Array 1 874441-871544 **** Predicted by CRISPRDetect 2.4 *** >NZ_FTOL01000001.1 Chryseobacterium ureilyticum strain DSM 18017, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 874440 47 83.0 30 ...C.A..CC.....T....T..G...........G........... GCATAGAAAAGACGATCACCTCAATTTATA A [874436] 874362 47 100.0 30 ............................................... CGTTCCTATTACATTACCCCAAAGCCTACC 874285 47 100.0 30 ............................................... TTCTGGGTTTGAAGAGCTTCCAAATTTTGA 874208 47 100.0 30 ............................................... ATTCATTAAAAATTACAGAAGATGGCAGGT 874131 47 100.0 30 ............................................... CATTATTAATTATTTACTATAGTAAATTTA 874054 47 100.0 30 ............................................... GAATTGTGTCTTAAAACCAATTGAGAAACT 873977 47 100.0 30 ............................................... CCTGGGCGTTTAAAGCTATGCTTATAAATA 873900 47 100.0 30 ............................................... TAGAAGAATTAAGGCAAAGGGGAGATTTGC 873823 47 100.0 30 ............................................... TTCAATGATATTTTTGATGTTTCCAAATAT 873746 47 100.0 30 ............................................... AACGGTAAAATAATGCCTGATAAAGAAGCT 873669 47 100.0 30 ............................................... TGGAGCTTCAGGAGTTCTTTCAGTTGTTTG 873592 47 100.0 30 ............................................... TGCAGCAGCTTTTGCAGATAAGAGTGGAAA 873515 47 100.0 30 ............................................... CTTCATTCCTCTCAATAAGCCCCAGCTTCT 873438 47 100.0 30 ............................................... TGACAGGTTCATCTTCTGGTGTTGTTTCCT 873361 47 100.0 30 ............................................... CTTCATTCCTCTCAATAAGCCCCAGCTTCT 873284 47 100.0 30 ............................................... TGACAGGTTCATCTTCTGGTGTTGTTTCTT 873207 47 100.0 30 ............................................... ATATGAACTTCATAGAACGATTTAAACGCG 873130 47 100.0 30 ............................................... AATTACAGGCGATGATAATTAACGAATTAA 873053 47 100.0 30 ............................................... ATGAAAAACGAACTTTTAAAACCGGAATAA 872976 47 100.0 30 ............................................... ATTTTGTCATAAATTCAAGCTGAAGTTTCC 872899 47 100.0 30 ............................................... TGTTGTGAGTAGCACAATAAGCTACTTACT 872822 47 100.0 30 ............................................... CCCTGCAGCAAACTGATGGTATGGAAGTCT 872745 47 100.0 30 ............................................... ATTATTAGATAGAAACATATTGAATTAATA 872668 47 100.0 30 ............................................... GTAAAACTGCAAAATCAAGATAATCATACA 872591 47 100.0 30 ............................................... ATCATAAGCAATAATATCTTCATCATTAAC 872514 47 100.0 30 ............................................... CGGAGTTGTCAGAAATAGATTCCTTGATCC 872437 47 100.0 30 ............................................... TGATGTCTTAATCTCCACCCATAAGGAGCG 872360 47 100.0 30 ............................................... TTTTCACTTCTTTTATATCTCCATTTTCTT 872283 47 100.0 30 ............................................... GTAGACTGCCCGGAGAGCGGACAGGCTTTC 872206 47 100.0 30 ............................................... CAGATACCGAAAAATACCTTGAAAAAGAAA 872129 47 100.0 30 ............................................... TAATAACAGGATTATACAGAGTTTGTGGTT 872052 47 100.0 30 ............................................... TGTGGTGCAAGAAAGCTAAATTCTTGAAGC 871975 47 100.0 30 ............................................... TCTGGCAGATAAAAGAAACTGCCGCCTGCT 871898 47 100.0 30 ............................................... ATGTCTGTCTCTCGGTTATATGGATGGGGT 871821 47 100.0 30 ............................................... AATTTTATTTGCGTGTTGAGAATCTGAGAT 871744 47 100.0 30 ............................................... CGAAATAAGAATTTCAAAGCCTGGAAAGGT 871667 47 100.0 30 ............................................... CTTATTTCTCTCTTGGAGATTACGTGAAAA 871590 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 38 47 99.6 30 GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC # Left flank : TATTACTGTGTGCTCCTGCTTCAATAATCACTGTAGAGAAAGATTTCTTATCTCCTTCTGCTCTTACATGGATGTTGGTTCCGTTAACGTTAACGAGTTTACCCGGCGGAACAGGTTTTGGGCTAAATAATCGATAACAAAGCCCTAAGAACAATAATACGATTAGGATTCCCAGGATAAGCTTGCCTAAAAACTTAAATACTTTTAAAATTGATTTCATGGTTATTTTTAAATTTCAAATTGACAGGGGGAAGAATTGTCGAAACAGAATATTCACGAAAACCTAAATGGGATTTGAGTAAATATATTAATTGAATCTTTGAATTAGACATGATTAGAAGTTTCGGGCAAATATAACAAAAAGCCCTATGAACAGAAACCTATATAATATCATGTGTGTGATGGTTAGATCTTTAAAATTGGAAAATAAATCAAGGAATGACTGGAATAAATTTGAATATATTTTGTTCTGTTTTATTTGACTTCTCTATTTTGTAAAT # Right flank : CTCAAAAAACAACCTACTGATAATCAGTAGATTGTTTTTGTTTTTAGGATTCAAAATTTAAAATAATTCAAGCTGTTGGAAGGCTGGAGGTGGTTCTTCTTTATTTCTGGCAAAAAATATTTCAATATCTCCAAACTGTTTATCAGTAATGCACATAATTGCCACTTTTCCTGCTTTTGGGAGCATAAATTTTACTCTTTTAATATGAACCTCAGCATTTTCACGACTTGGACAATGCCTTACGTACATTGAAAACTGAAATAGTGTAAAACCATCATCAAGCAAAGATTTACGAAAGCGATTCGCATCTTTCATATTGGCTTTAGTCTCTGTTGGTAAATCATATAATACTAAAACCCACATAATTCGGTAAGCATTAAACCTTTCGGCATTCATATCAATTCAGGATAAGAGATCATTCGTTTTTCTCCCGTATAACATTTATACAGTGACGTGGCGGTTGTTTTTACTGCAACCAATAAAGGTCTTGTTTTATCCCC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.60,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 2 1262724-1263155 **** Predicted by CRISPRDetect 2.4 *** >NZ_FTOL01000001.1 Chryseobacterium ureilyticum strain DSM 18017, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 1262724 36 97.2 30 ....................C............... TCAACTAAGAAATAAACTAAACTAAGAAAC 1262790 36 97.2 30 ..................................T. GATTCTGTACTTGAAATGATGGTGGAAGTT 1262856 36 97.2 30 ..................................T. TACACACAATTTCCGGACGATTCTCAGAGC 1262922 36 97.2 30 ..........A......................... TAAAAATGAAAAATCCATCGAAAACATTCA 1262988 36 100.0 31 .................................... CATTTTCGCTGTCTACGATCTAGTCCAGGAG 1263055 35 88.9 30 ..........T.....-......A...T........ TTCAATAAAGCTTTCTAGAGCATTAATCAC 1263120 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 7 36 96.8 30 GTTGTGAGTACCCTTCAAAATGTGATACTTCCCAAC # Left flank : TCTCCCAAGATAAATCTAATAGCAGCCTTTACATTTACTTTTATCAACATATACTTTATTCCCGGATGGATTGGTATAATAACAACTTCCTTTATCCCTCACATGTAAGTATGACCACTAAAAGAACATCCTTACTTGCCGTCATAAGATACAGAACCAATGAGAAAGGCTAATATTAGATTATTTTTCATTATACACTTATTATTTATTGCAAAAATATATGACGTTATCAATGATAAAATATGGCTACCCGTAATTCTGCCTTTTTACTGATAATGGATTATTTTATCAGTATCATCTCATCTTTGCTGTACAATTAATGACTCTGGGCCCGCCCCGCTTGATCAACATTCCTCACCCAAAGCATCAGGCAGGTCGAGCTATCCGCTATATCTTTTGCAACCACAAAAGAATACCTCTCCTATCTACTCAAGCAAATATAATCCAACAAAAGATGCTAGTGCAAACCTTTATGATGAATCATTATCCAAGGTTTAGTC # Right flank : CTCAGCCGTGACTTTTTGATAGAGCAAATTGTTGTGAGTATCCTTCAAAGTGTCCAATAAATCTATAATTGTGCAACCATCTTTTTCAAAATCATACCCTAAAAGTCCAACAGTTCTGGAATTGCAAACCGTATAAATTCAAGATAAACCGAAGAAGCAGTCTCACCTTGAATTTGTGGATATTTCTCCCTGATAAATTCATAAAACTGTCTTTTCGGTAGATTATTGTGTGCAAACTGATTCCTGATCAGAACAACCAAAAAAGCAAGTTGGACGGTTGCAGGTTTTTCATCAAGCTGATCTTTGCTTAACTCATTAAACTCGTTTTCATCACAATCTTCAAGCCACTGGATATCATTTTCATTTATATTAGCCCTTTTTCTTAAAACTCCATTTGCTATATATTTTTTGAAATTTGGGTGTCGGATGCCCTTTTTGTCGCTTACTTCAAATTCAGCCGGATGGGTACCCCCATCCCACGAACACTTCTCAAGGATAAC # Questionable array : NO Score: 5.66 # Score Detail : 1:0, 2:3, 3:0, 4:0.84, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAGTACCCTTCAAAATGTGATACTTCCCAAC # Alternate repeat : GTTGTGAGTACCCTTCAAAATGTGATACTTCCCATC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTGTGAGTACCCTTCAAAATGTGATACTTCCCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.40,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //