Array 1 3430313-3433208 **** Predicted by CRISPRDetect 2.4 *** >NZ_AP014624.1 Chryseobacterium sp. StRB126 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 3430313 47 100.0 31 ............................................... AGAATTTTTTAGTTTCATTTTTAAAGACAAG 3430391 47 100.0 30 ............................................... CAAATTACTTACCCAAACTTTATATTTCTC 3430468 47 100.0 30 ............................................... AAGACAATTGAAATTGTTTTTCATTAATAA 3430545 47 100.0 30 ............................................... TGGCAAGGTCGACAAGAAAGTGGTCCGCCA 3430622 47 100.0 30 ............................................... TTACTCAGGATATTATATCAGGGACTTTCG 3430699 47 100.0 30 ............................................... ATGAGGGAGATGCTGGAGCAAATTTATTTA 3430776 47 100.0 30 ............................................... CTTGTTGACATCTTTCAATAAATTCGTGCT 3430853 47 100.0 30 ............................................... CTGTTATAAAATTTACTGATTTAACTAATA 3430930 47 100.0 30 ............................................... GACATTACATATTACCTCCATTTGTTACAG 3431007 47 100.0 30 ............................................... AAAAAGCATCACATCCCTGCGTTCTTGCAA 3431084 47 100.0 30 ............................................... AGGAGAAATTAAAGACTCACAAAGATTATT 3431161 47 100.0 30 ............................................... AATCAGGAGAAAATTATGCAGAAAACCTTT 3431238 47 100.0 30 ............................................... AACTTTCAAAATATTGGTTACACCGAAACT 3431315 47 100.0 30 ............................................... ACAACCTGAGCATAGCCCATCATCCCATTA 3431392 47 100.0 30 ............................................... CACTAAGAATGGAAAAAATATTGACTTTGG 3431469 47 100.0 30 ............................................... GATACCAGGAAAGAAAACCGCTGCAAAAGT 3431546 47 100.0 30 ............................................... TTCTGGATGCTTAAGTGTCAATCAGATCCT 3431623 47 100.0 30 ............................................... GAATATGGACCGGAAGTTGAAAACGAGCCT 3431700 47 100.0 30 ............................................... AATTAACAAATAGGGCTACGATTAAATTGC 3431777 47 100.0 30 ............................................... AATAACTGCATTGATATAATGGTGACAAGT 3431854 47 100.0 30 ............................................... TTTTTGAAGAATATGATAAAATTAGATATA 3431931 47 100.0 30 ............................................... GGTTGAATTGAAATTTTTTATCGGCATCGT 3432008 47 100.0 29 ............................................... CTTTAAAAATATCAGATCACGATTTTTTT 3432084 47 100.0 30 ............................................... AAAAACAAAGGAAATGCATAGCTTTGAAGT 3432161 47 100.0 30 ............................................... GAGTTAGGAGATTGGAGAGTATAACAATTA 3432238 47 100.0 30 ............................................... AGAGGATAAATTTTATTTGCTTCCATATGC 3432315 47 100.0 30 ............................................... TCAACACTGATCGTTATATCCGTTTCAAAG 3432392 47 100.0 30 ............................................... TGAAGTTAGCAAGTTAAAGTATGAGCAAGC 3432469 47 100.0 30 ............................................... ATTCAATGATAAAGATACACTTCCAAATTT 3432546 47 100.0 30 ............................................... GTACAATGGAAAATGTGCTTATTGTGGCTG 3432623 47 100.0 30 ............................................... TTTAACAGTTTGCATTATTAGAATTTTGCA 3432700 47 100.0 30 ............................................... CCAATTGGATTATATGATGTATACCCATTT 3432777 47 100.0 30 ............................................... GTGTTTTTGATAATTGTCAACATTCCGTTA 3432854 47 100.0 30 ............................................... TCCTATGGGGGAATGTACAACCCCAAAAGA 3432931 47 100.0 30 ............................................... TCCTATGGGGGAATGTACAACCCCAAAAGA 3433008 47 100.0 30 ............................................... TAAGCCTGTGCTTACCTCCTAGGCGGGACA 3433085 47 100.0 30 ............................................... CATGTAATAGATACTACCGTCGGTGATAAC 3433162 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== =============================== ================== 38 47 100.0 30 GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC # Left flank : TACATCAAGAAATGTAATTTTTCCTACCAACGTTAGGGATTATACCATCGTATAAATAAACGGGAACTGAAACAATTTATTTCCTTATTATATTTTACCCAACATCGCTTCTATCATAAATTTACATCTATCTTTCACGAAATTTATGTAATTTTTTATTTTAAATCCAAAAATAGAGAATAATTTATATATTTATTACTTAACAATTTAAAACTATACTATGAAAAATTTAAAGAAAATTTCGAGAGATCAGTTAAAACAAGTGAAAGGAGGTGCTGGTTATTGCAAACCCGGATATAAGTATATCTGTTATGATATTGGCATATGTGATCCGTCATTAGGAGAATATTGCTCTTGTGAATGTGTTCCTTATACATAAAAAACGGGTCCCTTAATGAGAGGGATTTTTTCTTGCTTTATATTTTTGTTGGGAGGTATTTTTAATTATTATCTTCGTGATGAGTCACAGCTTTGGGAGATAAAATTCATCAATACTTTGT # Right flank : CCTCAAAAAACAATCTACTGATTTTCAGTAGATTGTTTTTGTTTTTAGGATTTAAAAATTAGAATAATTCAAGCTGTTGAAAGGTTGGAGGCGGCTCTTCTTTATTTCTGGCAAAGAATATTTCAATATCTCCAAACTGCTTGTCGGTGATGCACATAATAGCAACTTTCCCTGCTTTTGGAAGCATCAACTTCACTCTTTTAATATGAACCTCAGCATTTTCCCGGCTTGGGCAATGCCTTACATACATTGAAAACTGAAATAATGTAAAACCATCATCAAGCAAAGATTTACGAAAGCGATTGGCATCTTTCATATTGGCTTTCGTCTCTGTCGGTAAATCATATAATACTAAAACCCACATAATCCGGTAAGCATTAAACCTTTCGGCATTCATATCAGTTCAGGATAAGAGATCAGACGTTTTTCTCCTGTATAACATTTATACAATGAGGTGGCAGTTGTTTTTACTGCAACCAATAAGGGTCTGGTCTTATCGT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAAATTATTATCTTCGTGATTAGTCACAGC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.50,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [70.0-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //