Array 1 28196-27169 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAHZPD010000012.1 Streptococcus parasanguinis strain K103 Sparasanguinis_K103_DanaHsu_Sia_NO_12, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
     28195	    36	 100.0	    29	....................................	ACGTTTGATTTGTTCTGCAAAGTCGTTTT  	
     28130	    36	 100.0	    31	....................................	TTAAATTTACACTTCCAGAAGAAGTGAAATT	
     28063	    36	 100.0	    30	....................................	ATAGGCTTTAATACTGTTCGCAGTCTCACC 	
     27997	    36	 100.0	    30	....................................	AGGTATTCAGATGTCACGCCCAAAGCCTTG 	
     27931	    36	 100.0	    30	....................................	CAAGATGGCTGTTATTGTTTACGATTGATA 	
     27865	    36	 100.0	    31	....................................	GTCTTGTTTGGTGATGTCAAATTTAAACCAG	
     27798	    36	 100.0	    30	....................................	ATCTGCAGAACAGGCTGCAGCCGTATTGAC 	
     27732	    36	 100.0	    30	....................................	TGCACGATCTGCGGTTAAGAAAGCAGCAGA 	
     27666	    36	 100.0	    30	....................................	GATAGAGCTTGATCAAAATGTTAGAGTATA 	
     27600	    36	 100.0	    30	....................................	AAACAAGCCTTCAACGAAGAAGAAGCTATT 	
     27534	    36	 100.0	    30	....................................	GAGCAGTTGTCCAAAACCCACGTTTTATCG 	
     27468	    36	 100.0	    30	....................................	AGATAAAGCAGATCACAGGCACAATCCACA 	
     27402	    36	 100.0	    30	....................................	GATGATGCCCACCAAGCAATGATTGGATTC 	
     27336	    36	 100.0	    30	....................................	ATAAACTTATGGCGTCCGATAACTATCGAG 	
     27270	    36	  97.2	    30	.................................T..	TTATTGATCCTCCTTATTTTCTATTTAGTT 	
     27204	    36	  97.2	     0	...........T........................	|                              	
==========	======	======	======	====================================	===============================	==================
        16	    36	  99.7	    30	GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC	                               	       

# Left flank :   TGGATGATTATTTATCCTATAAGGAATTTGTTGAGTGTTGTGAACAATTAGAATATTTAACTAATCATAGCAATATATTGTACACTATCTCTTTTCCTTCGAATGAAGGTTATCTTCATGTCACGAAAGAGGTACTAGAAGAGATTAATATTGTTTCAGATTACGTTGATCATTTTTATTCATTAGAATTTATGTACGAACGTTTTACTAATCAATATCCAATAAATCAAATACCTAGTAAACAAGAGTTTTTATCATCTTTAAGAAAGATTGGACCTTATTTATTTAGTTCTGACATTCTCCATATGAGCTTATCGATTGAAGATCAAGTAGCATTGAGAATATTAAATAATTTGTACCAGTATGAAATGAAAATAAAATTCCGTATTGAACCAGTTAACTCAATGTTATTGAAGTATTTAGAAGAATAGTATTGACGAGTTAGGTTTAAGACTTTATAATGGTTTTGAGCTACAAAAACCAAAATTGACGAATTTGAG
# Right flank :  CCAGAGTACACAGAGCCTATGTTTTAGAGCTGTGTTGTTTCGAATGGTGCCAAAACTTATTTTTTGTATGATATAACAGAATATTTTAAAAATGAAGGGGTTTTCTATGGAAAGTGATGTGTTTTTTGATTATTATTTAAAATCACTTAGGTTTCATTTGGGTGATAGGTGTAAGGATATTGGATTTATAGAGTTTTTCAAAGATGAAAATAATTGTTTTATTACTATAGAGGATTATGTTTTGGAATCATTTGTAATATTGTCAAATATTTTGAGTCAGAAGAGGATTGTGTTTTCTTGTGGAATTATTTATAGTAAGGGGGTAGTTACTGGAGTAGAAGTATGTATGAATGTATTAGAGTTAGAAAGATTAAATAATTTGTACAAGATATAGTTTTGAAGCATATTAAAAAAATAAGGGAAACTGTCTATGTAGGATGTGTGGAGTTGATAGTATCAATGTTTCCTTGTTTTAGAGCTGTGTTCTTTCGAATGATCCC

# Questionable array : NO	 Score: 6.25
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:69.44%AT]
# 	Reference repeat match prediction:         R [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-1.20,0.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [2-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [58.3-70.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,5.18   Confidence: HIGH] 

# Array family : II-A/C [Matched known repeat from this family],   
//