Array 1 11877-11265 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_VTKM01000003.1 Listeria monocytogenes strain FSL L7-0148 NODE_3_length_319243_cov_77.696230, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                      	Insertion/Deletion
==========	======	======	======	=============================	=====================================	==================
     11876	    29	 100.0	    34	.............................	TCACTTCTTGATAAAGCTTAATCGATTTTTCCAG   	
     11813	    29	 100.0	    36	.............................	ACGATCTGCCGCACCAAGGACAATATTCGACTGGGA 	
     11748	    29	 100.0	    34	.............................	TTTCGCTTAAAGAAAGATTGTCGTCCATCGTAAA   	
     11685	    29	 100.0	    37	.............................	ACTTTGTAAGTGGTATAAACAATTAACGATAACAAGA	
     11619	    29	  96.6	    35	............A................	TTTGCAGGAATCACTTTACCAGTTGTTGTATCTTT  	
     11555	    29	 100.0	    36	.............................	CCCGGAAAGTCTGGGCTTAATAAAGAAAAGAATCTT 	
     11490	    29	  96.6	    37	..............A..............	ACAGTTGCATACTTAGCAATTCTTTTCATGCTGTCCT	
     11424	    29	  96.6	    36	..............A..............	TGAAATGCTTTGATTGCAACCACATATCCATCCCGG 	
     11359	    29	  93.1	    37	A.............A..............	GAAAAAGCACTTTTCAATACTCGTTCGTTTTCTTTTT	
     11293	    29	  82.8	     0	......A........CA.A....A.....	|                                    	
==========	======	======	======	=============================	=====================================	==================
        10	    29	  96.6	    36	GTTTTAGTTACTTATTGTGAAATGTAAAT	                                     	       

# Left flank :   GCGTCCGTGCCACTACTTCAGCTGACATTTTACTTGAAAAAGGTGCCGTAGAAGTTATCGCTTGCGCAACCCACTCCGTCATGGCTGGAAACGCAACCGAACGCTTACAAAACTCCAATATCAAAGAAGTCATCACATCCGACTCCATCGATCTTCCAGAAGACAAGCAATTCGACAAACTAACAACTATCTCCATCGGACGAATCTTAGGCCGCGCAATCGAAGGCGTACAAGAAAACCGCTCGTTGCATCCGTTGTTTTAAAGAATAAGCAGGAAACAGTAACTTAGTAGAGTTGCTGTTTTTTTGTTATCTGTCGACCTTGAGTAGTGTGAAAAATACCGGAGACCGACAGAAAGTTGTAAGTGGCTAGAGGAAGGGAAGTTTGGCGGTATTTGCTTGGGAAAATCTTCCGGATAAGAGGAGATTTTAGATGTTTTTTGGTAGGTCGACAGAAATAGCTCTTTGAGGTAAGATGGGAGTAAGAAGAAAAGTTAGCGG
# Right flank :  CTCCTCCATACACAACTCCACCACCATCCATCAAACAAAAAAAACGTGACTGCCAAACTCGCAGTCACGCTTTTTTTCAATCATTAAACTCTTTCAAAACATCCTCTTTAATTTCAGTATAATTGGTTACTTCCTCTTTCTCCTCGGAAATGAAATTATATGCTTCCACTTCTCCCAAATTCTCGAAATCGGTAAGAGTAGCGTCTGTTTCTTTCAAGTCTTCATTAAATTTGCCGTAGCCCATGCTGATGATTGAACTTAGTTTTTCGCTGTCATGTCCGCCGCGTAAAAATAATGTGTATTCTTGCTCTTGCTCAAGCGCGATATAGTTTTCAATGGATTCATACGCACCTTCATTTAAATACCAAGGCTCTGAAACGTCAATTTTGTCGCCTTTTTTGAAAGTACCTTTGTAAGTTTCTAAAACTTCGACTTCACTTATAGTGCTGGTATATTCCATTTTTTCTTTATCGTAATCGCCAATTTTCTTATTTTTCACT

# Questionable array : NO	 Score: 6.01
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.83, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.92,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGTTACTTATTGTGAAATGTAAAT
# Alternate repeat :   GTTTTAGTTACTTAATGTGAAATGTAAAT

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:79.31%AT]
# 	Reference repeat match prediction:         R [matched GTTTTAGTTACTTATTGTGAAATGTAAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [0.00,-1.20] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [7-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [55.0-56.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.28   Confidence: HIGH] 

# Array family : II-A [Matched known repeat from this family],   
//