Array 1 11613-8002 **** Predicted by CRISPRDetect 2.4 *** >NZ_VDZE01000047.1 Virgibacillus sp. SK37 strain DE0373 NODE_47_length_27194_cov_67.283661, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 11612 32 100.0 34 ................................ CCCCTATAACTTTATACAACCATTATAGATGGAA 11546 32 100.0 34 ................................ ACGTGCTTTTAACTTTTGAGTTGGTTCTTGGTAA 11480 32 100.0 34 ................................ TTTTTTTGTACTCTTTGATAATATAGGCTAGTAT 11414 32 100.0 36 ................................ TGCTCTCCGAATGCCTCAAATTATAAGTTTTATTAA 11346 32 100.0 34 ................................ AAATTTAGTTATTCCTAACCCTTGTAAGTCAAAC 11280 32 100.0 34 ................................ AATTTTGATCCAACTATTTTTATGAATGGTTATA 11214 32 100.0 35 ................................ CTATAACTGGAGGTTATACAATGTTAACGGACAAA 11147 32 100.0 33 ................................ CTGAACAAGACTTTAAAAAATTGGTTCATGCTG 11082 32 100.0 33 ................................ AGTCCTAATAATACTTATCTAATACAAGACAAA 11017 32 100.0 34 ................................ TTTCCATTTGAGGAACAATTGTACTGAACATATT 10951 32 100.0 36 ................................ ACCCATGATGTTTCTAATAAACGTATAACAATCATC 10883 32 100.0 35 ................................ TATCTATTACAATACATCTTATCCAATAAGCCTAT 10816 32 100.0 37 ................................ TCTAGGTTGTCAGCCAAAAGGCTTTATTAAATATGAT 10747 32 100.0 33 ................................ TACAATATGAAAGATGCGTTGAAACGTAAAGAA 10682 32 100.0 34 ................................ GATAATATAGAGGCATATAACAGCGATTACGAAA 10616 32 100.0 36 ................................ CGGTAAATGAATTTTATTATATAGGTAGCAGCTTAA 10548 32 100.0 33 ................................ ATAATATTTTCTTAATCTCTCTTTCGCTTTTTC 10483 32 100.0 36 ................................ TCGTTATCCTCTTGTAACCTAAGAATCTCGCTTGAA 10415 32 100.0 35 ................................ GGAAACTCCTCTCGTCGAATACGACAAAGGTGAAA G [10414] 10347 32 100.0 33 ................................ AGTAATTATATAATGATATTCGTTGTTATCACC 10282 32 100.0 34 ................................ ATCTTTAACAGTAACCCTTGATCTAACAGTTCAT 10216 32 100.0 35 ................................ AGTAAATAAAATGTTTCATGAAAGTGATTTGCAAA 10149 32 100.0 33 ................................ TTCCTTCTTCTTGTGCTTTTTCTTGTAATTTTC 10084 32 100.0 33 ................................ TGAATCGCCTCTTGAATGTCAACATTTGTCAAC 10019 32 100.0 34 ................................ CTCCTAATTTTTATTTCTTATCAAAATTATATCG 9953 32 100.0 37 ................................ AATCTCTCCTTAAGTAACTTGGCTTCTTCGTAATTCA 9884 32 100.0 34 ................................ ATTTTCACTTATTTCTTCAAAAGCTGCATTCACT 9818 32 100.0 33 ................................ ACAATAAATCCATCATATGCCTTCATAAATCCA 9753 32 100.0 36 ................................ ACGTGCATCTTTTGCGTTTATTCCTGCTCCAGTATA 9685 32 100.0 35 ................................ TTCATTTCCCCATACTACGCTAATTTTATCGCCTA 9618 32 100.0 33 ................................ CGCTATGAAGTATATGAGAATGAATCATTAGTT 9553 32 100.0 35 ................................ AGGTGAACTGTATTCATATGATAACGAAACGGATC 9486 32 100.0 34 ................................ TGCAGCACTAGAGCCGTCTAATACAGGAGGTATA 9420 32 96.9 36 .......................A........ GGATGCCAAGATGAGTTTTAGACTGCAAAGTGGTAA 9352 32 100.0 33 ................................ TAATTTAACAATAGAGCATATAGAAACTAATTC 9287 32 100.0 34 ................................ TAAAAGACTTAACAGGACGTGAATACCCTGCAAT 9221 32 100.0 35 ................................ AGAAGTGAAAAACAAGCTATAAAAAAATAGCGCAA 9154 32 100.0 34 ................................ TAGCATCTATCCGTTATGCAGTAAGTAGATATGG 9088 32 100.0 35 ................................ TTGTTCTCCGTCCTCACCTTCTGTTAATGCGATAG 9021 32 100.0 33 ................................ AATGGTAGGCCTGCTGAAATCTTAACAGGGTAA 8956 32 100.0 33 ................................ TATATTATCAATTGTGAATACTCTTTTTGATCC 8891 32 96.9 33 ..................T............. CAATATTGCAGAATGTAGAATTTAAAGTAAACA 8826 32 100.0 35 ................................ ATCCAAGGGTATTACCTGAGAGTGTTAAAGATATG 8759 32 100.0 33 ................................ ACTGTTTTTTTTAAACAAGTCCAGGAATCCTAT 8694 32 100.0 33 ................................ AAGGATTTTGGAAAGAAAATAGCACCGTAATTA 8629 32 100.0 35 ................................ TACCACAAGAGGATTTTTAGTTAAGTTCGTTGCCC 8562 32 100.0 34 ................................ TAAATTAGTAGTGTCTATATGCTCGCTAATGGAT 8496 32 100.0 33 ................................ AAACCGTGCCTTTGATACCCTTTGACCTTCATA 8431 32 100.0 34 ................................ ATAACCTGGGAATCCGTAACTTTTTAGCATTTGT 8365 32 100.0 33 ................................ CAAAATGGGTTGACAACAGAGAAAGTAATAGGT 8300 32 100.0 33 ................................ TTGCAGAACTTTATGGAGTATCTTATAAATGGC 8235 32 100.0 34 ................................ ACTCATTCCGCACTCACATCCATCCGATTTTCTA 8169 32 100.0 38 ................................ GTTAAGATGAATAACACGATAGCGACCGTGTGGCCCTC 8099 32 100.0 34 ................................ CACCATGGCTCGTTGCTGCATTATCTGTCGCATG 8033 32 96.9 0 ..............................C. | ========== ====== ====== ====== ================================ ====================================== ================== 55 32 99.8 34 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : TGATATAGTATATTTTTAGAAGAATAGTATTCTTTTGGAATATATGTTCTTGTTTTTTAAAGGAATTCGCTGTCGCACTCTACATGAGTGCGTGGATTGAAATCCCCCTATATGCATACATTACATGCTCAAAATACGGTCGCACTCTACATGAGTGCGTGGATTGAAATTTTAAAACAATGATATTTGACGATGGTAAAGTATGTCGCACTCTACATGAGTGCGTGGATTGAAATTACAATTTTAATCATAACGTTTCATCTCCTTATGTCGCACTCTACATGAGTGCGTGGATTGAAATTTTAAAACAATGATATTTGACGATGGTAAAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTATGTCGCACTCTACATGAGTGCGTGGATTGAAATAAGGAGCGTGTCATTACATGTTTATTATAGAGA # Right flank : TTTTAGTACAATGTAACAGTATCCTTTATTTCCAAATGCGTGGTCTAACTCCACCGTCTTTAAACGGTATCCGCTTTAGGCCTATCTTTTAATGTCCATAATTAAGTTATAAGGTGAAAAGTATGGATGGATATAAGAAGTATAGCCATGCAGTATATGATATCTAGTACTATGTAATCTGGGTAACCTTTGATATCGGTTTATGGGGAATTATCTTCGGTATTTGTGGTCACTTAGTTTTAAATATACAGTGAGAAAATAAATAAATGGGAAAAGACTATTTTCTCCCATTTATTTATAAGAATACATTGGTAGTTGTAAATAGTAAGGTAAATAATAAGGTAAATAATAAGGTAAATAGTAGCTAATGATACAAGAAGGATGTTTGTTGACGATTAAGAAAGCACCAATCTTTATTCAAAAAGGAGGCACATCTTTGAACTGTTGCTGTGATAGTGGAAAAACAAACGATTTAAAAATCGAAGGTGATGTAGGAGCAG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 12042-11812 **** Predicted by CRISPRDetect 2.4 *** >NZ_VDZE01000047.1 Virgibacillus sp. SK37 strain DE0373 NODE_47_length_27194_cov_67.283661, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 12041 32 100.0 35 ................................ CCCCCTATATGCATACATTACATGCTCAAAATACG 11974 32 100.0 34 ................................ TTTAAAACAATGATATTTGACGATGGTAAAGTAT 11908 32 100.0 33 ................................ TACAATTTTAATCATAACGTTTCATCTCCTTAT 11843 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 4 32 100.0 34 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : AATATCCACCATTTTTATGGAAGTAGGTGAAGTGATGCTAGTAATAATCACATATGATGTTAGTACGTCAAGCAATGGAGGAACAAAAAGGCTTAGAAAAGTTTCGAAGGCATGCCAAAATTACGGTCAACGAGTACAAAACTCTGTTTTTGAATGTATTGTAGACGCTACACAATATACAATATTAAAACATGAATTAGAGAAACTTATTGACCCTACAAAAGATAGTCTTCGATTTTATAATTTAGGTAATAATCATAAAGCGAAAGTGGATCATATTGGAATAAAAGAATCTATAGATTTAGAAGAGCCATTATTATTTTAGTTAATGGTGCTAACCCTAAGCGCACATGAAATGCATAGGGGGTTAGCACCAGAAAATAGACTACTAATAGATAAAAAACTGGAAAATAGTAAGAATAAGTTATGTGATATAGTATATTTTTAGAAGAATAGTATTCTTTTGGAATATATGTTCTTGTTTTTTAAAGGAATTCGCT # Right flank : TTTAAAACAATGATATTTGACGATGGTAAAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTATGTCGCACTCTACATGAGTGCGTGGATTGAAATAAGGAGCGTGTCATTACATGTTTATTATAGAGAGTCGCACTCTACATGAGTGCGTGGATTGAAATCCCCTATAACTTTATACAACCATTATAGATGGAAGTCGCACTCTACATGAGTGCGTGGATTGAAATACGTGCTTTTAACTTTTGAGTTGGTTCTTGGTAAGTCGCACTCTACATGAGTGCGTGGATTGAAATTTTTTTTGTACTCTTTGATAATATAGGCTAGTATGTCGCACTCTACATGAGTGCGTGGATTGAAATTGCTCTCCGAATGCCTCAAATTATAAGTTTTATTAAGTCGCACTCTACATGAGTGCGTGGATTGAAATAAA # Questionable array : NO Score: 8.86 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [40.0-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 20828-21651 **** Predicted by CRISPRDetect 2.4 *** >NZ_VDZE01000047.1 Virgibacillus sp. SK37 strain DE0373 NODE_47_length_27194_cov_67.283661, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 20828 32 100.0 34 ................................ ATCCTTTAGCCATGCTAGACCATTGTCTAGTAAC 20894 32 100.0 36 ................................ TATCTATTACAATACATCTTATCCAATAAGCCTATA 20962 32 100.0 33 ................................ TTTAATAGAATCGGAAATTTTCACTTGATACTG 21027 32 100.0 34 ................................ TGCTTTGGAATCTGTTAAAGGAACATCATTCGGA 21093 32 100.0 34 ................................ ATTACGGAACAACTCCCTTTTGCCGAATCCATCG 21159 32 100.0 33 ................................ TGATTATGTATCGGATATGGTTCAAAAAGTAAA 21224 32 100.0 34 ................................ GCAGCGGTTGCCATTCCGTCTATATCGAAAGTAA 21290 32 100.0 33 ................................ ACTTGCATTTCCAGTGATAATATACTCATCAGC 21355 32 100.0 35 ................................ AATCCTCAACATACTCCCACAATTCATCAACTGTA 21422 32 100.0 36 ................................ TCGACTAACCATCATCGAAGAAAACGACGTAGAACA 21490 32 100.0 33 ................................ TAAGATTGTTGGTTTAATCATTCCGAATCACCA 21555 32 100.0 33 ................................ TCATCAAGCATGAGAAGTTCTACCACAAAGCGG 21620 32 93.8 0 ..........T....A................ | ========== ====== ====== ====== ================================ ==================================== ================== 13 32 99.5 34 GTCGCACTCTATATGGGTGCGTGGATTGAAAT # Left flank : CTGTATACTTTCCCAAGTCATGAAGCAAGCCTGCTAAACCAGCAACATGCATAAGTCCTAATTTTCCGCCAAATACCTCAGCTAAATGTTTAACACCATTTAAATGCTCGGAAACGGTTTGAATTTCCTTATCACTTTCACGCACATGGGCAATATAGACCATTTTAAACCTCCTTTAAGAATTCCATAAATAAATAGTACCACTAAATGAATAAATTTACAGTATTTGGTTACTAAATTTTCACATTATCGTATTTTAATCTATTCTTATGAAGTGCTAATAGTATGTTTGTATAATTTTGCTAGGGAGGTCGTTATTATTTTAGTTATGGTGCTAACCCTAAGCACACATAAAATCATTAATAGGTTAGCACTAAGAATAGCCTCGTTATATGTATTTCTTTGTGATATGATGTGTTTATATTATAAAAGATTACATATTTTTACCTAGAATATATCTTTTTTCCAAATGCACGTTCGCATTTTGGGCGAAATTCGCT # Right flank : TGGCGTGTGCCCGATAGCAACGTATCGATAGATAAATATGATTTTTCAAAAAACGTCAATGGTATACTGAGGCCACTAAAAAGTGTCTTCCTTTAAAAACTACCTAACACTTTTTTAGTGGCCTTTGGTATTTGATATTCCTTTTCACAACATTCATCCTACAGACAGTATATTTTCATTATAAAAACCTCGTGTAACTCGGGATATAAGAGATAACTAAAAGCATATTATCCTTCATCAAAGGTTAAAAGTTGAAGAAATAATATTCACCTATTTGATTACTTTTATCGTGGATTCATAACCTAATATACTAAGCCAATAAACATATATAGCAAAAATTGACCGATGTAATGGGTCCATTTCATTACCGCATTCACATCAGCCAATTAACTACTTAATTAACCTCTAACTTTCTTACCTTAAATTTGAACAGTACTATTCCCTCGTCTCAACATTCCTTCCCTCAAAGTTATCAAGCAATGCACGCACTTCATCTGTTG # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.50,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //