Array 1 294068-292711 **** Predicted by CRISPRDetect 2.4 *** >NZ_RBXB01000001.1 Chryseobacterium defluvii strain DSM 14219 Ga0104529_11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 294067 47 91.5 30 AG.....G...T................................... ATCCGGATGCAATTTCCAACATGCTTGCCA A [294046] 293989 47 100.0 30 ............................................... ACAAGACTATAAAGATGCGGCTGCATTGCT 293912 47 100.0 30 ............................................... AGTAAGTCTGATCAATCATCATTGGTTCGT 293835 47 100.0 30 ............................................... TCAAAAGTTGAGTTCCAATCCGAGTAAGCG 293758 47 100.0 30 ............................................... AATATATCTATACAGATGCCGAACAAAAGC 293681 47 100.0 30 ............................................... AATAACACCGCGCGGTTAATTACCGAAGCT 293604 47 100.0 30 ............................................... TTGATACCAGTTTTCGTGAACTCAACTTCC 293527 47 97.9 30 ...............................A............... GGGCTGGAAACAGTGATGGAGGTATCAGCA 293450 47 100.0 30 ............................................... TTAAGAATGAAAAAGGCGATCTGATCCTTA 293373 47 100.0 30 ............................................... TGAGTAACTTTACGACTTGTAATAATTTTA 293296 47 100.0 30 ............................................... ATATAGGGGCTAAAGTTGGCATACCTCTAA 293219 47 100.0 30 ............................................... TAACAGAACCTTTATCATCATAATCATACC 293142 47 100.0 30 ............................................... CACTAATCCCAGTAGACGCATCAGGAAGAC 293065 47 100.0 30 ............................................... GATTTAGAAAAGATCCCCGCTTCAGCATTT 292988 47 100.0 30 ............................................... ATTTCATCAAAACAGGTCCTTGAGACTATA 292911 47 100.0 30 ............................................... GAGTGGGACACCGCTACCGGATGTGTTACT 292834 47 100.0 30 ............................................... AACCCTATAGATGTTCATCCTGTAAAATTA 292757 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 18 47 99.4 30 GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC # Left flank : CAGTTAATTACGTATATTTTATTGGAGAAAAAAGATTTGATGAAGTCTATCCATTTTATGAAATGATGAGTTCTCATATTGGCCGTAAAACCTTCATAGTAAATAGTCTATATTTGGGTATTCCAGCTGAAGTAATAATGAAATGGACTGGACATAAGGATTATCAATCAATGAAACCTTACATTGCAATTGTAGATGATTTAAAAAAATCCGAAATGAATAAGTTCAATAAAAAATAAGATTTTATACACAGTTTTATACACACTTTTTATAGCTTGAATAAGATTATTAAAGATTGATAATAAATCGTTTTAGCTTTTAATAAAGCATTTCAATTAATAATGATTTAATATAATTTATAAACATTGATCCCTGTGGGTCTACAATCTGAAATTAAACCACTTGATAATCAAGTGGTTTTTATTTTTTTAGTCAACCATTAGTCAATAAGTTTATTCTTATTTTCATAATTGACCTCACTTATTTATGAAATGCTAATA # Right flank : CTCAAAAAACAATCTATTGATTTTCAGCAGATTGTTTTTATTTTTAGAATTTAAAATTTAGAATAATTCTAGTTGTTGGAAGGTCGGAGGTGGTTCTTCCTTATTTCTGGCAAAGAAAATTTCGATGTCCCCAAATTGTTTGTCTGTAATACACATAATAGCAACTTTTCCGGCTTTAGGAAGTATAAACTTTACTCTTTTGATGTGAACTTCAGCATTTTCCCGGCTCGGACAGTGACGAACATACATTGAGAACTGAAATAATGTAAAACCATCGTCAATAAGCGATTTTCGAAAACGATTCGCATCCTGCATATTAGCTTTAGTTTCGGTTGGAAGATCATATAATACTAAAACCCACATAATTCGGTAAGCATTAAACCTTTCGGCATTCATCTTAGTTCAGGATAAGATATTAATCGCTTTTCACCTGTATAACATTTATAAAGTGACGTTGCGGTTGTTTTTACTGCAATCAGTAATGGTCTGATTTTACCACC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.60,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.5 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //