Array 1 941422-941694 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP047652.1 Bombella sp. KACC 21507 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 941422 29 96.6 32 ............................G GGTAACGATCAGGAGCGCGGGAGTTTGTAGAG 941483 29 100.0 32 ............................. TTCTGTGCCAATAGTGATGCGTTGTATTGAGC 941544 29 96.6 32 ............................A CTGACACTAGACGCAACGGAAGACGCGCTCTG 941605 29 100.0 32 ............................. TTAATCCGTTTTTCTCCCGGTAATCCTCAAAA 941666 29 89.7 0 .......T.....A..............A | ========== ====== ====== ====== ============================= ================================ ================== 5 29 96.6 32 GTGTTCCCCGCGCGTGCGGGGATGAACCT # Left flank : CTTCTTGGCGTTATTTTACATCAAGCTTTGTTAGTGCATGAAACATGGGGAACAATGCCTTTTCTCTTGCTTGATGAACCTTTGGTGCATTTGGATAAAAGCAAAAGAGGCGCTTTGCTCACCACGCTCACTCACCTAAAAAGCAACGTCTTTTTAACCGGCACTGAATATGAAAATTTTGAGCCAATAAAATCACAAGCCGCATTTTACACCGTTAAAAATGGTTTTATTCAGTCTCGATAAGATATTTATCGCTGCTCTAACCCCCTTAAAAATTAAAGGGAAAATTAGCTTTTTCACCCCCTTAGCCTTTGCAAAATTCAGACTCATCTTACGAACTTAATTTTTTAAAACTCACTTCGTTAAGAAGAAATTTCAACTTTCTTTATAGCTGATAACAGCCTTAATCCTGCAAAATATCTGCCTTAAAAACAGGCAAAATAATCGGTAACTTTCTTGACAAGGAATTTCCCTTTATATAACAATAATTTCCAGCAAGA # Right flank : AAACTCATTGCTGGTTACGCGTCCACAACTGGCATGTTTTTCGCTTATGCGATGATGAATCTTTTTCACTGGAAAATGGGTTAAATCCCTCATCATGTTCTAAATTACCATTTTTATTTTGCTATACATAAACAAGTTTCATAGTTTGAACAAACAGACCACGAGCAGAGTGGCCTAAAGAAGCTGCTATAATTTATGTCTGACAAAATATTTTTTAAATCTCGCAAAAAACAAAGGTAAATAGCTATTTTTATGGCCATAATTTAATGGCCTTATGTGTAATGAAAAGCACAAAGCACAAAGCACAAAGCACAAAGCACAAAGCACAAAGCACAAAGCACAAAGCACAAAGCACAAAGCACAAGAATAAAATGCTTAAAACTAATTAAAAGCAACAAATTACTGAAAAGCAGCTACAAAAAAGCTTCTGAAAAACAACTCTAAATCACATTTTTTTGCACTAAAAGAATCAGCCAAAACTAAACTGTTGCCCGCACATT # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCGTGCGGGGATGAACCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTGTGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1691481-1691874 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP047652.1 Bombella sp. KACC 21507 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 1691481 29 100.0 32 ............................. GAGCCTGTACATTGTGGCGGTCGATTTTGATA 1691542 29 96.6 32 ............................G ATCGTTATCATCCTAAAACCTTGTTTTTCTAG 1691603 28 96.6 32 ........-.................... ATGCCATCGGCAGCTATGCCTGTTTTGTGAGA 1691663 29 93.1 32 ....G.......................A TTTTCTGTTTTTTCGACAGTTTCCCGCGCCGG 1691724 29 100.0 32 ............................. TTATTTCTAGCGTTGCTAGCACCCTATTTATG 1691785 29 89.7 32 ...........A.AC.............. GTCCTGTTCTGTTTTAATCTGGGCGTGAGATG 1691846 29 79.3 0 ..A.......A..AG..AT.......... | ========== ====== ====== ====== ============================= ================================ ================== 7 29 93.6 32 GTGTTCCCCGCGCGTGCGGGGATGAACCT # Left flank : TCATAGCTCATAGCTCATAGCTCATAGCTCATAGCTCATAGCTCATAGCTCATAGCTCATAGCTCATAGCTCATAGCTCATAGCTCATAATTCTGACGCAGAACCAACTCTCGTCAAGACAGTTAAGGCCAAATTTTTGATAAACTTGCCTCAATATGCACGAATCCACAGCCAGTTGACCACCTGATCAATAGACTTAGCGAGCCATAACCATTTAACGAACAACGTTATGTCCCACATAATGTATAATATTGCTGCCCAATCCAACTTAAACTCTAACACATGCTTTTTTGAATGACCGGCAAATATTATTGGGAACGGGGCTATTTTCTACCATTGAACACCATAGAGACCATCTCTTAACTGACATATCATATGTAATAATTCCTTACATAACCCCTCCCATATCTTGGCGATTTCTTACCTCAAAACACCCTCTAAAAGTTGGTAGATTTCTTGACAGGGAAATTCCCTTTATATAACAATAACTTCCAGCAAGA # Right flank : TAAATACCATGCTAGCCCGGTAGCCTCAGTGCTGTGTTATTCGCGTGCATGTTTATGAAGCGTTGACAATCCACCGACCAAAATCACTAGCCAACTATTCTTTGTTTGTGCGGGAATAGGCCAAAAGAAGACATCCCTAAATTTTTAACGCAAAAATGTTCTCGACATCTGCAAGGGTGAATCGTGGGTGTTATCAACTTCAAGTTGTTTTATGTGATATATTTCGCGCATATGAGGAGGAGGATGAATCTCAGGATTATATCTAAAACTAAATATACCCCCTTCATTGGTCTTATTACACTCTATATGCCCTGATCTGATGGATTAGCCTTAAGTAGGTCGACAAAATCTCGCTACTAAGAGACACCGGAAATTGCCTAAAATTTAATCACAAAACTTGGTAGATTTCTTGACAAGGAAATTCCCTTTATATAACAATAACTTCCAGCAAGGGTGTTCCCCGCGCGTGCGGGGATGAACCTACGACCCTACAACTCATG # Questionable array : NO Score: 5.50 # Score Detail : 1:0, 2:3, 3:0, 4:0.68, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.56, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCGTGCGGGGATGAACCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTGTGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 3 1718902-1719114 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP047652.1 Bombella sp. KACC 21507 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1718902 29 100.0 33 ............................. GGACGCCTTCACAGCCGATAAATGGGCGCGTGA 1718964 29 100.0 32 ............................. CCGCTAGAATCAGACAGCTTATAGGCACGCTC 1719025 29 96.6 32 ............................G GCCTCTTGCAGCTCATGCCAGGCACTGCACGC 1719086 29 89.7 0 ...........G..T.............A | ========== ====== ====== ====== ============================= ================================= ================== 4 29 96.6 33 CTGTTCCCCGCACGCGCGGGGATGAACCT # Left flank : TCATGCACGCAGGACGATAGTCACAGTCATTAGTCGCAGCTCATGCGTCCAAGACACGAATTACAGGCTATAATCGCAGTTCATGCACGCAAGACGATAGTCACAGTCATTAGTTGCATCTCATGCATCCAAGACACGAGTTACAGTCTATAATCGCAATTCATGCACGCAAGACGATAGTCACAGACCATAAGTTAGCGTTCCTCGCCTGCACTAAGAAGAATCGCAGATGCTCTCAACTTATAGTTTTTTATATGAGGTTTTTCGCACACACAGAAATGAAGATAAGCCCCAGAGATATATCCAAAACTGGCTATACCCCCCCCTGCTCTCACCGACCTCGTTACACCTTATATGCCTTATTCTGGTAAATTCCCCTCGGACAAATCAACAAAATCTCGCTACCAAACGGCATCAAAACTGCCTAAAATTTAGTCACAAAATTTGGTAGATTTCTTGACAGGTAAATTCCCTTTATATAACAATAACTTCCAACAAGC # Right flank : AAACATATATCAAAGTAAAAGGGGTATGGGCGTATCTGTATCGGGCGGTTGATAAAAACGGCGATATGATTGGCTTTTACCTCTCACCGACCCTTAAGGCCGGGGCTGCCAAACGTTTTGGCTAAGGCGGTAACCGTCCTGAAGGATTGAGAAAAGCCTGTAACATCAATATGGATAAAGCTCCAGCATATGGCATTGCCGTTGCAGAGCTCAGGAAAGACGGAAAGCTGCCAGGCACGGCGAAGCACCGTCAGGTGAAGTATTTGAATAAGTTGAGGCTAATCACGGTAAGCTAAAACACCTGATTAAACCTGTTCGTGGTTTCAAAAGTTTGAAAACAGTTTATGCGACGATTAAAAGCCTTGAGGTCATGCACGCCCTAAAAAAGGGACAGGCCAGACTTTTCCAGTTTCAGAACGGGATCAGAAAAGGGGTGCGTTTGGTCAAAGGACAATTCGGAATTTATAGTAGCTAAAACCCTATACATCCTCACCCCTTCG # Questionable array : NO Score: 5.69 # Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGTTCCCCGCACGCGCGGGGATGAACCT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGTTCCCCGCCCGCGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [70.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //