Array 1 61072-62060 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEVFT010000026.1 Pseudomonas aeruginosa strain MS6005 NODE_12_length_209832_cov_15.674142, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 61072 28 100.0 33 ............................ ACGTTGCCCCCATCCTGACCATCAACGGAGCAA 61133 28 100.0 32 ............................ GGTGACGCTGCACATCGTCGCCGCCGACTTCA 61193 28 100.0 32 ............................ AATCAGATCCCTCGCCGAGCGGCGCATCATTG 61253 28 100.0 32 ............................ AAACTCATCAGGCACCGGCAGCGCAATCAACT 61313 28 100.0 32 ............................ TGGCCGCTCGACCACGCCGGCATACTCACCGC 61373 28 100.0 32 ............................ TCAACAAACGCCACGGCGAACATGAACACGCT 61433 28 100.0 32 ............................ AGCCACTGGCATTCGAATGGGCCGGCCGGGAA 61493 28 100.0 32 ............................ TGGCGAAGGGCAGGGATGACAAGGGACAGCGT 61553 28 100.0 32 ............................ TTGTAGGGCGGCTGGGTATCGCTAACCATCAG 61613 28 100.0 32 ............................ ACCGCAATCCGTCAGTTCCAGTTCCGGGACAT 61673 28 100.0 32 ............................ ACCTCAAGCGGAAAGCAGATCGGCCGGACGTT 61733 28 100.0 32 ............................ TCGACGAAGCCGAGACGTTCACCAGCGCCCAT 61793 28 100.0 32 ............................ TACCACCAGGGATCGCCGTCGAACGGCGACTT 61853 28 100.0 32 ............................ TAACCGCGCCCTGGCGCATACACACACTGGAG 61913 28 100.0 32 ............................ AGGAACGCGACCAGGGCGCAGACGGCAACAAC 61973 28 92.9 32 .....................A..A... TGTCTCGAAGTTCATAAGCGGGCTTCGGGCGA 62033 28 75.0 0 T.........AC.....TC.TC...... | ========== ====== ====== ====== ============================ ================================= ================== 17 28 98.1 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : GAAGTCGTCGAGGACGAACCAGGCCTGGTCGTCGATCAGCAGCGCGCGCAGCAATCGCTGCTGTCGGAAGAAGTAGTGCGGGGCAAGCTGGGTATGGCCGTGCATAGGAGAAATCCTTCTCTGAGCTGTCCGCTGCCTGGCTTCTGCCGGCGCGGCAGGGAGACAGGCCGCTCGTGGGTGTTGGGCCAGCAGGCTGTGGCCTGCCGGGAACCGAAGTCGCCGGCGAAAAAAGCCTACTGACAGCGCCTGTAGGACGGCAATGGCTAAGCCTTGTACGAAGTCTCCGATGGCACAAGCCCGCTGAACAGCTAGGCCGTTCTGAACATTACGCCGGCATGGAGAAAACAGGGGATGGACGCTATGCTTGGGAACCCTTTTTTTGGTGGTTTTTTAAAGCCCTTTTAGATCAAAGGGTTAGAGATCGCTGCAAAAAGAGGGGTTTTTCCGGGCTTTGGCGCTGGAGCCCTTGGAGCTGGGAAGGTTGATGGTTTTTTGGTCTT # Right flank : ACGGCCAGCAGCCCTGAAGTATCGATTGATGCGGTTCGCTGTCGGCCGGGGTCACCAGTCGAAACGAAGTCCCTTTCCATGGGACTTCGTTGCGGACATGCCGATAAGGCGCTGACGGGGTTCTTCAGAACCAGGGAACGAAACCTCCTTTGCTCAACCCGTAACAGGTGAATCCTCCTTCCTCTGCCGTCACCTGCAACGGCCCGTGGCGGATGAAGAGACGGAAGTGCTGTCCGGTGCTCTGGCTGCGTAGCGTGACGAAGGGCAGGTCCAAGGCTCTCGCGACCGTATCGGGAATGCGTTTCCGAGCCTCCTCCTCACTCAGATCGTGCCGGCGCATGAGCCGCCGCCGCAGACGTTCCGGATTGCTTTTCACCTGAACCCGACTGACCTGACGGTACGGTGTGGGGTGAGGCACGACTGCCGGTTCTCCGAATTGCAGATGGTCCCGCAACCCTTCCAGCCAGGGCCGGGCGAGCAGGGCACGAAGGTCGTCCGCC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 71572-70584 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAEVFT010000026.1 Pseudomonas aeruginosa strain MS6005 NODE_12_length_209832_cov_15.674142, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 71571 28 100.0 32 ............................ AGATTCGTCCGCCCCAGCCGGCCAAGCTGAGA 71511 28 100.0 32 ............................ GACAGAAAGCGATCTGGATTCCGACCCATGCC 71451 28 100.0 32 ............................ CCACCGAAGAACCCTTCGAAGGCGCCCATGTC 71391 28 100.0 32 ............................ AATCACTTCAGTATCCAGGCCGTACCATTGCT 71331 28 100.0 32 ............................ GTCAGACGGGACAGATCAGCATCCGGCTCCTG 71271 28 100.0 32 ............................ TGCCGGCGGGAAGGTTGCCGGCTTCCCTGGCA 71211 28 100.0 32 ............................ TGGGCGCTGGCGATCGATGTTGATTGCGAGCC 71151 28 100.0 32 ............................ TGGACACCATCGATCCAGGCCAGCCACGTGCC 71091 28 100.0 32 ............................ CCGGACGCCCCTAATCTGGAGGGCTCCTGGCA 71031 28 96.4 32 ..A......................... TTTCCCCGCGAGGCATAGCAGGGATATCTTGT 70971 28 100.0 32 ............................ TACAAGCAGATCGGCGAGCTGAGCGGCAAGGA 70911 28 100.0 32 ............................ GTGTGTGCGGCCAGCTCGGACCCGAACTTGAT 70851 28 100.0 32 ............................ ACTGAAAGACTCAGAAATCGTGCACGCCTTCC 70791 28 100.0 32 ............................ GGCAATCGCCGCGTCGATATCTTCCGGGGTCA 70731 28 100.0 32 ............................ TCGTACTGGTCGAGATTTCCGATTCGGAAGCC 70671 28 100.0 32 ............................ TTCGACGCCGCTAGGGTTGCCGCATCGCCGTC 70611 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 17 28 99.8 32 GTTCACTGCCGTGTAGGCAGCTAAGAAA # Left flank : GACATGTGTCCGCGTAGCGCCACCCTGTACGTAGACACCCATGCACTCCCCACGCACTTGTTCAACAACGCGAAAGTGCGCTTGAGGTCGGCGATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCCATCACAAGACCTTTCGCGTCCGAACGGCACGCTTGATCGCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGGCCTCGAAAAAAGAGGGTTTCTGGCGGGAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGAGCTA # Right flank : CTCGAACCCACCTCGGCCACAACAGCCGCCGGGTTCGCTGCCGTCTAGGCAGAACCACCCTCCCCATCCCACTACCAAACATCCGAATATAAAGTTCCTACCCCGCCCGCCAGCCTCGCCCGTCCACGACAATGTGCCCCGCTTGGAAGCTCACGCTCCTCATACAGACGAAAACGGGGTAGCGGCAATCGGCCATATCCGCTAAACAGTTGCCTTGGCGCAGAATTCGATAGATCCGATAGGGACAGGCCACGGTCAACATGGACGACATTTCTCCCAGCGAACTGAAGACGATCCTTCACTCCAAGCGTGCCAACCTGTACTACCTGCAACACTGCCGCGTACTGGTCAACGGCGGGCGGGTCGAGTACGTCACCGACGAAGGCCGGCATTCGCACTACTGGAACATCCCCATCGCCAACACCACCAGCCTGTTGCTGGGCACCGGTACCTCCATTACCCAGGCAGCCATGCGCGAACTGGCCAGGGCCGGGGTATTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGTAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [31.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //