Array 1 1635022-1635412 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017448.1 Acidihalobacter aeolianus strain V6 chromosome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ================================== ================== 1635022 37 100.0 34 ..................................... CTCTCCACCTTCTCTCTCACCCATGGGGGCTGGT 1635093 37 100.0 34 ..................................... CGCGTACGATTGTACTCGCTCGTGCACATTCCGT 1635164 37 100.0 34 ..................................... ACTGTTGAACGAGGTCGTTGGAGCGAGCTTGTTC 1635235 37 100.0 34 ..................................... GCTTCATTAGAGAACTTGGGCTTTACGATCAGTT 1635306 37 97.3 34 ....................C................ GGCTGATATGTAATCGGAGTGGATGGTCATCTTG 1635377 36 70.3 0 .......T.AG....-.GT.............CGCGT | ========== ====== ====== ====== ===================================== ================================== ================== 6 37 94.6 34 GTCCGAACGGACCTTCCCCGTTTAATGGGATTAAGAC # Left flank : GCGTACTGGAACAGGCGCAGGCAAGACTGCAGGGCGAGAACGAGAGCCTGGCAAGACAGCTCAACGCCCTGCAAGCCGTCATTCAGGATCAGTCAGAGACCTTGAAGCAGTTCATGGCGCAGCACGCGACCCAGGACGAAAAGAGCACGGCGCGCAAACGGCCATCGAACGATCAGGCCTGAGCACGCACGCGACAGAGACAAAAGCACCTTGCCCGCCGCCTGGCGGGCTTTTTGTTGTCGCTGCGAAAAGAGTCCATCGCCAACACCGACCCGATTACGTAATCGGCATTACGTAACGCGCATTACGTAATCGGGGCAGGGGAGGTTGATTTTTGCGCCACTGCATGCGATGTTCAAAGCCTCGCAGCACCGCTCTTTGACAACCCGACAACCGGCCCGGATCGGCCCCGAGAAAAAGCTAACTTTTTTGCACCGAAACGGTGCAGAGAAAAGGTCTCGTAAGTCTATGATCCGTCAGGCTTCTGAAATATGACAGGA # Right flank : TCGCGGTTGTTTTAGAGCAGCAAGATCAGAAAAGCCTCTTGTCTTCGGACGGAGGTTTTTTTGTGCGTGGCGTTTGAGCGGGTTTGATCCCTTCAATGCAAGCGCGCCGACAAGCTTGCCAATCGTTCAGCTCATGCTGCTGTGCTTTATGGTGTCTTCCATCGAGCAAGCTGATATCTTTGCATCGGTTTGCCTCTTCACAATGACGATGGGAAACAAACGACATGCCACGCAGCGAGAAGAACGAAAAGAACGGCAAATCCGCTCGCGCGTCTGCCAATCAAGGCTGGCTCGGGCGTGGCGTCTGGCGTGTCGCGAATTACTACTGCCCGTTGCAGGAAGATCGGTTCGCGTTGGATCTGTGGCGTATCCTGGAAGGATTTCCGGAGGGGATTTATCGGAGTCTCATACCCTGCACGGTCCTGTACGCGCTGTGGCAGATGTCGCAGCAGGGATGGCTGTCGCCGATGCTGGATGTGCCCATGCATGTGCTGTCGTAC # Questionable array : NO Score: 2.99 # Score Detail : 1:0, 2:0, 3:0, 4:0.73, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGAACGGACCTTCCCCGTTTAATGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [9,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.00,-5.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA // Array 2 1840612-1840007 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017448.1 Acidihalobacter aeolianus strain V6 chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ==================================== ================== 1840611 37 100.0 33 ..................................... CAAAAGGCTGGTGTGCCCACCTTTAACGCGACC 1840541 37 100.0 34 ..................................... CCACCCAGAGCTGGCCTTGCACCTGGGCCTTGTG 1840470 37 100.0 36 ..................................... AAAGGAAACGGGTCACCATGCGACTACGAAATTCGT 1840397 37 100.0 34 ..................................... TTAAGTCCTCACTTCGAGTTGATAATCCTGCGGG 1840326 37 100.0 34 ..................................... GGCACTGCGAAGGCGGTTGCGGAGGAGGCTGGTA 1840255 37 100.0 33 ..................................... CCACTTCGGCGTGGTTAGCCCCGTCCCTTGTCT 1840185 37 100.0 34 ..................................... CCTGGTTGGGGCCGGTATATTCGAGTTCTTCGAC 1840114 37 100.0 34 ..................................... ATCAATTACAGTGAATAGACTGGAAGTTAGAAGC 1840043 37 86.5 0 .....................T..........TGC.T | ========== ====== ====== ====== ===================================== ==================================== ================== 9 37 98.5 34 GTCCGAACGGACCTTCCCCGTGTAATGGGATTAAGAC # Left flank : CCGCGTACTGGAACAGGCGCAGGCAAGACTGCAGGGCGAGAACGAGAGCCTGGCAAGACAGCTCAACGCCCTGCAAGCCGTCATTCAGGATCAGTCAGAGACCTTGAAGCAGTTCATGGCGCAGCACGCGACCCAGGACGAAAAGAGCACGGCGCGCAAACGGCCATCGAACGATCAGGCCTGAGCACGCACGCGACAGAGACAAAAGCACCTTGCCCGCCGCCTGACGGGCTTTTTGTTGTCGCTGCGAAAACAGTCCATCGCCAACACCGACCCGATTACGTAATCGGCATTAGGTAACGCGCATTACGTAATCGGGGCAGGGGGTTGATTTTTGCGCCACTGCATGCGATGTTCAAAGCCCCTCAGCACCGCTCTTTGACAACCCGACAACCGGCCCGGATCGGCCCCGAGAAAAAGCTAACTTTTTTGCACCGAAACGGTGCAGAGAAAAGGTCTCGTAAGTCTATGATCCGTAAGGCTTCTGAAATATGACAGGA # Right flank : GATTAACTGATGATGAAATAAAAAAGCCTTCCTGACCAAGGGAGGCTTTTTTTATTGTCCTGCTATGGATGGAATCAGGCGGATATTCAGTGAGATTGATTAATTCTGCTCACATTATTCAGCATGATAATTGACAGCTAGATCGAATTTGATGATATTCAGCGGCTGTTTTGGGTCGCCAAGGTGGTACACTAGTCGCTTGGGGTGTCTTTTTAAGTCATTGAATTATAGTTAATATTCAGACTTATTGCGGAATCCCTCCCTCTCCGCCACTTCACCCCCCCTGCTGGGGTTTGCTTTTTCTTTCTGAGCAATCCTGCTATTTTTTGCTGAGGTATGCAGCAAATCCGTTTGCCCTGGGCCGGGTTTCCCTAGCCGAGGTCTCTTCCCTAAACCACAGGTTTTGTGCGCAAGAATCTTGCTAACCTGTCTAATCAGCAATGCATGATTGAGGACATTTGTTCGCGCAGCCGTCATCGGGTTGGCATTGCGTGAGCTCT # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCGAACGGACCTTCCCCGTGTAATGGGATTAAGAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.20,-5.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //