Array 1 108186-107708 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJOG010000050.1 Coleofasciculus sp. FACHB-T130 contig50, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 108185 37 100.0 37 ..................................... TAATTGTCCTTCGAGGCGGCTGATAAGCACATCAGAT 108111 37 100.0 35 ..................................... CCACATGAAACAACTTTCTTTTCTGCAAGATTCAA 108039 37 100.0 37 ..................................... TTGGCGAAATTACGAAACAAACTTCGTCATCAGAAAG 107965 37 100.0 37 ..................................... CTGGACTGCTTGGAATTTGCCTACAGATACGAACTGT 107891 37 100.0 38 ..................................... GTTGCTGCTGCTTTCTTCTTAGAGGTTGCCATCGTCGT 107816 36 94.6 36 ............-.....................C.. GAAGGTATGACAAAATCATAGTTACTACAAAAGGGA 107744 37 67.6 0 ...G......G.....TCTAG.A.A.A.A.......A | ========== ====== ====== ====== ===================================== ====================================== ================== 7 37 94.6 37 GTTTCATCAACCCTCCCGCCTTGGGGTGGGTTGAAAG # Left flank : GGGTTTGTTTGACTGTCGGAAGACAGTCCTACTTTCTGAACCCTGGTAGCTACCCGCCCATGATGCTGCCCCTATGAATACCTTCTTCATAGGTCGGGAAATTCCCGTGTATGAATACTGGAGTATATATTATACAGGAAAGGTGCGCTCCCAGCAAAATGAGGTGAGGCTGAAGGAGAAGGTAAATTTTCCCAAAGCCCTAGCCCTTGTTAACAAAGGTGCAGATTACTCACCGTTGTTAATAAGGGTGCGGATTACCGCAGTGGTGGCTCCGAACTCGTCCCCTTCGGGGGAGCCCTCCCTAATTTTTTTCTGACGGCTGAAAGTGGGGTCAAAATCCTTGAGTAGCCGTCAGAAGTTCAAAACTCCTGTCCAGTCTTGATTTTAGACGTTCACGGCAGTAATCCTTCTCTTTGGGAAAGAGCTGAAATGAGCAATTTAAAATCAGCCGACAAAAATGTATTTGTCAGCTTGTTTAGACAAGGGTTCCATCGGGCGCG # Right flank : GCCTATTTAGAAACTATGATCTAGAATCACCACAAATTTAACAATGGGAGGGTTGAAAGGAGCGCTGCGATCGCACAAACCGACTGTTCACAATCAACAACGACAATAATTTGCGAACAGATGCTCAAGGGGGGAAAGCGACATCAAACTGCCAATAACGACATGATTGTGCGAAAAACGACATTAATCTGCAAATCGCGACATTTAATTTGCGAACGTACATCAATCGACACTTGCTAATGTTAATGGAGAATAGGGAACTCGAATCCCTGACCTCTGCGGTGCGATCGCAGCGCTCTACCAACTGAGCTAATTCCCCAAGCTGTGAGCTAATAGCCATAAGCTATGAGCTATTGAACTTCAATATTCTAAAATATTCTAACATCCAGCCAGAAACAACTAACTATCGCGTTATCCGTACAGAGTCAGTGGTTTATCCGATCGTTGGCTGGGGTGTACTTCGAGAATAGACTTGTTCCACCCGCTCTAATTCTAAGTCA # Questionable array : NO Score: 2.99 # Score Detail : 1:0, 2:0, 3:0, 4:0.73, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCATCAACCCTCCCGCCTTGGGGTGGGTTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-11.40,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [63.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,0.78 Confidence: MEDIUM] # Array family : NA // Array 2 139510-138959 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJOG010000050.1 Coleofasciculus sp. FACHB-T130 contig50, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 139509 37 100.0 37 ..................................... GTCAATGGGGGCTTGGTGGGTTCGTCTGCTGGCAGAA 139435 37 100.0 36 ..................................... TTCTATTGCCCCATCAAAATAGCCGTCAATGTATTT 139362 37 100.0 34 ..................................... AAATTATGGGCTTGCGCTGCCTCAATGACTGGAG 139291 37 100.0 35 ..................................... TTAAGAAAGAACCGAGCGCACCCCCTGAAGCCAAA 139219 37 100.0 40 ..................................... ACACTTGCGGACGGGAGCGATCTAGCTTACGTGTTGGTGA 139142 37 100.0 37 ..................................... TCTGTATTCGCCAGGGTACTGCTTGCGAAGATGAGCG 139068 37 100.0 36 ..................................... AGCGGGTACTTCGTGGGCAGCAGCGACAACGTTTTC 138995 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 8 37 100.0 37 GTTTCAACGACCATCCCAACTAGGGGTGGGTTGAAAG # Left flank : AAATAATCAATAGCGCCACAGGTCATGTTCCTTGGAACCTCTGATGTTCCTTGGAACCTCTGAACTGTGAAAAGTATGGGTTAGTTTGACTGTTGGAAGACAGTTGTGCTTTCTGACCCTGGTAGCTGTCCACCCCGATGCTGATATCTATAGTTCCGGCTGTAGAAATGATTAACCTGTAAGTTGAGGTTCATTGATACTTCAATCTTATGGGGTAGGTGCGCCCCCAGCAACAAGGATGTGGGTTTACTACAGTGATAGCTACTGAATCACCTCCGAGCAAGGGGGAATCCACCCTAATTTTTTATTTTTCGTGAACCTAAGCGGGGGCAAAATTCCTGGGAGGTTTACGAAAACTGTGAATCCCTTATGGAATATTGATTCCAGTATTTCTGTGGGATGGTTGCTCCTGTAGATACAGGACAGATAAAGCGAAAATTTTAGAGGGTTACGAAAGTCGCCTCTAAAAGCTCCTCCAGGTAACTGTTGTAGCGATCGCT # Right flank : TAGATGTACAGAAAGGAATTTATTAAGGTGGGTTGAAAGGAGCGCTGCGATCGTACAAACAAAGTACAGAATGTTGTATGTCACAAACATTGGACAACAATTATTTTGTCAAAACGTCAAATAATTTGACAAGACGACACTAATTTGGCAACGATGACAAATAATTAGTCAATTGTACGTTCGCAAATTAAATGTCGCAATTTTTGAATAACGGCATAGCTGCTACAAACCAGTGAAAGCCTTTCCCCGAAAACTTTTTAGGCTTTTTAATTCCAAAAGCAGCAACTTTGTCGATTTCGCACACTCCATGTCGGAAATCTTGTCTCGCAAATTAATTGTCGTTTTTTAAATTTAGCGACATCGCAAATTGAGTGTCGCATTGTCTAGCTATTCTTCAGAAGGGATGGTACATTTTTACTATTCCTCAGAATGGATGATCTTCCCCTCATGCTAGACGACCCATCTGAACTGATAGAAGAATTGGCACAAGATTTAGACAC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAACGACCATCCCAACTAGGGGTGGGTTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [8,10] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-8.20,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.74 Confidence: HIGH] # Array family : NA // Array 1 94185-94575 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJOG010000056.1 Coleofasciculus sp. FACHB-T130 contig56, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ================================================== ================== 94185 24 83.3 49 .GTAC................... TTATAAAGCTCTTCTGTTGCCTTAGCACTTTCCTTGGTTTCAACGACCA 94258 24 100.0 48 ........................ TCATCAAAGAAGTTCGCCAAGTTCAAAAAGGCGAAGTTTCAACGACCA 94330 24 100.0 50 ........................ ACACCGAGTTAAAATGCCACTCCTCGCCCACACTCGAGTTTCAACGACCA 94404 24 95.8 50 ...............C........ TCTAAAGTGCCTTGGGTATAGGCAAGCTTTTCTTCTAGTTTCAACGACCA 94478 24 83.3 49 ..A..C..........GC...... GATGGTACAGTTGCGGGTTGGCAGCAACAGCCAGAAGTTTCAACGACCA 94551 24 87.5 0 .....C..........G......T | T [94572] ========== ====== ====== ====== ======================== ================================================== ================== 6 24 91.7 49 TCCCAACTAGGGGTGGTTTGAAAG # Left flank : GACGCCTCAAGACATCCTGCTGGGATTGCTGGTGCTATTTGCCCTGATGGGATTACAGATCGTCCTATCGCCGACTCGGTGGCCCGCAGCGGTGGGAACAGCCGCCGCAGGATGCGCGATCGCGTTTTTAACAGGAGTCTGGTTTCACCGCCAGCTAGGCGGTCATACCGGCGATACCTACGGGGCAGTTGTAGAGTGGACAGAAGCTTTGTTATTGTGCGCGATCGCTAGCCTCTACTCTCACTTTTCGGGCTAAGTTCTCTGTCGCAAGTTGCCAAGCCTTACATAGAAATTCCAATTTCAGCCAACGGCGTCAGAAAACTTGAATCCCAATTGAGGTTTTTTTCGATATTCCAAGTCGCCTTGTAAAAATGCCTGCCACTGCCTCAACTGCCCAAGCCACTGCGAATCATTTCGGCAAATTGGATGATTTAGCCTTAACGACATCCCTAATTGTCAAAGCGACATTCATCTATCAACGACGACAATTAATGAGTCAC # Right flank : TTTTTAATGCAACCATTCCTCTTCCTACTCATGGTTTTAACAACTATACTTAACAAAACTTACAAGTGCTAGAGTGGATTGAAAGGAACGTCAGCTTCCCAATCTGGCATTTTTTTGTTCAGGTGTTTTTATGCATCAAGACGACACTAATTTGTCACTACTACTTTAGCGACATTAATTTGTCACAACGACACACAATTAGTCACAACGACAGCAATCTGTCACTGATGACAATTAATTAGTCACTGTACAAGAAAAGCGGGTAATCGGACTCGAACCGACGACATTCACCTTGGGAAGGTGACGTTCTACCACTGAACTATACCCGCATTTTGAGGTTAACGATCAGCAGTCTACTGATGGTTAACTTTTATTATACGACCGATCGAGCGCCAGCATCCAGTAATTGGAAAACTGGCGCGATACATCTTAACGTTGAGTCGCGATTATGGAGCCTTGACTAGATAAGGTGAAGAAATCGCCTCAGCACGACCGGCATT # Questionable array : NO Score: 5.38 # Score Detail : 1:0, 2:3, 3:0, 4:0.59, 5:0, 6:0.25, 7:-0.15, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCCCAACTAGGGGTGGTTTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [6,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.80,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [4-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [60.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0.27 Confidence: LOW] # Array family : NA //