGCAGCAAGCTC 7170 29 100.0 32 ............................. GTGGTAGACACCTTCTCGCCGTCGGGCTGATT 7231 29 100.0 32 ............................. ATAGATCCCGTGCGGGTCCCGGTCGAGCTCGA 7292 29 100.0 32 ............................. GATGCCCGGACGTGCTGCACCGCCACCGCGCG 7353 29 100.0 32 ............................. TACGAGTACCGCTGCCTGATTGACCGCTTCAA 7414 29 100.0 32 ............................. TCGTGCAGGGGCAGGGCGCGCCACTCCACCGC 7475 29 100.0 32 ............................. CGCACCTGCTCACCGCCGCACCGGAGCGCTCA 7536 29 100.0 32 ............................. TCGCTGGGCATTAACCCGCTGCCCACCAACGA 7597 29 100.0 32 ............................. GCCGCATTGATCGAAGAGGGCTTTGACGTGTA 7658 29 100.0 32 ............................. GACCCTGCCCCACCAGAGTGGGCCACAACGTA 7719 29 93.1 32 ........T...C................ AGGTCATGATTATCGTGGATGGGCTTCTAACT 7780 29 96.6 32 ............C................ ATGAACGCGGCCCAGCAGGCCGGCATGATCGA 7841 29 89.7 32 .........C.............A.C... GGTGTTCTGCGGCAGCTCCTGCGCGAGGACGT 7902 29 89.7 32 ......T...........A.....G.... CCGCAGGAACAGGTGGAGTCATCATGAGCGCC 7963 29 93.1 32 .............G..........G.... GCGGGTCCGGCGTGAGCGACCTCACCGACCTC 8024 29 93.1 32 .........T..C................ AATTCTTCGATAGTTTGACGTATGGTGACCGA 8085 28 79.3 0 .........-.C.GT..A.........T. | ========== ====== ====== ====== ============================= ================================ ================== 33 29 98.0 32 GTTTTCCCCGTGTAGGCGGGGATGTTCCG # Left flank : TTCTGACCCTGCTGGACGACCGCCACGACGATGACCCGGAGGACGACGACGTGGGCGAACTCTGGGATCCGGAGGGCAACGTCCAAGGAGGAATCAACCATGATCGTGATGACCCTTGAGCGCGTGCCGCCCAGCCTGCGCGGCGAGCTGACCCGCTGGCTGATCGAGGTGCAGACGGGCGTGTACGTGGGGGCAGTCAGTGCCACCGTCCGCGACCTGCTGTGGGACAAGGTGGTGCAGCACGCCCGCGCCGGCCGCTGCACCCAGCTGTACCGGGCAAACAATGAGCAGGGCTTTGCCATCCGCATGCACGGCGAGGGGCGCCGGACGCTGGTGAAGCTGGAGGGCTACCAGCTTGTGGCCGTCAGGGACGCCCGGTATGAAACACTGAAGAGGGACTTCCAACCTCCCGAGGAGCTTGAAACTTTGTGAAATGAATTACGCTGAGTTGAAGAGACTTCGGCGGTTGCAGCGTAAGGGTTTGTGCGTCGTTTGAGAGT # Right flank : GGACACGGCGGCTGCGCGGTTTTCCCTACCCACACAAAGGCCGCCCTGACGGGTTGCCATACACCGCGGACCCACGACCCTTATGGTAACCGCAGCGGCCGCCCACTGACGAGGAGCCACGCCTCGTCGCTGGCGGCCGCCGCACGCTGGTTCACCCAGCCCAGCAGGTCGCGGTAGCGCCGCGCCAGGACGTTGTCGGGCACGATGCCGAACCCCACCTCGTTCGTCACCAGCACCGTCAGACCGCCCCGGACCTGGGCGGTGGCCAGCAGGGCGTCGGCCGCTGCCAGCACCGCTTCGTCGGGCCAGTCGGCCAGCATCAGGTTGCTCACCCACAGGCTCAGGCAGTCGAGCAGCACCGCAGGGGTCGAGATCGCCGCCAGCGCCCCCGGCACCGCCAGCGGCTCTTCCACCGTGGCCCAGGCGGCGGGCCGGTCACCCCGGTGACGGGCAATGCGGGCAGCCATCTCGTCGTCAAAGGCTTGGGCGGTGGCCAGATA # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGTGTAGGCGGGGATGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.40,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-19] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 5826-8881 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHRBL010000013.1 Deinococcus sp. SYSU M42101 NODE_13_length_107225_cov_82.219226, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 5826 37 100.0 35 ..................................... CTTGACGCAGCTGGTGACCCTTGGGCGTATCGCGC 5898 37 100.0 32 ..................................... CCCAGCGGGGCCCGGCGCGGGGGCTGGGGCTG 5967 37 100.0 36 ..................................... CGGGCAAGCCCAGCGAGGCCCTGCGCGGCGTGCTGA 6040 37 100.0 35 ..................................... TGGCCCAGCCCGAAGCGGTCCCGCAGACCACGCGA 6112 37 100.0 36 ..................................... GCACGCTGGACCAGCAGACGGCCGCCAGTGCCAGCG 6185 37 100.0 35 ..................................... CCGAGGACATTGGGGTGAGCCTCAGCCGCGCCCTG 6257 37 100.0 35 ..................................... ACGTCGCCCAGAAACACGACACTGCTGCCTTCCGG 6329 37 100.0 34 ..................................... GCTGTTCAAGTCGGAGCAGGAAGGCGAAAACGGC 6400 37 100.0 33 ..................................... AGCAGTGTCTGCAGGAAATCGAGAAGCTGAGCG 6470 37 100.0 35 ..................................... CCATCGGTGACGAAGGCGGGAATATACGCGTCAAG 6542 37 100.0 35 ..................................... CCATCGGTGACGAAGGCGGGAATATACGCGTCAAG 6614 37 97.3 34 ..................A.................. GTGTTCAGGCCGCTGCCAGTCGCCACGATGCACT 6685 37 100.0 35 ..................................... CGGCGCAGCTCGTACATCAGGCAGTGGAACGTGAG 6757 37 100.0 34 ..................................... AGCTTGTGGAGGCGCAGTTCTTCGGCGGTCAGGG 6828 37 100.0 35 ..................................... TGCCCGTTGAGCCACAGGTCATCGGCGTTGATGGC 6900 37 100.0 34 ..................................... TGCTTCCTCTTCGGCCTCTGCTTCAAATTGTGTG 6971 37 100.0 34 ..................................... CGAACGTGAATCACGTGCATCTGGCCGGCGGGCG 7042 37 100.0 34 ..................................... ACCGATACCCTGACGGTGGTGGTGCCGGGGCAGC 7113 37 100.0 33 ..................................... AGGGCGCGGACATAGCCCATGTACCCTGGCACG 7183 37 100.0 34 ..................................... TCCATGCTGAGGGCGCCCACGTAGGTGTCCCCGT 7254 37 100.0 36 ..................................... ACCCGTGTCTGCCCGTGGTGGGCGCGGGCTCGCTGC 7327 37 97.3 35 ..........A.......................... CCGTTGATTAAGAAAGCCCCCACCCCCAGGCCTGG 7399 37 100.0 35 ..................................... ACCCGTGTCTGCCCGTGGTGGGCGCGGGCTCGCGT 7471 37 100.0 31 ..................................... GCACGTCCACCCTGCGCATCCGCACCGAGGC 7539 37 100.0 35 ..................................... CAGGTATCCGTGGCGCTCACGGGCTTCGGCAATGA 7611 37 100.0 36 ..................................... AACTCACCCGCGCCGGCCTCGCGCTGCACCGCTGGC 7684 37 100.0 37 ..................................... CAGGTGACCAGGGCCCACAGTACCTGCTGATCGGGGG 7758 37 100.0 34 ..................................... AGCGCAGCCCGTAATTCCCGCCGCCCTGGTGCAG 7829 37 100.0 33 ..................................... CTGGGGAACTGAATCAGGATGCGGCCCCCAACC 7899 37 100.0 37 ..................................... CGGTGAGCGGCATCAGGTGCCCGTGTTGCCCATCGTG 7973 37 100.0 34 ..................................... CGCATGGTGGTGGGCGTGGCGTACAGGGCCAGCA 8044 37 100.0 36 ..................................... CTCGAAAAACGCGGGCGTTTCGGCTGGGCGGGTCTT 8117 37 100.0 35 ..................................... ACTGCGGCGCGCAACTACGCCGCCGCTGGCAACGA 8189 37 100.0 37 ..................................... GCCAGCGTCCCACCCAGCGCCAGCAGGATGCCTCGAA 8263 37 100.0 36 ..................................... AGGCCTGACCACCACAGCATGACGTGCGCGACCTCG 8336 37 100.0 37 ..................................... CGTGCCTCTGCAGGAGGTGAGGGCCTATGCCCCGGAG 8410 37 100.0 34 ..................................... TGACGCGCAGGCAGCGGCGAATGCCAAAGCCGAC 8481 37 100.0 36 ..................................... TGGTGCATGGCGGACAGGTGTTCTATGAATACGTGA 8554 37 100.0 35 ..................................... ACGCAGTTGCCAGCCCGGACTGCGCGGATGAATTT 8626 37 100.0 36 ..................................... AGTAGCTGTACATGCCCCACTCGGTGAGGTTGCCGT 8699 37 100.0 36 ..................................... CGGGCAGATCGGACAGCTGCGTGCCCACCTGCAGGT 8772 37 100.0 36 ..................................... AGCAGGGCCAGCCCCAGCAGGGCGCCGGCGATCACC 8845 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 43 37 99.9 35 GTCACAGCCCGCCTTCGGGTGGGCTGAGGATTGAAAC # Left flank : CCTCCACAGTGTAGGGGCGAAGGCGGTGTGCCCTCGCCCCTTGCTCCTGGCGTTTAGCCGCCCACTGGATAGGTGCCCTCATCCAGTGGCATCGGCTGAGTCTCGCCCGGCACCGTGGTGGGCGGAACCTTCACCAGATGAGCACCAGCACCCCAGACCAGGACCAGGACCAGCACAATTGCGTTCATAATTGACTCCTGTCGCGGAAACGGCTGCTGACCGTTGTCCGCGTGTACGAACCCGTCTGGGTTCGTGTGCAGGAGCTTGAAATCCTGGCGCGACACGCCATGTCGAATGACTTTCGCAGGGCCACAGTGGCGCCGCGAACCTGCTGTGACGGCCTAACCCCAGGGGGTTCGCGCGGTTCTAGAAAAGCCGCCTGGGCCGACAAGTTTCAGAACAGGGCAATTAGAAAAGCAGAGGCTTTAGACTGCCTCCGCAGACACTTCGCGCAAACCACCCGAAAAGTTGCCTTCTGGACGTGTGCCAGGCAAACTACT # Right flank : CAGGCGGAAGTACCCGATGGGAGGGATGCGGCCCCCGTTGCAGCCGCCTTAAGGTGGACTGTAATTACAGCTTTCCCACTATCATCACGCCCGCCACCCTGCTTTGTCCGCTCACAAGTCCCCATTTCCGCTTGCCGGATGGTGTCCACAGGCCCCCTCGAAATCCTCCCCCCCTTCCCGAACCAAATCTGCTCGTCATGTGACGAGCAAACGGCCCCCACCGCTCTACGCCTCATCACTCGCAAAGGCCAGGTACAGCCGGGCAAGCAGAGCAGGGTGGTTCAAAGGTTGTCCCAGGACCTCCTCAGCCCTCTTCAAGCGGGCGCGGATCGTGTTGACGTGTACACCTTCCGCCTGCGCCAGCTCTGCCAGGCTGCCAGGATGGTAGAGATAGTGCCGCAAGGTGCGCTCAACGCGTCCGCCATCGTTCAGTGCGGCCAATTGGGTCAGCACTTGCACCCTGAGCGTGGTGAGCGCGCCGCTGTCCAGCAGGTCATGAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACAGCCCGCCTTCGGGTGGGCTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-15.90,-11.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.41 Confidence: HIGH] # Array family : NA // Array 1 7406-11032 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHRBL010000015.1 Deinococcus sp. SYSU M42101 NODE_15_length_81856_cov_80.416529, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 7406 29 100.0 32 ............................. AACAGGTTCACCGCGAGCTTGGGATTGGCGCC 7467 29 100.0 32 ............................. ACCAGATCAACACCCGCCTCGCGTTTATGCTC 7528 29 100.0 32 ............................. CGCTGGACGCTGGCGGGCACCGGCCGCGTCTA 7589 29 100.0 32 ............................. CCGCAGGGGCCGGGCCCTGACGACGTGGCCCA 7650 29 100.0 32 ............................. CTGCGCCAGCTGCAGTTGCAGCAGGAAATGGC 7711 29 96.6 32 ............................T TAAACAATGCCGCCCTCAGCATGAATCCATTC 7772 29 96.6 32 ............................T GTGGAGCACACTTCCCGGCCGGATGCTGGCTG 7833 29 100.0 32 ............................. GCGTGTACGTCATCCGCCACCGAGACCGGGCC 7894 29 100.0 32 ............................. TCGCAATTACCATGATGGTGGTACTACGGTCA 7955 29 100.0 32 ............................. GACCGTGAACGCCTGGAACTGGCCTACAGCGC 8016 29 100.0 32 ............................. AGGCATGAACGCAAACGCGCCCCAGACCGAAC 8077 29 100.0 32 ............................. AACCTGGGCTGGGAAGGGGGCGCGGAGATCGT 8138 29 100.0 32 ............................. CCGATGCGGCCCTGGGCGCCGTCGCGGTAGTC 8199 29 100.0 32 ............................. GTGGCCCGGCCTGCAGCTGCAGCACCAGGTGC 8260 29 100.0 32 ............................. AGGCGTACTGGTATCAGGACGGGTACGAGGAC 8321 29 100.0 32 ............................. ACCCAGAGATGCTGGACACCCTGACCACCACA 8382 29 100.0 32 ............................. GCAACACCCTGCACAGCGGCTATGACCTGACC 8443 29 100.0 32 ............................. TAGCTCGCCGCTCTGGGCGGGGCGCAGCGTGG 8504 29 100.0 32 ............................. CCGCTTGTGGGTCCGCTGCGCGCTGCGCATGG 8565 29 96.6 32 ............................C ACATCCGCACCCAGGGCGCCACATCCGGCAAC 8626 29 100.0 32 ............................. ATGTTGCCGGTGCGGCCCCGGGGGCGGGCGTG 8687 29 100.0 32 ............................. GAGCTGAACGCCCTCAACCGCCAGCTGATGCG 8748 29 100.0 32 ............................. ATGTTCTAGGCGCGGCTTTCGTTGCAGCAGGT 8809 29 100.0 32 ............................. CCCTGGCTCAGCAGCTGCCCGCCTTCGCCCTG 8870 29 100.0 32 ............................. CGTGTAATCATCTGGCGAGCCCCCAGGGGCCC 8931 29 100.0 32 ............................. ACGCGGTGATCGGGCACGTGCGCTGGGTGACG 8992 29 100.0 32 ............................. GTGCTGGTGCCGGCGTTCAGGTCGTACTCGTC 9053 29 100.0 32 ............................. CTGATGGCCTTCGACCAGCGCAATGGCCTGGA 9114 29 96.6 32 ............................T TTGCCCAGGGGCAGGCCCACCGCGACGGAGAG 9175 29 100.0 32 ............................. ACGGGTACGTGCCGCCCAGCACGCCCCAGCAA 9236 29 100.0 32 ............................. CACCGGACTACAACACCGAGCCCAGCATCACG 9297 29 100.0 32 ............................. GTCAGCGACCAACTGGCCAGCACCGTGGGCCT 9358 29 100.0 32 ............................. TCCGAGGCGTTGACCGGGACGTAGGCGGTCGT 9419 29 100.0 32 ............................. CCCCCCAGACCCGGCGCCTGGAGTGGGTGTAC 9480 29 100.0 32 ............................. AACATCAGCTACTGGGAGGGCGAGCTGGCCCG 9541 29 100.0 32 ............................. AGCCAGATTGAAATTCCCGCCAAGGAAGGCGC 9602 29 100.0 32 ............................. TTGCGCGTGGGCGGGCAGCTGGGGTCCACGCG 9663 29 100.0 32 ............................. ACGTGAACCCGGGGCGCGGACAGGCAGGGTGC 9724 29 100.0 32 ............................. CCCCGCAGGCCCCCGTGCTCGGCCAGGCGCTC 9785 29 100.0 32 ............................. TGGACTCGCCGGCCGAGGTGGTGCATCTGCGC 9846 29 100.0 32 ............................. AATCCATGTAGCGCCTTCATCGTGGCTGACAA 9907 29 100.0 32 ............................. GGAGGGCTGAGACATGGCCACACAGCAGGGCG 9968 29 100.0 32 ............................. CGCGGGAATCTGGCTAATCCGACCCAATGAAC 10029 29 100.0 32 ............................. CTGATCGGCGGCCTCATCGAGCTGGCCCACCG 10090 29 100.0 32 ............................. CTGATCGGCGGCCTCATCGAGCTGGCCCACCG 10151 29 100.0 32 ............................. CCACCGGGCGTAGTGGTGTCAGGCGCGGTGTC 10212 29 100.0 32 ............................. GTAATGCCTTCGTGCTCGAACCCTTCCCCGCA 10273 29 100.0 32 ............................. AGGGGCAGAACCGGGCCTGGGACGCCGTAGAC 10334 29 100.0 32 ............................. ATCAAACTCGGTTTTGCCGGAAAGGCGGGCGA 10395 29 100.0 32 ............................. ATCAAACTCGGTTTTGCCGGAAAGGCGGGCGA 10456 29 100.0 32 ............................. CAGAGCGGGTACGCCGGGTGCAGGAGGCCTAC 10517 29 100.0 32 ............................. GTGCACCGCCTGCCCACGGGCTACAGCTTCAA 10578 29 100.0 32 ............................. CAACCTCTCCCCACCGCCCCCGCCCGCCCTGC 10639 29 96.6 32 ...........A................. GCCGCCGCGCGCCTGTGCCGCCTGGGCTACCT 10700 29 100.0 32 ............................. GAACACTGCGAGAAGAATCTGGCTCGACTGCG 10761 29 93.1 32 ...C.........G............... CCGCGCTTGATGTAGCCCAGCGCCTTGTGGAT 10822 29 93.1 32 ...........A.......A......... CCCCAGCCAGTACAGGGTCACGAGCTTCCAGG 10883 28 89.7 32 ....C........-.............T. ATGAACCGCCCCGGCTTCGGCAGCGGGCGCGA 10943 29 89.7 32 ........T....G......A........ AAACAGGCCGCTGCCCAGCGCCTGAGCCTGAC 11004 29 86.2 0 ....C........G..T...........A | ========== ====== ====== ====== ============================= ================================ ================== 60 29 98.9 32 GTTTTCCCCGTGTAGGCGGGGATGTTCCG # Left flank : GCGTGCCTCCCTTGGTGTCGTCTCCGGCCGTCACCTGTCCCGCCTGGATTGACGACACCGTGGCAGCAGACAGTGCCGCGAACCCCAGACAAAAGACGACCAGCACCGAACGGAACGAAAAGGCAATTTTTGACATGGCAACCCCTGACATGGCCCCACTGGGGTCATGGATGGCGAAGGCGGCCGGGCAGCGGGAACGACGTACGCTCGCTTGCACCGCAGCCCGGCAAGCCGGGCGGAAAGTGTGGGCTCACCGCCACCTGATCAGGGGAGAAGGTGCCTGGGATGGACCTCTCTGGCGATAAATTCAGCTTGGAGGGGATAGGCGTCCAAACGTGACATCTGTCAAATGCGCCCGCGCGCCTTCCCTTGTTGGGGAGCTGGTGGATTTACGCTTTGAGACGGCTAAGGCCGGGGCGTATGAAAATGTAAGCTGTATCCGCTCGTGTGGGCGAGGGTTGGGGCTGGGTTTTGAGAGAAAACTGCTGGCCTTGCGAAGT # Right flank : ACCTTGTCAAAGCCGCCTTAGGATACCCCAGGGCGGCTTTGGGCTTCACGCTTAGCCCGGCGCGGCGGCGTGGGGAAAGGCGTACAGGTGCCCGCTGCGCAGCCCTGCGCCCAGCAGGTCGCCGGCGGGGGGGCGGTGGGCCAGCGGCTGTGGGGCCCGGCCCGGCGTGACCAGCGCCAGTGGGGCGCGCAGCAGCCCGTCGGGCGTCACGTGCAGGTCACCGCGCGTACCCCGGAACGCCGCACCGCCCAGAGCCGCCACCAGCCCCAGCGGCGTGACGGCCGGCAGGGCGGCGGCGGCCTGGGCCAGCCAATTCCCCACATCCTGGCCCAGGGCGGCGGCAGGGTGCAGGCCGTCTGCGGTCTGGGCGCGCACCTGCTCGGCGCCGTGGCCCAGGCTGCCCACACTCAGGCTCAGGCCCAGGGCCTGCGCGGCCCGGCGCACCAGGGCCGCGTGCGCCTGCGCCGAGTCCTGCAGGTGCAGGTGGCGGGCGCCGCGCG # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTCCCCGTGTAGGCGGGGATGTTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-11.40,-8.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-15] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-36.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 74594-72908 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHRBL010000017.1 Deinococcus sp. SYSU M42101 NODE_17_length_80386_cov_82.004385, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================== ================== 74593 37 100.0 36 ..................................... ACGACAAGCTGGACAACCGCCGCGCCGCCCTGCGCG 74520 37 100.0 34 ..................................... ATTGGTCGCGCGGAAGGGCAGATTTGCCGGTGCT 74449 37 100.0 34 ..................................... CCGAGAGTGCGCACAGCCAATGGCGCACCTTCCG 74378 37 100.0 34 ..................................... TTCGCCCAGCTGCGCGGCCTGCTTCAGGGCCTCG 74307 37 100.0 34 ..................................... CGGTTGAAGTGGGGGGGGTGCGCCCACAGCGGGA 74236 37 100.0 33 ..................................... AGATTAAAAGCATAGTTGGGCCTTATAACATGC 74166 37 100.0 33 ..................................... ACCTCGTAGTTGCGGGTGCGCCCGGGGGCCTTG 74096 37 100.0 34 ..................................... AGTCGGGCGAGGTACGACGCCCCCCGCGCCTGCA 74025 37 100.0 34 ..................................... CACCTCCAACGGCCCGAACTGGACCTCAAACTGC 73954 37 100.0 32 ..................................... ACGTGGTTGGTTGTGAGCGCACCGGCCTCCTC 73885 37 100.0 34 ..................................... ACAAACTCACCCCCAAACTGCGAGAGCACCACGG 73814 37 100.0 36 ..................................... ACGCTCAGCAGCCGCACGCCGGTCAGCGAGCCGCGC 73741 37 100.0 34 ..................................... GTCTGGTGGGGGATAAGCCGCCGGAGGCGGGGCA 73670 37 100.0 36 ..................................... CAATACAAACCAATGTTTCCGCGCCCAAATGCCCAC 73597 37 100.0 34 ..................................... TGAACGACGTGGGCACCCACGACGACAGCGGCGC 73526 37 100.0 34 ..................................... TACTGCTCGGCTCTGTCGCCCTCGCCCAGGACGT 73455 37 100.0 46 ..................................... CAGATGTGCAGGTGGGCCAGCTTGGTGCCACTGCTCGGGTCGTATT 73372 37 100.0 33 ..................................... GTATATATTGGCGTCAACTCATCAAATCTAGCC 73302 37 100.0 34 ..................................... AGCTGGGCCCGGTACCGTCAGCCCCTGGCGGGTA 73231 37 100.0 36 ..................................... CGCTGGGTGCATTCCGTGAGCGGCACCCCGAACGGC 73158 37 100.0 34 ..................................... ACCCTGGAGAAGAAGGAGTTTGTGCAGTACCTGA 73087 37 100.0 34 ..................................... ACCCGCAGCGTCACCGCGCGGCCCAGCCGCGTCA 73016 36 91.9 36 .....A................-.T............ CCCTGGGAGGCGGCAGAGGTCTTCGAGACCTGCGCC 72944 37 86.5 0 ...............AAA......T...C........ | ========== ====== ====== ====== ===================================== ============================================== ================== 24 37 99.1 35 GTCACGGCCCGCCTTCGGGTGGGCCGAGGATTGAAAC # Left flank : CGCCGTACCTGCACCGCTGATGCTGGATTTTCTGGTGTGCTACGACGTGAATACGGAAACGTCCGCCGGGCGCCGCCGCCTGCGCCGGGTGGCGAAAGTCTGCACCTCGCACGGGCAGCGGGTGCAGAACAGCGTCTTTGAGGTCAGCGTGACCGACGTGCAACTCCTAACCCTCCGCGAGCGCCTGCTGGCCGAGATAGACCCTACCGAGGACAGCATTCGGCTGTACCGCCTGCGCCAGCCGCGCGACAAATTTGTCGAAGCGTACGGGCGAGACCGGTACGTGAATTTCTCCGATCCCCTGATTCTGTAGGTTTGCCCCGCGCGAACCCTCCGCGACCAAGAAACGCCGGGGGGTTCGCGTTGTTCCTGATTCGCGCCTGGGACGGGTTGTATGACAACTTGAAAATGCAACAAGTCTCTGGAGCTGGAAGGTCAAGAGAGGGTTCGCGCAGAGGGACGATTTGACGCTGTCCTGGTGCGGGTCGAGTACCATAACT # Right flank : TCAACAGCGGCCGAGGCGCCCAACCCCGGCCGCTGTCACCGCCCATCACAACCGTGTCCGAATCTCCCACAACTCGGGGAACAGCACGGTTTCCAGGGCGCGGCGCAGGTAGGCGGCGCCGCTGGTCCCCCCAGAGCCACGCTTGAAGCCGATGGTGCGCTCCACCGTGGTCATGTGGTTAAAGCGCCAGCGGCGGAAGTTGTCTTCCACGTCCAGCAGCTTTTCGGCCAACTCGTACAGGTCCCAGTAGCGCTCCGGGTCGCGGTAGACCTTCAGCCACGCATCAAGCACAGCTTCATTGAGCACCGGGGGCTGGCTCAGGTCACGCTCCAGGACTTCCTGCGGAATCGGGAGGCCGCGTGCGGCCACCAGCCGCAAAGTCAGGTCGTAGACGCTGGGGGCCTGCATGGCAGCTTGCAGCGGCCCGTGCAGGTCGGGGCGGTGCTCATGGGGGCGCAGCAGGGCTTCAAAGCGGTTGCCCAGCAGGAATTCCACCATGC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCACGGCCCGCCTTCGGGTGGGCCGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-13.50,-18.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [28.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : NA //