Array 1 4799-6521 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADNFB010000039.1 Coprococcus comes strain D41t1_190614_C3 NODE_39_length_24016_cov_19.9101, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 4799 30 96.7 35 ...............G.............. AAAGTATTTCCTGTCGAAAGAGCAGACGGAGAGAA 4864 30 96.7 35 ...............G.............. CCCGGAGATCAAATGTCTATATCCGGGGTAGAAAA 4929 30 96.7 35 ...............G.............. TTTGTGGCATATAATTCATAGAGCTTTTTGAGCTT 4994 30 96.7 36 ...............G.............. CTATGTACCGTTTCTGGCTTCTGTCTACTTCCTTAA 5060 30 100.0 36 .............................. TCAATGGTCTTAACACCTTTTAGAATCAATGCTGCA 5126 30 96.7 36 ...............G.............. GATTTCATCTCGAACGAAAATGTAGTCCGCATCATT 5192 30 100.0 35 .............................. TACAGTTCGGTGAGGATAATAAATGCCGGATATGG 5257 30 100.0 34 .............................. ATTCCGAGTGCTTCGAGGTCGGAATCTTTTCTGG 5321 30 100.0 33 .............................. ATCAGTGGTGAATCTATTCAAGGTGCGTCTCCG 5384 30 100.0 36 .............................. GCTTGACGGAAGTGTAGCGGCCGGGAAGAAAATGAA 5450 30 100.0 34 .............................. GTAATCAGTTACATATCTATCAAGATGGGATTTA 5514 30 100.0 35 .............................. GCAGAGAAGTGTTGAGAATTACAGCTGGCTTTAAA 5579 30 100.0 34 .............................. ATAGATCAGTTCTTTTTGTATAAAACGAATGTAT 5643 30 100.0 36 .............................. TTCAAAAATGGAGGTTCATGGACGCTTTTTGCGACA 5709 30 100.0 35 .............................. TCAAACACAAGACAGTCGCCATGCAGTCCTCGACC 5774 30 100.0 34 .............................. CCTCCTACTGATCGCGTTTTCTATGTTGCATTAC 5838 30 100.0 34 .............................. AATTCTGTTTGTCCGACATTCCGCAGTGGAAATT 5902 30 96.7 35 ...........G.................. TTTAAAAACTCCACAATGCCAGATATCGCAAGGTA 5967 30 100.0 36 .............................. ACAAACTGCAGTCGCTGGAAAGGGTCGACGGTACAT 6033 30 100.0 36 .............................. ACTTCTTTGCACATCCTAACCAGTTTCCCACGTTCC 6099 30 96.7 36 .............................C ATAAGAGATGCATATACACCAGAAAGTGATATTTAT 6165 30 100.0 36 .............................. GCTGGATTTTAAGGAGAAAACAAGAAAGCAGCATCT 6231 30 100.0 36 .............................. ACTGTTAAATCCTTAAATCTGAAATCTGCCATGATT 6297 30 96.7 35 .............G................ TGCGGCGTACATCGCCGGCAGCCGACAGCCCGCAG 6362 30 100.0 36 .............................. GACAAAAATTTGGAAATTCGCAACCAATCCAACATC 6428 30 100.0 34 .............................. TATTTAACAGTAGATATTGTTATCGTCATTTGCT 6492 30 96.7 0 ...............G.............. | ========== ====== ====== ====== ============================== ==================================== ================== 27 30 98.9 35 GATAAACAATAACATAAGATGTTTTGAAAT # Left flank : TTGAAAGAAGGGATGTAATGAAAAAGAAGAAAGAATTGAATTATAATTATGCATTTTTGTTTTATGATGTGAATGAAAAACGAGTTCAGAAAGTATTTAAGATCTGTAAAAAGTATCTTTCACATTTTCAAAAGTCTGTATTTAGAGGAGAGATGACGCCATCAAAGTTTATACAATTGCGGAAGGATTTGAACCAGGTAATAGACAAGGATGAAGATTTTATTTGCATTATCAAGTTGATGAATGACAATGTGTTTGGAGAAGAAGTTTTGGGAAATGGAGGGGAGGTAACAGGAGAAAGTTTAATGATATAATTATAGGATTTTTACCAGGCGGAAAAAGAATGAAAAATCCAGGAAAGCTTGAAAAATTAAGAGATTTATGGGATGATAAGTAGGGCGGTTCAGGATAAGGGTGTTGGCTGGTAAAAAATGGAGAAATATAGAAAATATAAGGGGAAAAAGGGGAGGGGAGAAACTAAAAAACGCGGAAATGCGAGG # Right flank : TAAAAAAATTGCACTTGCAGGTTTGAAGAGAAAAGAGATCAATAATAACCTTTTGTGGAGCAATACACAGTTTACATTTTAGAATCTGTGGAAAATATAACGAAGAAAAATGGAGAATAGATGAAAAAAGTAAGATGGATTATTTTCGGAATGTTAGTAGCTTTGCTTGCAGGATGTTCTGGAAAGAAAACAACAGAAACTTCTGCGGATGCAAAAAATGCGGAAAGTACAGATGAGAAAAATACGCTTGATTTTGTAGATGCACACGGAGAGCGTTATACGGTGGAAATCAATGAAGCAGTTGCGAAGAATCCGTATGATAAAGCACTTTTTGTAAAAAATGAAAATAAGATCAGCTATGAGGATAAGAAATATACTTCAAGGCTTGGCGTAGACGTATCTGTTTTCCAGGGAGATATTGACTGGGAGCAGGTGAAAGCAGCAGGCTATGAGTTCGCAATTTTGCGGATCGGATATCGTGGCTATGGTGAAGAAGGTAC # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GATAAACAATAACATAAGATGTTTTGAAAT # Alternate repeat : GATAAACAATAACATGAGATGTTTTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:80.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.40,-0.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //