Array 1 3902-3500 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_REFG01000015.1 Petrotoga olearia strain DSM 13574 Ga0215639_115, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence               	Spacer_Sequence                                          	Insertion/Deletion
==========	======	======	======	==============================	=========================================================	==================
      3901	    30	  96.7	    36	.................A............	TTGTCTTTTAGCCATACAGCTACATTTCCAGTAATT                     	
      3835	    30	  96.7	    36	...................A..........	ATTCTATCTTTAAATTTATTATAACTCTTCTCAAAA                     	
      3769	    30	 100.0	    37	..............................	CTTTTCTAGAATGCTGTCAACAAGTTCAGCCAAGTCG                    	
      3702	    30	  86.7	    56	.................A.........GGG	TAGGTGGAGGAATGGAAACATCGACGTTTTAACTCACCTCGATATTTGTAGTACGT 	
      3616	    30	  90.0	    57	...........................GTG	TGGGTGGAGGAATGGAAACGCTGAAGACATAGCAACTGAAGGGCATGAAGAAGTATA	
      3529	    30	  90.0	     0	...........................GGT	|                                                        	
==========	======	======	======	==============================	=========================================================	==================
         6	    30	  93.3	    45	CTTTTTATCCTACCTATGAGGAATGGAAAC	                                                         	       

# Left flank :   CAGGCTGTGTCACCTGTACAACATGTGGATGGTCAAAGTGTTCTTAAATAATATACAATAAGAAACAATACTAGAATTTGGTTTTGAAATAGGTGATATAGCTTTATTAAAAATTGATGGAACAAGCGTTATTGTTCCTTTTGTTACAACTTATGGTTATGTCGACAGAGGCAATCCCATTGTTGCAATAACTTTATAGCCCGCCTTCATGGCGGTTTTTTTGGTTTTATTATTTTTTTTGTTCACAGTTTAGATAAGTTGAACCGACTTAATATAAAATAATGTTAACAAGTTAACCTAATAATAACGTAGAAAAGAAAATGATGAAAAAAACCGTCTGTCGACCTCCAATAGGGTAAAAAACCCGGGGGATCGACAGACAAGCGAAAAAAGTCACAAGCCCTATTACATGCGCTTTTGAATTGAATCTTAACAAATTCTCAAAGTTTTGCTTGACAATCGTAATTTTTTATGATATAGTATTTATAAGTATCTTATGC
# Right flank :  AGGGGAGGGGAATGGAAACGAGATTGCTTCAAAGCTTCGATGCAGTATGTTCTCGCTTTAAAAGGATTTTGATGAATTGAAGGCTGGGAAGGAATGGAAATAATAGAATCTTTAGGCTTCGACATGTTAAACCTTAAATTTTTAACTAAACTTTTATGAATGAAACCCAGTAAAGAAAACATGGCCTGGTAACTTAGGGGGAGATTTTTTAATTTCTTTTGCCCTTAATAATGCAAGATATAGTAAGATTAAAAACGAGCTAGTATTCCAGCTTTATAAACTTCCATAAAATGCTTTCTGATTTTTAAACAAACCTTAATAAAAGAAAGAAATGAAAACTTCTAGCTGAATTCTTTTGAAAACCATTACCTTATAACCTTTTTACTCTACCTATGAGGAATGGAGGGTGGGGTAGAGCAATGGAAACAATTTTATTTCTAAGTTTCCAAGTAGTGTTCTCTAACCTTTAAATCATAATTTTATGAATGAAAGAAAGCAAA

# Questionable array : NO	 Score: 3.41
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.67, 5:-1.5, 6:0.25, 7:-0.42, 8:1, 9:0.41,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTTTTTATCCTACCTATGAGGAATGGAAAC
# Alternate repeat :   CTTTTTATCCTACCTATAAGGAATGGA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:62.96%AT]
# 	Reference repeat match prediction:         R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 96% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-1.90,-2.40] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-2] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [50.0-76.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.41,5.14   Confidence: HIGH] 

# Array family : I-B [Matched known repeat from this family],   
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