Array 1 170623-171844 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP019633.1 Sedimentisphaera cyanobacteriorum strain L21-RPul-D3 chromosome, complete genome Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 170623 36 100.0 29 .................................... TAAAGAGAATGCAGTTAAAGCCATGGAGC 170688 36 100.0 30 .................................... GAGGCAGACACGCAGAATATAACAAGGTTA 170754 36 100.0 30 .................................... TTAATCGAAAATCGAAATTTGTCAACCCTT 170820 36 100.0 30 .................................... ATAGAGGGTGTGCTTGACGCTAAGGGCTAC 170886 36 100.0 31 .................................... ATATATTTGAATCGTCCGAATACAGCGTTGT 170953 36 100.0 30 .................................... CAATGGATATGCACGTGATGGCGATTTTAT 171019 36 100.0 30 .................................... TCTCTGAATTGTAGTGCTGCGAAAATGAAC 171085 36 100.0 30 .................................... GTGCGGACGAATATCCTACAATTGCGTCAA 171151 36 100.0 30 .................................... TCCAAAAACTATCTGTAAGATAACCCTTGC 171217 36 100.0 30 .................................... GCTTCGGCACAAAAGAAGAAGCTGAAAAAT 171283 36 100.0 30 .................................... AGCGCAGCTCTTGAACAGTTAACCTTATTT 171349 36 100.0 29 .................................... CTACTTGGTATATAAGCGGGTCAGCCGAA 171414 36 100.0 29 .................................... CTGTATCGTCAAACCAATATACGCTTGTC 171479 36 100.0 30 .................................... CTGCGAAGCGAAGCTGAAGCACACGGTGTC 171545 36 100.0 30 .................................... GCGCCCATTTCGATTCCCTTTGCGAGTCTG 171611 36 100.0 30 .................................... GCGCCCATTTCGATTCCCTTTGCGAGTCTG 171677 36 100.0 30 .................................... GCCGAATCGGAAATTAAAAACGGAGGAAAC 171743 36 100.0 30 .................................... GGCGTGCAGTTTAGAGGCATGCGTTACGGA 171809 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 19 36 100.0 30 GTTGTAACTTGCTTTCATTTTCATATCGCTTACAAT # Left flank : ATATTTCCAGAAAAGCCTGCTTGCCCTTGCTTCAATATTTTCAGGATCACCTGATTTAACTTTAGAGGCAAGCTCAGCAATCCCTATTCCGACTTCAGGATTATAATTTGATATTATTTTTCCCTGATGAGTTATTTTCGCTTTTATAAGCTGTTTCCAGAGGCGTTTTTTCAATGGCTGGGAGGCTTGGGTTTGCTGCTTCTGCCTTTCTGTTTGAACAGAATTTGAATCTATGGGAAGCAGCATACCTGCGGGGTTATGTTCTCCATTGCAAAGAACAACTGCTGCCCGGCAGTTAAGCAGCTCTGTAAAAACGCTGTGAGTATATAAAACGGCCGAATTGTCTATCAGGAGAATTCCTATATCTTCACATGGGATCGATCGTTCAATACCATTTTGGCTTGCGATTACCAATTGGCCATAACGAATGTTCAGTTTGCAGGAATTTTCTGATATTTCAATAATTCGTTTCATTATCTACCCCCCCCCCCCCCCCTAAA # Right flank : TTCGCCGCTTGTAAGCTCCTGATATGAAGGAGTTTACAAGCGGAAATGATTTAAAAAAACACTCAGAGAAACGCTTCTTAGCATTATTTCCATTCTTTTTCATATGAGTTACCTTCTCTCTCTGGTTTTTTTACGGAATAATATTTTCCCATCATATCAACTTCAAATTTTTCTAATTTTGCATTTTTGTAAGAGAATTCTTTAGTGAAACTCTTTCCCTCCTCGTCAAATGAAGATCCATCATATTTTTTTAGCGATATCACAGGCCTCCCCCCCCTTATATAATCTATGTAATACATTTGATCTTGGAATTTAACGAGGTCATCTTTAAATAAGGAAAATTTGAATTCAAACTCATTTGTTAGTTCCGGCCAGTCTTCATACGGCGTATCTCCTTTTGAAAGATATTTCGAAGGAAGAGGGCTTTTTGCTGCAAAATCAGATGCGTAAAGCGGAACAGCATAGTTTTTCCCGTCAGGTCCTTTGTAAAAATCTGCTCT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAACTTGCTTTCATTTTCATATCGCTTACAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 2 2925475-2924612 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP019633.1 Sedimentisphaera cyanobacteriorum strain L21-RPul-D3 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ================================ ================== 2925474 36 100.0 26 .................................... CCGTATTTGCCGATTTTGTAATCAAC 2925412 36 100.0 27 .................................... ATAAACCTACTGCCGAATACAAAGATT 2925349 36 100.0 32 .................................... CCCTTGCCCTCGTCGCTCGGTGCGGCGTCTAA 2925281 36 100.0 27 .................................... TCCAAAAAACGAAGAAGAAATTCAAGC 2925218 36 100.0 29 .................................... TCGCCAAACAGATGTTTACGACCGCTGTC 2925153 36 100.0 27 .................................... TTTCTTGCCTTTCTGTTATGGGATGTG 2925090 36 100.0 26 .................................... GTTACAGGGTCAACGACTATCACCTT 2925028 36 100.0 26 .................................... ATACGCTAAAGAAGTTCACGGGGTAC 2924966 36 100.0 29 .................................... AAAGGTGATTAAGGTTTTCTCACGAAAGT 2924901 36 100.0 29 .................................... ACACCGCTCCAGAATATCAAGTGTTTATT 2924836 36 100.0 27 .................................... ATAAAAAATCAGGAGTATATAATTCTC 2924773 36 100.0 28 .................................... TTGGCCTGAATTGGCTCATTTAGGTGAA 2924709 36 100.0 26 .................................... TGGGCGCACGAGATAACCCTGATGAT 2924647 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ================================ ================== 14 36 100.0 28 GTCTAAAGGCCTTATAAAATTTCTACTGTCGTAGAT # Left flank : GTGCAGAGTTATTACAGGGCATTTATGCGTGATAAGAAGGCAGAAGAATTTCCAACATTTGAACTTTAGGAGGATTAAAATTGCTTATAGTATCCTACGATATATCAAATGACAAGCTGAGAACCAGATTTGCCAAATATCTCTCAAAATTCGGCTTCAGACTTCAATACTCAGTGTTTCAAATTAAAAACAGTAAACGAATCCTTGAAACTGTATGCAGCGAAATTGAGAATGAGTTCGGCAAGAAATTTTCTCAAACCGACAGCGTTATTATTTTCCATCTGAGCAAACAATGCAGAAAATACTGCTATGGATATGCAGTTAATGACGACAAAGATGTTATCGTTGTCGAATGATTTTTCTTCCGAAAGCAGCCTTGCAAACCTCAGTCTTAATTTGTATAATAGTTCTGATATGAGGCTCAGCTTATTAAATACATTTGTCAAATCCTTGATTAAATGCTCTGAGAGCGGTTTTATGAAAAGATTTTTTGAATTAGC # Right flank : TGCCGTCAAATGCGAGGGGGCTTCATGAGTCTCTGTTCTTCTTTCTCGCTGCGTAGAGTCTTTCAGTGAATCCGCCTTCGTATTCAAACGCTTCGGCGAGTGAATTGATTTGTTTCCGGAGAAGGCCGCAGGCAATGTTTATAAGGGTGATAGCGGAATTAGCGCTCAAAAAGGCCAGCTCCCTGTAAGACTCGGAAGACAAGGTGGACTCGGGATTTAATTCACGCTATCCAGCCTGTCCACAGTGTCCAGACCTCTTTTTAACCTTTGCTATCCAAATAGCCGCTTCATCAGCGTTTTTCAGCCGCTTGGCGACAAGCTCCTCACGAAGTGGGTTTGCTCTCTTCCATTCCTCCATCCCCCGCTGCCTGAGAAAATCCTCATAGTCCAGCCGCAGCTGCTCGAGGCTCGCCCTCGCAGGCGTTTGTAAGCGAACTCAAGCGAACGATGGAAGCGAAGATTCGGGAAATGCTGGAGGAAATAAAAAAGCCCCTGAGAGC # Questionable array : NO Score: 3.15 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.10, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAAAGGCCTTATAAAATTTCTACTGTCGTAGAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [46.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.27 Confidence: MEDIUM] # Array family : NA //