Array 1 39034-42425 **** Predicted by CRISPRDetect 2.4 *** >NZ_FCNE01000015.1 Acinetobacter baumannii strain L, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 39034 30 93.3 30 ............................GG AGAAATATTTTTTTTGAAAAATTATAAAAA 39094 30 93.3 30 ............................AC TCCTGAGCAATTAATACGCAAGAGAATATT 39154 30 96.7 30 .............................C TTGAGTGTAGCTCATTGCTTACTGCTAAAA 39214 30 96.7 30 .............................G CTTCATCATCATTTAGAGATAAATATATAA 39274 30 96.7 30 .............................C ATCAAAGGCTTTGAGGGTAAGCGCCTTTGG 39334 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 39394 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 39454 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 39514 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 39574 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 39634 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 39694 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 39754 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 39814 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 39874 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 39934 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 39994 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 40054 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 40114 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 40174 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 40234 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 40294 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 40354 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 40414 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 40474 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 40534 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 40594 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 40654 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 40714 30 100.0 30 .............................. GAAAAAAAGCATCATATTGTTCGGGGCAGG 40774 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 40834 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 40894 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 40954 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 41014 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 41074 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 41134 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 41194 30 96.7 30 .................T............ CTCATCGTGAAGGTTTTGCAAATATGCCTT 41254 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 41314 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 41374 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 41435 30 96.7 30 ............................A. AGCACGAGCAAGTTCTTGAGATGCCAAAAA 41495 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 41555 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 41615 30 100.0 30 .............................. GGATGTGCAATTTGGTCAAGATGTGGGGAG 41675 30 93.3 30 ............................CG AACACGACTTGAACCAAAGTTAGAAAAATA 41735 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 41795 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 41855 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 41916 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 41976 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 42036 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 42096 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 42156 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 42216 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 42276 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 42336 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 42396 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 57 30 95.4 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : TAAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAA # Questionable array : NO Score: 5.31 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.28, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.10,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-21] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //