Array 1 149268-150775 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQMH01000007.1 Corynebacterium sp. 73A NODE_7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 149268 36 100.0 28 .................................... CGCCTCCGACGGTGGCGTGATGTTCAGC 149332 36 100.0 28 .................................... CTATGGGGTGTGACCGTGAAGGAGTTAC 149396 36 100.0 28 .................................... GGCTAGTCTCACTGTCTCTGCTTGTTCT 149460 36 100.0 28 .................................... ATTGGGCTTTGTTGCCTCCCGCACCCGG 149524 36 100.0 28 .................................... CGCCAACATCCAACCCCTGCAAGCCCGC 149588 36 100.0 28 .................................... GGGATCGACATAGGGCCGCGATGGACCG 149652 36 100.0 28 .................................... ACGATTGGCCGGTCCTCTACCAGTACGG 149716 36 100.0 28 .................................... TTTCGAGGTAGTGACGTGGCCCGGGCAC 149780 36 100.0 27 .................................... CTCGTAGAGAATACCGCCATGCACTCA 149843 36 100.0 28 .................................... AGGCGGTGGCGTACCACAATGCTTTCTC 149907 36 100.0 28 .................................... ACCAGACACCACTCGAGCAGCACCTCCG 149971 36 100.0 29 .................................... TACTACTTCCGAGGCCGTACAAGCGCTCA 150036 36 100.0 28 .................................... TCGCGGCGGTGCACAGCCCAGCGCACCC 150100 36 100.0 28 .................................... ATAGCCAACGTCTCACGTGGCGAGACAA 150164 36 100.0 28 .................................... CTACATCTAGTAGGGCGTCGAGCGTGGG 150228 36 100.0 28 .................................... ACTGTAGCGGGGCTCACGCACCAAGCAC 150292 36 100.0 28 .................................... GTCATCGGGCTGGGCGAATGCCGATCCA 150356 36 100.0 28 .................................... ATCCCAGCCGTAGAACTTCCACTCATGG 150420 36 100.0 28 .................................... TTAGACGGGATACGGTGCTTCGCGCGGG 150484 36 100.0 28 .................................... GGTCGAGGACGTGCACGCTGGGGCGGCG 150548 36 100.0 28 .................................... TGGGTGTGGGAGTGTCCACCGGCGCCGC 150612 36 100.0 28 .................................... AGCGGCGTCAGAGGTGTATTCCGGAGAG 150676 36 100.0 28 .................................... CACTGCAGCGTGGGATACGGCCGAGGGG 150740 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================= ================== 24 36 100.0 28 GAAGTCTATCAGGGGTATATCGAACTGAACCCCAGC # Left flank : CATTCAACAGCAATGGCCAGAGTGTATCGACGGTCTTTCAAGACTTTGCACAGCATTTTGGTTTGTACGTCGAAGGAACAGTGGATCGGCTACAAGTCCCGCGTTGGGAAGGGCAGCTCAGTGCCAGCGAAGGACAGTGAACCGGTGTGGTGCGTCGTGATGTTTGACCTTCCGGTGAAGACCAAAAACCAGCGTAGAGAAGCTAATCGCTTCCGCAACCGGTTGTTCGACCTTGGGTTTTGCCGCGCCCAATTCAGCGTCTACGTTCAGTATTTCCCACTGGCGGCGCGTCTCAGCACGATAGTCAAACAGGTGAAAGGCGAACTTCCCGCAGGCGGAGAAGTGCGTATTTTGTCCGTGACGGACCAGCAGTGGGCAAAGGCGATCCGTTTTTCGAACCACAAGGAACAAGCGGTCGAAGAAATCCCCTCTCAACTAACAATTTTTTAAAAGCGCATGCCGAAAAAGACCCAGTTCAGGCCCTGTTTCTGGGCCTCACT # Right flank : CGAAAATGGGCATGGTGGCGGTCTCGGTTAAAGCCTATGGCGCTGCATCACGCTTAACGGCAGTACCGTTTTCCACGTCCTGTGCTGCGATGATCCTACAACCACAAGCCTGTGGCTTTCTGCAGGATCACCGCATCGCGACCTACCGCGTCGCCTCCTCCAACAGGTACAGCACGTGCTCATAGCTCCGCCCAGTGATTTGCTCCATGCCCAGCTCGCAGGTGCGGTTGGAGGACACATAGGCGTCCACGCGCCCATTGGCTTCGGCCTCGGCCAGCCCGGCGCGCTCGTCGCGGGTGGCGGCGTCGAGAAGCTCGGGGTGGAGCATGCCGCGGTCGCCGGCGGTGCCGCAGCAGCCGGCGCCGCGGGGCACGAAGGCCTCCTCGGCGGCGAAACTGGCGACGCGCACGAGGGTGTCGCTGAGTTCCATGTGGGCCAGCGAGCAGTTCGGGTGCACGGCCACCCGCCCAAGGCGGCGGGTGGGTTCAAGGTGCTCGATC # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAAGTCTATCAGGGGTATATCGAACTGAACCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.70,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [53.3-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.01,0 Confidence: HIGH] # Array family : NA // Array 1 229651-231691 **** Predicted by CRISPRDetect 2.4 *** >NZ_PQMH01000002.1 Corynebacterium sp. 73A NODE_2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 229651 28 100.0 33 ............................ CTGTCGATGAACTGGTGGATTACGTAGTTTCCA 229712 28 100.0 33 ............................ TTGTCCCGTTGTCTTGAAACGTCACGCCGCTGC 229773 28 100.0 33 ............................ TCCGGGCAATTTCGGATTCACCGTAGCCCCCGT 229834 28 100.0 33 ............................ TGCCTCATCGAGGTATACGGTATCGCCAGATAG 229895 28 100.0 33 ............................ CTCACGCTCTTCATCTTCAAGAGGGCGCTTCAT 229956 28 100.0 33 ............................ GATGCTGCCCCTCCCACACACACGCGGGAGGGA 230017 28 100.0 33 ............................ GGCTAGAGGGCGCGCCATCCGGCCCGTAGTGTG 230078 28 100.0 33 ............................ GCGATCGAGGCCGTGGGGACCGGCTCGTACTGG 230139 28 100.0 33 ............................ CATTCATGCGATAGGCGTAGAGGGCGATGCCTT 230200 28 100.0 33 ............................ GTGGGATAGAGGCGCGATCGGTCCGGACGATAT 230261 28 100.0 33 ............................ CCGTGAGCGGCTGGGCGTGAAGCCCGATGCGGA 230322 28 100.0 33 ............................ GCTTACGCTTGAGATAGATGGGCCTCCAAGGAA 230383 28 100.0 33 ............................ TAGCTAGATCGTCGATAGGAATACCTGCGGTGT 230444 28 100.0 33 ............................ GAGCAAGCCCAAGAGATTCAAGCGCGTGTTTTT 230505 28 100.0 33 ............................ CTGCCCGATAGCGACGGCCGTAGATCAGTGGGG 230566 28 100.0 33 ............................ TGTGGAGCACCGGCTAGGGGGCGGGGATGATGC 230627 28 100.0 33 ............................ TCCCGAGCCATCTTGAGGGTGCAAGATGGCCGG 230688 28 100.0 33 ............................ CTGGGCATGCAATGTGTGCTATTTTCCCAGCTA 230749 28 100.0 33 ............................ CTCGACTATGAGGAATACGAATACGGCTTCCTG 230810 28 100.0 33 ............................ TTTCGACATGGACGCGTTCCGCCGCCGTGTCGA 230871 28 100.0 34 ............................ ATGCGCCATAGACCGCGTCGGCGTTTTCCTCGAC 230933 28 100.0 33 ............................ GTCCCTGAGCTGCTCTTTTGTCCCCTTGAAGGC 230994 28 100.0 33 ............................ CAGCCTTAGCCATCTGCGCCGCACCATCCGCGC 231055 28 100.0 33 ............................ GCCCGGATTGCCGGGAATACCGGTCTCTTCGCC 231116 28 100.0 33 ............................ TCAGGTGTACGACCAGTTTTCCGGACAGCTCAG 231177 28 100.0 33 ............................ GGAAGTGGTGAACGATGGCGCAGGTATATCGCG 231238 28 100.0 32 ............................ CCATCGCCAGCATGAGCTACGAGTACGCGGTA 231298 28 92.9 33 CG.......................... CTACTCGCCACAAGCCTCGCCGAAAAAGGACAC 231359 28 100.0 33 ............................ TGTGGATACCCTCTGGGGCGCCGTCCACGTCGA 231420 28 100.0 33 ............................ GTCTGACCTGAACAAAGATGACTTTCAGAAGAA 231481 28 100.0 33 ............................ CGTTGCTCGCAGCGGATGCAAACCCTCTATTGG 231542 28 100.0 33 ............................ TTGTGCGGCGACGGCCTGCGATTCGACCGCATA 231603 28 100.0 33 ............................ GAACTATCGAAAAAGGTCCAGCAGGCCGAAGAT 231664 28 92.9 0 ..........................TG | ========== ====== ====== ====== ============================ ================================== ================== 34 28 99.6 33 GTTTTTCCCGCACGCGCGGGAGTGGACC # Left flank : TTTTAGATGGCGGTAAGACAGAGCTATCTGGAGGGTGGCTTGCCGCCAATGGCATCGTATTCAAACGTATCCAGGACGCCCCGCCTGTCAGCGTTGAGATGATGCTTCACGCTAGTAAAGGATGGCAGACCTCCCCAGAGCTTGGAGCATCTGACCATATTCTCGACCGGCTCTCGGATACAGCGCCCGACACGGTAAGAGTAGAAGAATACTTACCTATTGCCGTGGGCATAGCCGTGTCAGGGCGTCCCTTGGCCCAACACGGAGTGGCGCATCTCAAAGGCCGAAAGAGGTTTCTTCCGCGCCCGACATATCCAGTAAGTTTATGGACTCTAGAGGTTCTATCGAGGAGACACCGTGGTTCTGGTCTGTTGGCGGAGGAGGTGACGCGCGGGAAATTTAAGACTGTTGCTCCACCGATCGTAGTTTAGTTCGTTCAAGGCGAATAGAAGTTGAATCTATACGCCGTGTTTGCTCGCTAAACCTGCTGTTCGCAGAGT # Right flank : GCAAGCTCCTGTGTTTACCTAGCAATCCAGTCGAGTTTGCCGAGGTCACCAAAAAATGTGACCCATTGTGGAGCGTGAGGGGCATCGCAGCGCTATGTGTCCATCTGTCACGATTGTGATCAGCTGTCACCTCGTTGAAAGCATGCATGAAGCATCGTTTCCTGAAGCGGTTGTGCCTTGGCAGCGGTGCTGATTTGTCCGCTGTAGCTTGTGCGCCTGTGACAGGAATCGGTTGCTGGGCACTGAAGACTCTTTCTTACTGTGGTCGGGATGCATATGGGCGCCATCAATTACCGACCTAGATCTGAATACCACTTATCTAGCGATGTCCCGATCCAGTTGAGTAGTTTTTCCAGAGCGTCTTAGGTGGAAACTTGACCGCTCCTGCGTTAACGAGTCCGTGGTCGTAGTGATACTTCGTTTGCGCTTCAGCCTTGAGTGCGGCGGGTGCCGTTTTCAGAAGTACTCGAATGGGCGGTAGAAGACATAGATGCGGCTCT # Questionable array : NO Score: 3.24 # Score Detail : 1:0, 2:0, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTCCCGCACGCGCGGGAGTGGACC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-11.00,-10.90] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.37 Confidence: LOW] # Array family : NA //