Array 1 26769-25879 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CAJETE010000019.1 Staphylococcus pseudintermedius isolate 18S03472-1, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     26768	    36	 100.0	    30	....................................	GACGTAGTAAAGACTCAAATGGTTCTGCTT	
     26702	    36	 100.0	    30	....................................	ATTATCGATAGGATTTACTGCTTCTTCTGT	
     26636	    36	 100.0	    29	....................................	GATAACTTGTTAAAGACAGTGCTTGACGC 	
     26571	    36	 100.0	    29	....................................	AAAGACATCAAGAATGGTGCTGACATCAA 	
     26506	    36	 100.0	    30	....................................	AGGTCTTTATGGTCTTCCGTTAAAAACACA	
     26440	    36	 100.0	    30	....................................	CTCGTTGACTGATGGTGTTACATCTTGGCT	
     26374	    36	 100.0	    29	....................................	TTTAAAGCGGACTTTTGAACAGCCTATTA 	
     26309	    36	  97.2	    29	............................A.......	CTACTTGTTCTGTTAAAGGAGGAGACCTT 	
     26244	    36	  97.2	    30	............................A.......	CTCTTGGGTTAGATAATCAATTGTTAATTG	
     26178	    36	  97.2	    30	............................A.......	GTAAGAGACAAAAAAGAAAAACGTATGACA	
     26112	    36	  97.2	    29	............................A.......	CCGATGTTTGAAGAGCCTATGAGCGATTA 	
     26047	    36	  97.2	    30	............................A.......	CAAGTACGGTGTTGAAAATAAGTTGTTTAG	
     25981	    36	  97.2	    30	............................A.......	GTTATGATGTTTGGCGATATGGGTCGTCGT	
     25915	    35	  86.1	     0	.........T................-.CA.C....	|                             	CT [25882]
==========	======	======	======	====================================	==============================	==================
        14	    36	  97.8	    30	GTTTTAGCACTATGTTTATTTAGAAAGAGGTAAAAC	                              	       

# Left flank :   TTTTAATTATATTATTTCCGGAATCACATCTTGGCATACACGATATTAAAAAGTTTATACACCTTATAAAGAGATATAAATTTACCACGATTATTTTCACTAATCATCCTTCTATCATTATTAACGAGGAAAACATATTTCTTTGTAAAAGTAATAAGAAGTGCCACGACATCGAAAAAATATATGAAGAATTAATGTTATTTGTTCCTGAAGAAGTAGTGAGTCATCAATTAGTTAACATGATTGCATATCACGAATTCGTTGGTGAAAACCTTTCCGAGTATGAGCGATATTTTAAGTTTATCAATCATTACAATTAGGCTATACTATATTTAACATTATATGATAGAGAAAAGTTGATCCAACGATGAAGTAATGACTATGTGACTTCATTCGTGATGAAGAGGGTTAACTTTATCATCGAGTATCATATCTGACTTCTTTTAATAGTGCTAAGCCTCAATTTTGAGAAGGATTGAGTCAATGTTTTTGGTTTTGAG
# Right flank :  CTTCTTTATAATCGTACATCAACCTCACTATGTCTTCAAAATAATTAAGAGGCATTGTGGGCTTTTTGTGTTTATACGAAATGTTGTACGAATCTCTCAATTGTGCCACCATGTTATAATAGGTATAAATTGTTCATAAAATAAATAGAAAGCAGGGGAAATCTATGGAAGCAATTATTGCAACTCAACCGTTCCAATTAGCAGAAGGTCAAAAGTTTGAAAAAGTATCGCGTGAGCTCCCAACACCAGAGGCACATGATATTTTAATCAAAGTGTACGCAACAGGGATCAATCCGGTTGATACGAAAATGCGGCAAGCCCCGTTAAATGCTGAGGCACGTGTCCTAGGTTTTGATGCGGCAGGTGTGGTTGAAGCGGTCGGCGATGCGGTTACGGATTTCAAACCGGGTGACCGAGTATATTATTCAGGATCGAATCAACGAGATGGCTCAAATCAGACGTATCAGCTCGTGAATGAAAATTATTTAGCGCATATGCCG

# Questionable array : NO	 Score: 6.00
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.85,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGCACTATGTTTATTTAGAAAGAGGTAAAAC
# Alternate repeat :   GTTTTAGCACTATGTTTATTTAGAAAGAAGTAAAAC

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:72.22%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGCACTATGTTTATTTAGAAAGAGGTAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [0.00,-0.20] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [7-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [66.7-66.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,4.91   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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