Array 1 1194968-1195611 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLWS01000002.1 Actinocrispum wychmicini strain DSM 45934 Ga0310477_102, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1194968 29 96.6 32 ............................G GTGATGCCCTGGCCGAGGTAGTCGACGACACC 1195029 29 100.0 32 ............................. TTCAGGCCCAGGGCGACCAGCCGGGCGATCTG 1195090 29 100.0 32 ............................. TGGGTCCTCAAGGACAGGCGCTCCGCGCTCGC 1195151 29 100.0 33 ............................. CCGGCCGCACGCTCTCGGTGATCGTCTGTGGGC 1195213 29 100.0 32 ............................. AGGTTCATCAGGCGGGACACGTCGTGCGTGCC 1195274 29 100.0 32 ............................. GACCCCGACGTCCTGGTCAAGGTCGACGGAAA T [1195285] 1195336 29 82.8 33 ....................AG..C.G.T CGCGCCACCCTCGGCGAGGGCCTGGTCCGGGCC 1195398 29 79.3 32 ..C.......TAC.G.............G TTGATCTACCAGTCGGTGCCGCGTTTGGCAGT 1195459 29 79.3 33 ..C.......T..GG....T........T TGGCCGTAGCGCATGAAGTGCGGGTATTCCGCG 1195521 29 79.3 31 T....T..G.....T..........G..A CTCAGCGGTTGGCCGATCATGACCCGGAGCC T [1195524] 1195582 29 82.8 0 .......T..A...G........A.G... | T [1195586] ========== ====== ====== ====== ============================= ================================= ================== 11 29 90.9 32 GTTGTCCCCGCGTACGCGGGGATGGTCCC # Left flank : GTCAGAGGTCGAATACATAACATTCAACGGTTGTGGAGCTGAGGGGATTCGAACCCCTGACCCCCACACTGCCAGTCCAATTCGGACAGTGCCTCTCACCTGTAACTCTACAGTATCGCCACGTCAAACATGTTGCAACCTATGCGATAGAGTGCAGTTCACTGCCGTAGAGTGTACGCCCAACACCGACCCCTGCTCCAGATTGCTCCACCCATGTTCAGCATGAACCAGACATATCGCCCTAGTACGGGCGAGTTCCGGGTCGTTGTCGCCGATCACCAGGTCATTGCCGTCGGCAACCGCATCCGCAACGACTGCACCGTCTGTCATGACGGCAATACAACGGAACCATGAAGCCATGGTCAAATCGATACACGTGACCGCCGACAGCTTAGAGTCAGAACCCACGAGGGTGCGCTTGCTGCACCGTCCGCCGGGCGTAAGCCGACGCAGTGAATGTAAAACAAGGTTGCCGATGACATACTGGCTGGTCATCAAGT # Right flank : CGCCTAGTGCAGCGTGCTGACCGTCTCCGAGCGTCATCTCCCACACTGGGCTGCGTCAGCTACTGCTCAGCGGAAGTCCCAGACCATAGAAGCCGCGAAGGGCCTGCCGACAGGTTCGAACTTATGAAAGCTAGGCATGCCCTATCACACTCGGCCTTGAGCGGGAGTGTAGTGTCTCGTGGCATGGAGCCATTGACAGGACGACAATCCTCGCGGGTCCCAGCTGCCACTGGGTTGGTCCCTTATGGAAGCGAGGGATAGCTCCGTCCCCGCGTACGCGGGGCTGACCGGACCTCAGAATCGCCTTGAACAGGCAAGAAGGTTCAAGAGATAAAGCGAGTGCCTCCCGGCTGCTACCGAGAGGCACTCTTCTCTTCCCGGCTGTCTCCAACAGAAGGAAGTGGTCATGATTGTAAACGAGCCTCCGACGTCGTCAGGCGTGAGCGATGATGATCGGCCGTGGACGCTTCGTACATTGGTCATCGGAGTGATCGCTGGCG # Questionable array : NO Score: 5.60 # Score Detail : 1:0, 2:3, 3:0, 4:0.55, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.79, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTCCCCGCGTACGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCACGCGGGGATGGTCCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-26] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 1203801-1204010 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLWS01000002.1 Actinocrispum wychmicini strain DSM 45934 Ga0310477_102, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1203801 28 100.0 33 ............................ CGGGGAGGACCAGCAATGACCAGCAGCGTCCCG 1203862 28 100.0 33 ............................ CACCAGCAACGCCAGCGCGACCCGCGCGAGCTG 1203923 28 100.0 33 ............................ CTGTTGTCTCGCCGCGTTGTCGATGCTGTGGCA 1203984 27 71.4 0 ......G....AG...T.....-..AAG | ========== ====== ====== ====== ============================ ================================= ================== 4 28 92.8 33 GTCGTCCCCGCGCGAGCGGGGATGGTCC # Left flank : CGAAGTCCGCCCACTGCAACCCGTCCTGGACTCCATCACCGCCGGCCGCCGCTACGCCTTCCGGCTACTGGCCAACCCCACCCGCTGCATCCGCACCGACGACAACCCCGAACACCGCAAACGCGTCCCTCACCGCCTGCCCGCCAAACAAATCGAATGGCTCATCAACAAAGGAGAACAACACGGCTTCGTCATCCCCACCAGCCGCACCGGCGGACCGGACGTCGCCCCCGCCCCCGCCCCCACCCTCCGCGGCAAGAAACAAAACCACAACATCACCATCGAACCCGTCCGCTTCGACGGCCACCTCGTCGTCACCAACCCCCGCACCTTCACCCACGCCATCCTCAACGGCATCGGCCGCGCCAAATCCTACGGCTGCGGCCTCCTCACCCTCGCACCCACACAAACCCACATAACCCACCCACACCCGACCGCCCCACCATCCCAAACCGAATGTGAAACACTGTTACATTCAGCGAACCTGCATGTCAAGAAGT # Right flank : GAGATGAATGCTCGCTGTGGAGTTGTCAATGACCGAGCGAGTAGCAGCGGTCGACGGATGACTCGACGGCGCGTTGTGGTGGCTGTCCGGCAGCCAGGTTTCCCTGCTGTCCATGTGCCTTGGGTTGGCCGAAGCCATGTTGCCGTACTCAGCGCGGTGTCAGTCCGGAATCTCCTCACGTCAGCAACGGTCTGGCTGTCGTTGCTGCCGGTGGCCACTGTCGTTATGGCTATGTGATTGGGCTATGTGTCAATCCCCTGGAATCGTGGACACGGTCTTATGCCACTTCGGTCCTGACCTGCGCCGCTGATGCTGCTCGTGCGTATGCCATCTGATGCTCGAACGGGATCGGGGCCAGTCCATCGTTGGCGCTGTGCCGGCGGGTGGTGTTATAGAAATCCGCGATCCAGGTCGCGACCTTGATCCGCGCCTCAGCTCGTGTAGAGAAGTGCTGCCGGTGCACGAACTCGACCTTCAGTGTCGAGTTGAACGCCTCGGCC # Questionable array : NO Score: 5.67 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTCCCCGCGCGAGCGGGGATGGTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCTCCCCGCGCGAGCGGGGATGGTCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [55.0-36.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 41465-41737 **** Predicted by CRISPRDetect 2.4 *** >NZ_SLWS01000007.1 Actinocrispum wychmicini strain DSM 45934 Ga0310477_107, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 41465 29 100.0 32 ............................. AACGGACCGAGGTCAACAACGACACACAGGGA 41526 29 100.0 32 ............................. CGGTCTGCCAGCCCGGACAGGGTCCACCCGCC 41587 29 96.6 32 ............................G AGGGATGGCCGGGCCCGCGAACTCCGCCCGGC 41648 29 82.8 32 ...........G.GCA........A.... GCGGCGACCTTCCTGGTGGCGGCGTTGTTGGT 41709 29 79.3 0 ....C......TT.T....A.......T. | ========== ====== ====== ====== ============================= ================================ ================== 5 29 91.7 32 GTCGTTCCCGCCCAGGCGGGGATCGTTCC # Left flank : GACGCCGGCCACCTCCATGAGCTCACGAGCCGCAGCGCCCCGCGGCGTCTCGGCTGACTCGACCGTGCCACCCGGCGGTACCCACCCACGCACGCGATGCCGCACCAGCAGGACGTGGCTATAGGCTGGTTCGATGGCCCAGACCTCGGCCGCGAGCGGCTCGATCAGCGTCGGCCGGGCGCGAAGCCACGCCTGAGCGCCATCGAACTCCATCGCGGCAAGGCGAGCATCGGCGACCGCCGCGTCTACGGTCATCTGGTCAATCACTTGGCCCAGACTATGCCGACGCCGCGGCCACTCTTGGCATTCCCTAAGGGGCACGTCGACCGAAGTGGTCGACCAGGTCGCGGTGCGCTGGGACATGGACGCGATCAATGACGGTCTGCAGCGAGCCGAAGGCCGACCAACAGATAGTTCGCCTAGCCAATCATGCCGGCAGGGCAACGAGTGGAGTGAACGAAAACCGCCATGACGTACGCTAAAGTTGCAGGTCAAATAGT # Right flank : CAAATGCCGGGATCATGCCGTCTGAATCGCCGCGCTGCCTGTCTCGCCAGCCACACCGCCGTCCAGTCGCGGGACATCGGCCCGCGCTTCGAACTCAGATCGAACGACCGCGACGAGTCGTCGCGCCCGCGCGGCACCGACTCCCAGCCGAATCCGCAGCGAATCAGCCGATATCGCTTCTGGTGTGCCTTGCGATGAGCAGCATCCTCCAAGCGCGCCAGCGCCAACAGCACCTCCGGCAACCGCCCGTCAGCCTCCCGCCGGCCACCCCGCCGCACAACGACATCCTCGTCAAACTGAAGCTGCACCTCTCCAACTCCGTCATCCGGCTTCACAAGAACGCCCAACCCCAGGCGATCGACGTCGCACCCCGCCACATTCGGACTTGCCGTGCCGATCCCTTGCAGCAGGCCGGGGCCGACTTCCGACCACCCGATCAGCAGGAGTGGCCCGACCGCGTCGAACGCCGCCTTCCCGTACTCCCCCGCGACAAGCGGCTC # Questionable array : NO Score: 2.57 # Score Detail : 1:0, 2:0, 3:0, 4:0.59, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGTTCCCGCCCAGGCGGGGATCGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.50,-9.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [51.7-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA //