Array 1 53941-54185 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_VDSS01000004.1 Pantoea agglomerans strain DE0421 NODE_4_length_567167_cov_60.522998, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                   	Insertion/Deletion
==========	======	======	======	=============================	==================================	==================
     53941	    29	  79.3	    15	.............T.........A.GTGC	ACGCAGGTGGCTGAG                   	
     53985	    29	  86.2	    18	....................GCT....T.	CGGAGCTGAAGCTGGTGT                	
     54032	    29	  96.6	    34	T............................	GGTTTCGTTCGCCTGGCGGGCTGGCATGTACCTG	
     54095	    29	  86.2	    32	......................GA..AG.	TTTCTTTCGCCTGGCGGGCTGGCATGTCCCCG  	G [54115]
     54157	    29	 100.0	     0	.............................	|                                 	
==========	======	======	======	=============================	==================================	==================
         5	    29	  89.7	    25	GTGTTCGCTGCGCGAACGGGCTATGAGAG	                                  	       

# Left flank :   CGATCACGTGCTCGACAGCGTGCTTCCGCCAGACATCCCGGTGCCTAGCATTGCCGAAGTGCAGCGCGCGCTCTACGACGCCACAAAAGCTGTGAGTAATATGCCTGGCGAAGAGGTGAAGCAGCGTCTGCGTACTGGCACCGTGGTGACCACTGACGATCGCAACTGGGAGTTACGTTACTCCGCGTCGGCTCTGCGCTTTAACCTGAGCCGCGCCGTCGCAGTCGATATGGAGAGCGCCACTATTGCCGCGCAGGGTTATCGCTTCCGTGTGCCGTATGGCACGCTGCTGTGCGTTTCGGATAAGCCGCTGCACGGCGAGATTAAGCTGCCTGGTCAGGCGAACCGCTTCTACGAAGGGGCGATTTCGGAGCATCTGCAGATTGGCATTCATGCGGTTGAGTTGCTGCGCGCCGAGGGTGATAAGTTGCATTCGCGTAAGTTGCGGACGTTTAATGAGCCGCCTTTCAGGTAAGTTTTTCGCCGCTGGCGAGGGGGGA
# Right flank :  GGGTTTCGTTCGCCTGGTGAGCTGGCCAGTTTCAGTTACGCCTCTGCAGGCGACCAACAAGGGGGCGCCAGTCGCCGCGCCCCCTTGACCCCGGGCTCCGGCCTGCTTCACCGCCGCTTCGCGGTCCCTTCGCTTCTTCCGGATTTCTTACGGACCGGCGGGACGCGCCATCCCTGGCGCGAACCCGCCTCTTCGCGGCATCCCTGCCGCTCGTCCTGAAATCCCTCATCCGCTCAGCGGTTCTGACGGCCTCCCTTCCCCGCTTTTATCTCTTCTTTTTGTGTTGGGTACGTCGTCGCTGTAAGTCCGGAGGATTATCTGTGTCTCTCTGCCGGGCAGGAAGAATGGCCTTCTACCCTCGCTGATATCGCTTATTTTTGTGTTGGGTAAGTAATTGCAGCAAGTCTGAAGGATTGCCTGCGGTTTTAAGCCTGACAGGAAGAATGGCCTTTCACCCTATCAACTGTTGTCTCTTATTTTTAATGCTGGTGCATTGCCGC

# Questionable array : NO	 Score: 2.59
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.49, 5:-1.5, 6:0.25, 7:-0.76, 8:0.6, 9:0.51,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCGCTGCGCGAACGGGCTATGAGAG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [2,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTGTTCCCCGCGCGAGCGGGGATGAACCG with 85% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-1.50,-0.90] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [1-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [43.3-41.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.87,0.78   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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