Array 1 12137-14408 **** Predicted by CRISPRDetect 2.4 *** >NZ_JXQK01000050.1 Prevotella pectinovora strain P5-119 contig50, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 12137 47 100.0 30 ............................................... ACCTATCTGAATAGTACTCTTTACAATTCA 12214 47 100.0 29 ............................................... GCAAACTCACTGCATTTGAAATTGAGAAA 12290 47 100.0 30 ............................................... GTCCGCATGGCTATTTCATTCGGCTTGTAA 12367 47 100.0 29 ............................................... AAATTCTTTGCAGCAATCTGCACTTTCTT 12443 47 100.0 30 ............................................... TTAAGCTGCCCGATCGTGTAAACAAGCGGG 12520 47 100.0 30 ............................................... GTAAACTCACTCCTTTAGAAATTGAGAAAT 12597 47 100.0 30 ............................................... TTTAGTTGTTATTATTGTTTGCTGAAAATT 12674 47 100.0 30 ............................................... TGTTACCTCTGCTTCTCCTGCCTCCGCAAG 12751 47 100.0 29 ............................................... ACATTGAGGTAGCTACCGAACATTCTCCA 12827 47 100.0 30 ............................................... TGGTCTCTTCCGACTCGATGATGCAGGGCA 12904 47 100.0 30 ............................................... TGCTGAGTAATACGACGACCACGGCGGCGG 12981 47 100.0 30 ............................................... GGGCTGATTATCAGGTGTTTAGCTATTAGA 13058 47 100.0 30 ............................................... ATTAATCGTGAAAACAATAAGTTTGCTGCA 13135 47 100.0 29 ............................................... TACTACCGCTTTATCTACTAAAATAGTAG 13211 47 100.0 30 ............................................... AGGTGGGCGACCGCTTTGCAACTGATGCGT 13288 47 100.0 30 ............................................... GTCAATGTGTGAGGGGCGTGCCGATCGCAC 13365 47 100.0 30 ............................................... AGTTGAAAAAACTGCTTATGCAGTTATGCT 13442 47 100.0 29 ............................................... TCTATCGAGCAATCCCTTAAAGTCGTCCA 13518 47 100.0 29 ............................................... GCACCATTTGCCACTCAATCTTATAGCTG 13594 47 100.0 30 ............................................... AAAAGCTTTATCTGAGAGTTGGTCGCTTGG 13671 47 100.0 30 ............................................... AAGCTTTAATTGATACTCTTGAAGCTAATG 13748 47 100.0 30 ............................................... TAATGTGGATTCCGTTCACCAAAGAGTTTG 13825 47 100.0 30 ............................................... TTATGTCAAGTATCATGTCATTAAAGACAA 13902 47 100.0 30 ............................................... CGGTCAAGTTGTTGCACGTTGTTTCGTTAA 13979 47 100.0 29 ............................................... ATAGCCTTGGTTATGTACCACGTTACATC 14055 47 100.0 30 ............................................... AAAAAGTGAGGACTTTAGTTAAAAGGAGAA 14132 47 100.0 30 ............................................... AGGAAAATTTGCCATAATCGTTTGTGTTTT 14209 47 100.0 30 ............................................... TGGAAAGAAGGTCATGGACATCGAATGTAT 14286 47 100.0 29 ............................................... GATAGATTTGTGTAAGGTTTAATGTGGAT 14362 47 95.7 0 .................................C.T........... | ========== ====== ====== ====== =============================================== ============================== ================== 30 47 99.9 30 GTTGTTGATTCTACCACAAAGGTAGGAAATTTCGAGCAAATCACAAC # Left flank : ATTCTTGTATTTTTTGACCTTCCCACTGAAACCAAGAAGGACAAGAAGGAATATATGCTGTTCCGCAAGCGGCTTCAGCGCGACGGTTTCACCATGTTTCAGTTTTCCATATATGTGCGCCACTGCGCAAGTATGGAAAACGCTGAGGTGCATATAAAACGCGTAAAGTCATTTCTCCCCGAATATGGAAAGGTGGGCATAATGTGCATTACTGACAAACAATTCGGAAACATCGACTTGTTTTATGGTAAGAAACCTCTACCTCCAAATGCTCCAGGACAGCAGCTTGAACTATTCTGAACTTTTATAGAAGTTTATCCGCATTACACACAAATTAACTCACACAAATGACTTTCTATGGTCAAATAAGTTAAGAAACCTCTAAAAACAGAAAAGAAGAATTCCGTCAACACATACAGAATTCTTCTTTCTCAACAACATTTTTTATTTTCCTAATAACCCATATAACCTACTGTAACACAGCATTTTACACAGACTGT # Right flank : CTAATTTCTCCTATATATATGTTCATACTGTTGATTCCACCACAAAGTTGACGAGTTTGCAGGGTGTATGGTAAATATATGGCACACTTGGTATGTCAGGAATTGCTGGAAGTAAAACATTTCAAAAAGCAAAAATACAGGCATGACCGTTGGATAATTATCAAAAATACCGTAAATTTGCTGATTGAATAATAAATGCAGCATTATGGCAGAGAAATACATCAATCCACATACCGATTTCGGCTTTAAGCGCCTGTTCGGTTCTGAGTTCAACAAGGAGTTGCTTATCAGCTTTCTGAACGCCATGTTCCATGGCGAACAGAACGTGCAGGACGTAACTTATCTCAACTCCGAACAACTTGGCGACCGTGTGGATGCCCGCCGAGCCATCTTCGACGTATATTGCGAGAATGACAAGGGAGAGAAATTCATCGTGGAGATGCAGAACGTATACCAGGAGTTCTTCAAAGACCGCACCATCTATTATTCAACGTTCCCCA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTGATTCTACCACAAAGGTAGGAAATTTCGAGCAAATCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.70%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.80,-6.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 13711-12949 **** Predicted by CRISPRDetect 2.4 *** >NZ_JXQK01000043.1 Prevotella pectinovora strain P5-119 contig43, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 13710 36 100.0 30 .................................... GATGCAAGAGATACACCTACAATGTTTCAA 13644 36 100.0 30 .................................... GTCATGAACACCTTGCCGACTTCGGTTATC 13578 36 100.0 30 .................................... TAAAATGCGAAGAATGCAATACCACTAATA 13512 36 100.0 30 .................................... ATACATCGATTATTAACTCTGCTTGTTTTT 13446 36 100.0 30 .................................... AAATTGTTATTAATAAGTTTATGATAAATT 13380 36 100.0 30 .................................... TGCTTTCTGCAGATTCTCATACTCTGAATC 13314 36 94.4 30 .........................A....A..... CACAGAGTGCGTATACCATTTGTACGTTTT 13248 36 97.2 30 .........................A.......... CCTCTTTGAACATACCTCTCTTTGCTGTTC 13182 36 97.2 30 .........................A.......... CACCAATGATTTCTTTTCCATGATTGTAAC 13116 36 100.0 30 .................................... AGGTTGAACATGTTTTTATAGGCATAACGC 13050 36 91.7 30 ..............GA.........A.......... ATTTTTTCACCTATAAGATTTACATCTTCA 12984 36 94.4 0 ..............G.......A............. | ========== ====== ====== ====== ==================================== ============================== ================== 12 36 97.9 30 GTTGTGGAAGGTCCAGTTTTGAGGGGCTATTACAAC # Left flank : CATCATGGAAGAATTCAATAAGTATGACCAATGCCGACCTGAAATATCGAGCATCGTATTCAACTTAGAGAAATGGGCATTCGACACTTATCCTGAGTTGTCAGCGAGAGTTGACAGAGAAGAAAAGGTTGATTTCAAGTCCATCTTAAAGATTCTCCTAAACAACAAGAATATCAATAAAGAACAAAGTGACATATTGCGAAAAATCAGGAATGCTTTCGACCACAACAACTATCCCGACAAAGGTATTGTTGAGATAAAGGCTTTGCCTGAAATTGCTATGAGCATTAAAAAAGCATTCGGAGAATATGCCATCATGAAATAGTTCCATCCTCTGGTGTCATCAGATATATGATGGCACCGGAGGAGGAAAATAACAGTACTTATTTTGGCAGAACATAAAATATTTCTATTTTTGCACTACCATAACACTCAAATATTTCATTTATGAAAACAAAATCAATTAAAAACATTGATTATAAGGATGTTATCGATTATAG # Right flank : ACCGGGAATGGTTCCAAATTTGAAGGAACCATTCCCGTTTACTTTTTCCTTGCCATACCCATCATTTCATTCTATCTTTGCAGCGTCAATCATCGGAACCACCCCGCTGATTGACGCTGCAAAACGTTTGGTGGCAACTCGAAATTGAAATAAAAAATGGAGAACACAATAAGACAATAGAAGCACATGACCAAGAGGTTGCAGCAGATGCGGAATGGTTCCAAAACAGAAGGGACCAATGTTAACGCCAAAACCTTTTGCTATCATAAGAAACTGGCATACCTTTGCTCCACCGAAACCTCCACGGTGTGTACAAAAATGGAGGCTCACCAAAACAAGAAAACTATGACAGAATCAGAAAAAGAACGTTGGCAGCTCATCGGTGTGATTGCAACCGCAGTCGGTACCGCTATCGCAAGCTACTTCGCAGGAAAAAAGTAGAGCTATGAGCAAGAGGATAGAGGTTCTCCACCTACACGAATTGTTCCAAATAGGTGAGA # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGAAGGTCCAGTTTTGAGGGGCTATTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:52.78%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.40,-4.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //