Array 1 39361-37889 **** Predicted by CRISPRDetect 2.4 *** >NZ_NHPP01000003.1 Siphonobacter sp. BAB-5404 NODE_3_length_385375_cov_52.7957_ID_5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 39360 30 100.0 35 .............................. TATAAAAGTGTCCCCTCGCAATACTTCCAGGTCTT 39295 30 100.0 35 .............................. AAAAAATTTGGAACTCCCACCAGAAAGCGGTCGAA 39230 30 100.0 36 .............................. GCAAGTCTTCGAAGTCGGAATCTGTCAACACCGGCG 39164 30 100.0 36 .............................. AAAGTTTAAGTTCCCTTACTATCAGCGGTGGATCAA 39098 30 100.0 36 .............................. TTGTTAACCGGGCTTCGGTGATGTGGAGCAATACCA 39032 30 100.0 35 .............................. TGAAGAGCCAAATTCCCAGTTCCCATGTTCATCTA 38967 30 100.0 37 .............................. GAGCAAAGTCCTGGGGGAATGCTTCAAACGCCATTCA 38900 30 100.0 36 .............................. ATCGGAATATTGCTCTTCCTACACCTGCGGCGGGAG 38834 30 100.0 36 .............................. TGAGTGAAGAAGGCAAAAGAATTAATGTAATCAGGG 38768 30 100.0 35 .............................. CCGAGTCGCACGATTCGGCTAAAAGCATGGAAGCC 38703 30 100.0 35 .............................. AGGCTTCGGGCGATGGACCAGCAAGAGCATATCAT 38638 30 100.0 35 .............................. TCGCCCACTCGACACTTTTTGGCTTATGTGTAGCT 38573 30 100.0 35 .............................. TTTTGAAATCCTGAGACCGGGTATTCCTGCGGGGG 38508 30 100.0 35 .............................. GGATTTTGCAAGAAGATGGGAAGCCATCAATAAAC 38443 30 100.0 36 .............................. GCTGGAGAAAGTGCAGATGCTTTTCAAGCGTGGAAA 38377 30 100.0 36 .............................. ACAGGTAGCTTGCCGGTACTTACTAAGTTATCCCAG 38311 30 100.0 36 .............................. GTTGCTCCGTTTCGAACGATGATAGAAGCCATTTTG 38245 30 100.0 35 .............................. CCGTATAAAACCCTTACAGCCTCTCTGTTTAGGGG 38180 30 100.0 35 .............................. TTTTGCCAAAATCAACGATATGAACCACTTCAGTA 38115 30 100.0 35 .............................. ATCATGCCGCCGTTGACTCGCTTCTGAATCGTGAG 38050 30 100.0 36 .............................. ATTAGAGTTTAGAAAGAAGGTTCACGAGCGAAAAGC 37984 30 96.7 36 ............................T. TTTTGGCTTGGAATACGACGGAATCGAATAGTTCAA 37918 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 23 30 99.9 36 GTCTTAATCGTACCTTATTGGAATTGAAAT # Left flank : TGCATTCTCGTACGCAATCCCCTAATGGCAGGGCTTCTCTAGGGATTGGAGCTAAGTTCCCAGTTCTTGATACCTTGAATTTTGAAAAGGAAGAATTAAAAGATTACCTTTCCACGTGACGTGTTCTTGCGGTGTACGCCACGCCCTTACGAGAGTCGTTGCTATTTTTCGTGAGTTGAAACTTCGAGTAAATGAAGTAAGATTCGTAAATGAGAGATTGAATGGCAGGATACTTTCTTCGTCTAAGGGTGCCGAAGAAAGAGAAGAGGTTATCTCTGAATTCCACGCCCAATATCGTCGACCTCCTACAATCGTTCTTTGGCATACTGTTATTTTCAGACTAATTGAATCATAATAGCTATAACCATCTGATTATGAACAGTCGTCGATCGACGGGGTTTTTCGTACCATTGGCGGTCGACGACTATGAATTTGGATATACAGAACTAAAAAGGGCCCTAGAACCTAAAAAGGGCTATTTTTTCTCGCTAAATTCACGG # Right flank : AAGGTTAATCGCTTGAAATCAATCGGTCTTTTAAGTCTTTCACCGGAATCAAAACTCCTCAGACCGATCCGTAGCAACCCAGCGTATATACGGAAAAGTCCTCTTTAGAGAGAGGACTAATACTGCTTTTAAGTGATTCAAGAAGCGGGCTTTAAAGGCTAGGGTTACGCCTCTTTACGCATCTGATTTTTTTGTTGGGAAAGTATGCCTTCCTCGATAGCCCTGAACATAGAATCCACATCCTCTTTTGCGAACACCTCAAGGACGCCACTTGCTAACATCTGAGTGACTTTAGAGGACTCGTGACAAGTTGTCCAGCCAAATAAAAGAAGCTTAGGAAATCGATGCGTGAGCCGCTGGGCTGTTTCAATCCCATTCAATTCAGGCATCTGTAGATCCAAAATACAAACATCGGGAATTTCATTAGCCTGTTCCAGCTTTTCAATCAGTTCGAGCCCGTCGAAAGCAAAAATGTCTAATCGAAAACGTGGATCTTTTCT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTTAATCGTACCTTATTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 1 90885-89348 **** Predicted by CRISPRDetect 2.4 *** >NZ_NHPP01000014.1 Siphonobacter sp. BAB-5404 NODE_14_length_126095_cov_54.8429_ID_27, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 90884 30 100.0 36 .............................. AATAGTATGTTTTCCTAGTGAGGTGACACATGAAAA 90818 30 100.0 35 .............................. GTTTATTCATTTGAATTTTTCAGGAAAAAGAACGC 90753 30 100.0 36 .............................. GGAATTCAATCAGGAAGTACTTTCTGAAGTCCAAAA 90687 30 100.0 36 .............................. AAGTTTCTGATCTGACGATAAACGATGCCGGTTCGT 90621 30 100.0 36 .............................. TCAACTCATTCAATCATTCAACTCAAGTTAACTTTT 90555 30 100.0 35 .............................. TCGCCGGAATGGCTACCCAGGCCGTGCAGTTTTTA 90490 30 100.0 34 .............................. ATGCCGCCCAGCCAAATGACCGGCTTTGCTTTTT 90426 30 100.0 35 .............................. CCGTGTCCCCCAGGTGAGTGGCTGACTCTTGGTTA 90361 30 100.0 37 .............................. TGAGCCTCTAAAACAGCAGCGAATAATTCGTACATGG 90294 30 100.0 36 .............................. AGATAGGCGAGGCACTAGGAATACCTACGGACGCAA 90228 30 100.0 36 .............................. GCATTATACGTAACAGGTACTTTAGCGGGGAGTGTT 90162 30 100.0 34 .............................. TGGATATGCTGCGTGAACTAACGTATGTACAATC 90098 30 100.0 36 .............................. TTAGAGAGCTTACATTCTCAGTGTTATCAACGATTT 90032 30 100.0 35 .............................. ATCCTAATCTTGGCGTCAGCGTGAAAGCGGCCTAT 89967 30 100.0 36 .............................. ACGGCAACTTACTTGCTTTGGGCACGAATGGTGCAG 89901 30 100.0 35 .............................. ATAACTTTTCAGAGAACATCAAGGCCCTGATCGGC 89836 30 100.0 35 .............................. AACATCCCTCTGAGAGCAGATTACGCTGGTGTTCG 89771 30 100.0 37 .............................. GCAAAAAGGGGTTTGGCTAACTGATGCTCTTGTTATG 89704 30 100.0 35 .............................. GAGGATGATGCAAGGGTGTCGAAAATTCGGATTAT 89639 30 100.0 35 .............................. GAAATCGCTTGAAGTAGGCTACCTGCCTAGTTCCG 89574 30 100.0 36 .............................. CTATCCACATACGGTTCCGGTTGGGCTGGTTTATAA 89508 30 100.0 35 .............................. TAATGAAAACGTAGATGCGGGCCAACACTGCCCCA 89443 30 100.0 35 .............................. AAGCAGAGCGGGTGGGTTCTGGCTTTAAGAACGGA 89378 30 76.7 0 T..A....A.C....G.CA........... | G [89357] ========== ====== ====== ====== ============================== ===================================== ================== 24 30 99.0 36 GTTGTAATCGTACCTAGTTGGAATTGAAAT # Left flank : CCCTACATTACCCTTTCGCTGGGAGATGGTAGTCCTTTATTGGCCGGACTGGATAAAAAGCCTAATCCCATTAGTTATACGAAGGTCATTCAGCCTGCTTTTGCCCATACTACCTCCGCTCAGACGTTGATGGTAGGCGATACGACGATGGACATTCAATACGCTCATAACTGCGAAATTGATTCCTGCTGGGCTGCTTACGGATTTGGTTCTGCCGAGGCCATTCGCCCGCTAAAACCCACGTACGAAGTGAACGCATTGAGTGAACTGGAGAAGATTATTGAGTAATTCAAAAGCGTCGATCGGTTCATTACCAGCGTCAAGTAATGACTAAAACAGTCCAAATGGTCTTCTAAATGCTGATTTCCAGCCTTAAAGACAGTCGTCGATCGCCCAGCAAAATCTTATCATTACAGATCGACGATTTTTAAAGCTTATTTCTGAGAGAATACCCTCTTTTACTTAGCTTGGAAGGCCGTTTTTTGAGTAGCTTACGATGG # Right flank : AATAACCAAGTCAAAGCCCCTAGTTTTTACTACGCCCCATCTCTACTTTACCCCTGCCCTAATTAACCTCATTTTTCTTCACCTCGAACGTATACGTCTGGCTACCGCTTAGGCCAGACTGGCTGATGCCCTGTACGACCACGCGGTAATGCCCCGACAGATCGGAAGTGAAGAACTGTAACTTTTGCTGGCCGTGGGCCTGCGGTTCCCAGAAGAGTAAGGAACGAAAATCGGCGATGCGGCTCTCGCGTTGGGCGGGCGTGTCGTAACGGGGTGAGTAAAAATCTCTTCCGGCCTGAACCCCTTCGTACGAAGTGACCAGTCCTTCGGGCTGATAGCCAGCAATATCGCCTTTGTAGCTCATGAAACTAACGATTCCACTAAATACCGCAGAACCTAATACATACCGCTTGTTGACAATGTCCAGCCGCTTGATTTTCAATGGGTCGATAGCCAATAACTTGTTCAGGTCGAACATGGGTACGCCATCGAGCAGTACC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAATCGTACCTAGTTGGAATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.80] Score: 0/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA //