Array 1 79937-78408 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKPO01000017.1 Acinetobacter bereziniae strain TUM15327 sequence17, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 79936 28 100.0 32 ............................ AAATTTTTTGTTATAAATCAGCCACTTATCAT 79876 28 100.0 32 ............................ ATCTCATGAAGATTGCAGATTCCGTTTAAATA 79816 28 100.0 32 ............................ TGCAATCTTTGGTTCAAGAACAGAAAAAACAG 79756 28 100.0 32 ............................ TTGATACTTCCTACCCTCTACGTGGTCTACCC 79696 28 100.0 32 ............................ ATACCAATCCAATATTCCATTTAAAAGCACCC 79636 28 100.0 32 ............................ CACTGATCACATGCTTGAACTGAGACAAATTC 79576 28 100.0 32 ............................ ACTGAAGAGAAGGGAGGGTCTGTAGGGAGTAT 79516 28 100.0 32 ............................ TCAATACCTGAACATACTGATCCGTATCTCAT 79456 28 100.0 32 ............................ TAAAAAAACGCTGGCTAGAACGCAATGGCGTA 79396 28 100.0 32 ............................ GACAACTGATTCAGCATGTAAAGCGAACAGAG 79336 28 100.0 32 ............................ TGAAGGACAACCTGTAGGCGGTTTGTCGCAAT 79276 28 100.0 32 ............................ GTTGAACGTCAAAGTTTCTTCAAACCTACCGT 79216 28 100.0 32 ............................ TTGCAATGTATGCGTTGTCGTTGGATATGCAA 79156 28 100.0 32 ............................ TAAAAAACTCAACAGGTTCTATATCTGCCGAT 79096 28 100.0 32 ............................ TGACTATTTTAATTATTTAGGCTCAAAGCAAC 79036 28 100.0 32 ............................ TACAGCCCACAAAATTAATGTGTCTCTGTCAG 78976 28 100.0 33 ............................ AAAATCAATCAAACTTTCAGGATCATTCGGATC 78915 28 100.0 32 ............................ AGAAAAAAATTGCTGATCAACAATTTGCATTG 78855 28 100.0 32 ............................ ATATAATTCGCCCACTGGATGCATCAAAACAT 78795 28 100.0 32 ............................ AGCGCACTGGGTACGTGGTATGCATGTCATTG 78735 28 100.0 32 ............................ TTAAACTTCTAAAATCTCAATCCCATGCACTG 78675 28 100.0 32 ............................ AGTATGATTTTGAACACCTTGTTCTGATAATT 78615 28 85.7 32 .......G...T.T...C.......... ATAAATTGCAATCGCAATTTCAAGCAGTAAAA 78555 28 85.7 32 .......G...T.T...C.......... ACTCTTGAGCCATTTGGATATTCAATCGTTTG 78495 28 89.3 32 .............T..C.......A... ACTACGAACTGATAAGGGGATAGACATATCAC 78435 28 75.0 0 ...........T.T.AA.CC....A... | ========== ====== ====== ====== ============================ ================================= ================== 26 28 97.5 32 GTTCACTACCGCACAGGTAGCTTAGAAA # Left flank : TCAAAGTGGCTAGAAAGATTAGTTGACTATGTTCACATCACTCAACCACGAGAAGTTCCACAAACAAAAATCACTGGATATGCCCATTATTTTCGAATTAATCCAAAAATGACTTTGGAGGAACGTATTGCTCATCAGGCTCAACGACGAAACGTTTCTTTTGATGAAGCTCAACAACATTTTAAGCAATATAGTGAACAACCTGAAATTGCTCCCTATGTCAGTTTAAAAAGTTTAAGTACTAAACGTGAACAAAATATAGATCGATATTATCGGTTATATATTGGGAAATCTGTTGCTGAAGAAGCAAAAGATGGAAAATTTGGAACATATGGTCTCAGTAGAACAGCAACAGTCCCCGAATTTTAACCCAATATTTTTTCACTCTTTAACAGCTTAATAAAATCAATAAGTTATAACAGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATAACTTTATTTTTTAATCTAAAATTATA # Right flank : TATAAACGCCTCAACATCTTAGCTAAATTTAGGAAAGTACAAACGATATGGAATAATTTTTATAGTAAATAAAACACGACAATTTAAATGATAATTATTTGCATTATTAATTGCATTTGAATATTTGGTAAAATACAATGTGCAACAATTCTTACACAATCCCTCCGTAATTTAAGTTGCGTATTAACATGAATAAACAATTAACACTTCAAGCACTATCTCTCTCCATACTCTCAGCAATGTCAATTTCAACATATGCAAACGAGACTTCAGAAGACTCTTCCAAGCTTAAAACGATCGTCGTTACAGCAAGTAGTCAGGCGGTGGATGTTAAAGAAGCACCAGCCAGTATTAGTGTGATTACCAGTGAAGATATAGAAAAACAACCGGTGGGTAGTCTTGGCGAGTTATTAAGCAAAGTACCTGGGGTTACTGGTGGAATTAGTCCTACCAAAGAAGGCTCTAAAATTAAACTACGCGGTTTACCTGACAATTACACA # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCACAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched CTTCACTACCGCACAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-5.70,-6.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [71.7-85.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 76720-77768 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKPO01000016.1 Acinetobacter bereziniae strain TUM15327 sequence16, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 76720 28 100.0 32 ............................ TAACTCTAAACGACAAGATAAGTCTGATGCAG 76780 28 100.0 32 ............................ AAGTTTGATGCTGAAAATAAAGTGCAACAAAG 76840 28 100.0 32 ............................ ATTTTCTGGAAATTCTGGAAAATCTACGGGGG 76900 28 100.0 32 ............................ ATACCAACAATAAAGCTAATTAACTTCATATT 76960 28 100.0 32 ............................ TGAAACAGACCCTACAGGTTCAACTGAAGTGA 77020 28 100.0 32 ............................ AAGTATAAATATACGAATTGTAAAGCACGACA 77080 28 100.0 32 ............................ AAACGACCCAAATAATAACCCAAACAACTCAA 77140 28 100.0 32 ............................ ATTTTCTATAATCCAACCAACACCCTCGATCA 77200 28 100.0 32 ............................ TGAAAACAGAAGTAATAAATCCGAAATTAAAC 77260 28 100.0 32 ............................ TGCCAAGCGATTCATTGTAGATTCGCTCATGT 77320 28 100.0 32 ............................ TGTAATATCAGTATAAATCTTGCGTTCAGGTG 77380 28 100.0 32 ............................ ATGCATATCTCGCACTTGATGCCCTAACTGCA 77440 28 100.0 32 ............................ AACTAAAACAAGTAATCTACCCATTGCGACCC 77500 28 100.0 32 ............................ TCATTGTCATTGCATGTATGTAGCGTTGTGAC 77560 28 100.0 32 ............................ TCATTGTCATTGCATGTATGTAGCGTTGTGAC 77620 28 92.9 32 A..........T................ AAATCGGGCAAAGCTTCACCAACTAAAGTACG 77680 28 96.4 31 ...........T................ AGTGTGCTTTTGAAACTGTGGCGAAGATCGT 77739 28 78.6 0 A........T.T....T..A.......C | AC [77762] ========== ====== ====== ====== ============================ ================================ ================== 18 28 98.2 32 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : TATATGTAATAAGGGTTTTAAGCGAAATCAGTAGCTTAAAGCCCTTTTTTTATGCGTATAATAATATGTGATAATATCAGCCTACTAGGTTTAAATGGTGAAATTAGCCGATCTAGCCGAATAATTTACGTCAAGATTACGTCAAGCTTTTGAGTTTAAGATAATGAAAATACCAAAACCAAGAAAACGTGGTGAAGTTTGTTTTACTAAGAAAATAATGAAATGTAAGATTTCTTTATTCTCTAATGATAAAGTAAATGAATGACATTAAAAATATGTGTGAATATTGGAAAATCTTTTACTGATAAGATAAAAGTAGTTGATTTTGAATATAGGCTTAGTTAATCAAACAAATATTCTAAAAATTTCCCCCAATATTTTTTAGTTCTTTAACAATTTAATAAAATCATTTAGTTACAATAGTAGTAAAAACTTGGGTCATTTGATGGTTTCTAGGTTTAACTTACTGTTATTATTTTATTTTTTGTTTTGAAACTATC # Right flank : CTTAAAATTAATTGGATATAGGTTTAGTGTGACTGTAAAAGTCTAATCAATTGAAAAATTTCGATATTATATTTAAAACAAAATTTGACAAAATGAGCGACATAATCTTTGACATTATTACAATTAAAATTTGACTAAATTTATGATTTATAATAATAATGTTTTGACATTTTATTTGACAAAAAATTGACAAAATGCCTGATCAAAGTAAAGTTTGGCTAGATGACACAACTTTAAGAGTCATGACGTACAAGTCCGGCTCTTTTACCTTTCAGCTTGGGTTTGACTTAGAGCAGGTTACACCTATGCTTGATCGTGTAAACGATGCACAGAATAGATTTAATAAAATGCCAAGTTTGCCTCAAATTATAGATCAAGTACAAGAAAAGGTTTTAGCGAGTAGTATTTATAGTACAAATACCATTGAAGGTGGGCAATTTACAGAGCAAGAGACGAAGGAAATTTTAAGATTAGATCCTAAGACAATACAAAAGACCGAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 79410-81716 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKPO01000016.1 Acinetobacter bereziniae strain TUM15327 sequence16, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 79410 28 100.0 32 ............................ AAAACATATAATTATAGATAAATTCGACACAA 79470 28 100.0 32 ............................ AATTTTAGATTTTGAAAGAACCGAAGTATTGC 79530 28 100.0 32 ............................ ATCATTAACTTGAAACATATCATCATTTAACC 79590 28 100.0 32 ............................ AGTTGCCCATTTTTGCAATTCAGGACAAGACA 79650 28 100.0 32 ............................ AGGTTCTGGTAAATCTCTTTTAGCAACAGAAA 79710 28 100.0 32 ............................ AATCGAACAATCAACAACTATGAACGGCATGG 79770 28 100.0 32 ............................ AGTTGTAATCTGTTCTCATGGCGATCATGCAA 79830 28 100.0 32 ............................ AAATCCCATTTAAAGCCATTCCATCGCGGCTG 79890 28 100.0 32 ............................ AGACGTCATCGCCCAACGTATCACCCCATAAT 79950 28 100.0 32 ............................ AATCACAATCATCACGCATAAATTTTTTAAAA 80010 28 100.0 32 ............................ ACGGCTTACTTTGTATGCATCTGGATCGGTTG 80070 28 100.0 32 ............................ AAACAATGTGCCTTGACGCGGATCACCCATGT 80130 28 100.0 32 ............................ AGTTTGTAGAGTCACAAACAAAGTTTGGCGCA 80190 28 100.0 32 ............................ ATTGTATAAAGCTATTAAATCTTCTACATATT 80250 28 100.0 32 ............................ TTTAATGAAACAATACCAACACTAGGAAGTCC 80310 28 100.0 32 ............................ AGTTGGATCTTGAGTCAATAGAAGGTTTTTGC 80370 28 100.0 32 ............................ AGTTCAGAATTAGTATTGTAGGTGTTTAATGA 80430 28 100.0 32 ............................ ATGAATATGTCAGAAGTGTGCTACCGCGCACT 80490 28 100.0 32 ............................ GTTAAGATTAAGCATGATCAATTTAAGGATAG 80550 28 100.0 32 ............................ AAAGACAGAAACAAAATGAGATTTGGACACAA 80610 28 100.0 32 ............................ TGTAACTAAAATTTTCATAAAACCACCTTAAA 80670 28 100.0 32 ............................ ATTAGGTTTTCTTGCACAACCTTTTAGACGTG 80730 28 100.0 32 ............................ TTTAAGATTTCGATTAGTTGTTTTGCGCCTTG 80790 28 100.0 32 ............................ AAACAGCTTTTTCTAAATCCTGAATCTCATTA 80850 28 100.0 32 ............................ ATCCCTCTTGGGCTACAGTTGCAGGGAAAGCC 80910 28 100.0 32 ............................ TTGTTAATTACTTTGTCGGTAATATCCTCTAA 80970 28 100.0 32 ............................ GTCTCTAGTTACATCGGGGAGTCCGAGTTTTG 81030 28 100.0 32 ............................ TTTTAGTGGTTGCTTTTAATTCCGCCCTGAGC 81090 28 100.0 32 ............................ AAGAATCAATTTCAACTTCACCGGTACCATAA 81150 28 100.0 32 ............................ TGCAAAGTTTGATGCAATTGATCAAGGCACAT 81210 28 100.0 32 ............................ TTGATTGAATCTTACCAAAACCAAGGTTATAC 81270 28 100.0 32 ............................ ATTCAATAGTCATTTCAGTAGCCATTTGATCT 81330 28 100.0 32 ............................ TGTGTCGATTGGAATTGGACGCAGTAAAACCG 81390 28 100.0 32 ............................ GTTTCACCAATGTTATAGACAAGAGAAGCAAG 81450 28 100.0 32 ............................ TTGTGGTGCTGATGAAGTTTCAATAACCCCTG 81510 28 100.0 32 ............................ GACAATAAAAACTCGGTGGAAGCATTTCCGCC 81570 28 100.0 32 ............................ CAAACAAAATATTGGTCAAAAGTTTCATGTTC 81630 28 96.4 32 .............G.............. ATGTCAACACATGTACCGCTGGAAGTCCAACA 81690 27 78.6 0 ................A.C.-..T.T.T | ========== ====== ====== ====== ============================ ================================ ================== 39 28 99.4 32 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : GCTTTAAATGATGCCAAATTTAGCAAACGGATCTCAGATAGGCAATTTAATTTAATTCAAACAATTATGTTTGTAACAGGACAGACGAAAAAGTTTTTAAACCAAGCTGAGTTATATCGAATACCACAAATCCAAGTTTTATATACAGGTAAAACAGAACGCACTTTTTATCGTGATATTGCTAGATTGGTTGAGCTAAACTTTTTAGATGATCAAGATGGATTGATTGTTGTTGGTGAGTCAGTTTAAATATGATGAGTTTATAAATTGCTTGGCAATATTTTATAAATTTTTTGCAAATGAAGCAAAAGTAGGAAAATTTGGATTGTATAGATTTTAGTGAAACAGAAGATAATTCTAAAATTTTACCCCAATATTTTTTAACTCTTTAACAACTGAATAAAATCAATAAGTTATAATTGTTAGTAAAAACTTGGGTCATTTGATGATTTTAAGGTTTAACTTACTGTTATTATTTCATTTTTTGTTTTAAAATTATA # Right flank : TGTGCTAAATATAATATTCTTTTCACTTGATTATTTAGGTATTATTTATAAAAGTCGTTAATCGATTTTTATCCCGAAACCCCTTAGAAAACTGTTTTGTTTAATAGGATGATCAAGCTTTTTTATTTATCTCAATTTCAATAAATGAATTAGGCAAGATCTTTTATATTCAAAGTTGATAATAGATAGGTAATTTCCTTATTGCCCCTGAAAAAACTAAATGAATAAATCTCATCTTTTTATTGAATAGGCGTATTTATAGCGCTGAAAATTACTTGGTTTTTAATTTAAAAATAAAATAGTTACGTCGATTTTTTGTAATTTCATAGGAAGTAATGAAAGCATTACTTAAATAGAGCTAAATAGCAAATTTTTGCTTAAATTGGTTTATTCATTTTGCTTGCTTATACATTTTTTGATTTTAAAAAAATTGAATTGAGATGAAATTGATATTTTCTATGATTTTCTAAAGTGAGACAATTTTTTTAATATTTGAATAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [85.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 43212-44500 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKPO01000018.1 Acinetobacter bereziniae strain TUM15327 sequence18, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 43212 28 100.0 32 ............................ AATTTAAACTAATCGTATAATCACCTTTAAAA 43272 28 100.0 32 ............................ GAAGTATTGCACCTCGATACGACTTACTTATT 43332 28 100.0 32 ............................ AGTTCATCTGGTTCATTTCTGTGATTTATTTC 43392 28 100.0 32 ............................ ACAATCACCCGATGATCAGGGAATCTTCGACA 43452 28 100.0 32 ............................ TTTTAAAACTTGGTTGGACACACGAGAAGATT 43512 28 100.0 32 ............................ TAATAGCGTTGATATGAGAAATTGCCACCAAA 43572 28 100.0 32 ............................ TTTCCATTAACATCAACCATGGATACGCCTAG 43632 28 100.0 32 ............................ GATAGTTACATGAGACATTAAAAAAGCCCTAT 43692 28 100.0 32 ............................ ACAAATTGCCACATTTTTTGCCACAGATATTT 43752 28 100.0 32 ............................ CAAATCCCATTTTCTTTTTTTCGCAACTCTAA 43812 28 100.0 32 ............................ TATAAATTTAGGCAATCAAGAGGTTTTGTTGG 43872 28 100.0 32 ............................ AGTTTACCGTAGGTTGGTCATCCGGGATAAGT 43932 28 100.0 32 ............................ TCACTCGGGGGGTTCACATACTTGGACCTTGG 43992 28 100.0 32 ............................ GGAAAGACCGCGGGGGTTAGCCCCGAGTATCC 44052 28 100.0 32 ............................ CGTCATAATTCCCGAACCGTGGGGTTTTACGC 44112 28 100.0 32 ............................ AAAACCGAACGATTTATCCTCTATAATCATCC 44172 28 100.0 32 ............................ AAAAGTTAAATATTTAAAAGACTTATGTTCAG 44232 28 100.0 32 ............................ AATTTCCCGAAGATGGCAACACAAAAGTTGAT 44292 28 100.0 33 ............................ GCTAAAAGTACGGCTATTGACAACATTAGGGTT 44353 28 100.0 32 ............................ TGGAGCATGAGCCGAGAGAAATTGACACAGAA 44413 28 100.0 32 ............................ TATAGTATATAAAAAATTCTATTACCCCAAAT 44473 28 89.3 0 ............G..A.....C...... | ========== ====== ====== ====== ============================ ================================= ================== 22 28 99.5 32 GTTCACTACCGCATAGGTAGCTTAGAAA # Left flank : TCCAGAAACAGACTTGGAATCATACATAATTCAAAATTTTATTCTTATAAAAACAATAAGCACTATTTTTGATGAAATTTACGTTATAGCACTAGTTTTTATTGAACTTTAACATCATATAAAAATGATCTTTTTTAGCAGTTTATTGAGCTGCAAAGGAAGTATGTATTATCGTTTGCAAGATAAATTAAATTTTAAATATTTAATTGATAAATAAATTATTTTATATGAGGTATGTCGTATGATTCTGAGGAGTGAATCTATTAGAGTTTGTATTATATACTGCTATAACTTGTTGCTGATGAGGCAAAAGTGAACAATTTAGGGAAATATGCTTTTAATAGAATTACGATTGTTCAAATATTTTAACCCAATATTTTTTTACTCTTTAACAACTGAATAAAATCAATAAGTTATATTGGTAAGTAAAAACTTGGGTCATTTGATGATTTTTAGGTTTAACTTACTGTTATCACTTTATTTTTTGATCTAAAATTATA # Right flank : AAATTGTTAAACCTCTCTGATGATTTTAAAAATTTATAGTGGTATAAATTGTTTATTTTATAGCAATAAAAAAGCCCACTTGAATGAAGTGGGCTTTTAGAATTTGGCTCTCCAACCTGGGCTCGAACCAGGGACCTGCGGATTAACAGTCCGTCGCTCTACCGACTGAGCTATTGGAGAATCTGCATGCGATTATAAGGATATATCACGAGTGGTCAAGCCTTTGATGTCATCTTTTCTTCATTTTTGACTTGTATGTTTTTTATTTAAACAAATAAGATCAAAATTAAAAAAATGGATTTGAGTGGTTGCAAAGCGAGAGCTGACTTGTTAGATTAAAAACATAAAGAGCGTTTAAGTTTGACTTAAACCGTGTGGATTTAACCAACTTGCCAGCACTAAAATGGCTAAATAGGAGACAGCGCGATGACGACGCTAACTATTTCTCAAATTTTTGAAAAATTTTCTTTTTATCAAGAAAAGTACCTTTCTATCCTGCA # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTACCGCATAGGTAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCACTACCGCATAGGTAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-6.00,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [81.7-81.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //