Array 1 68389-63376 **** Predicted by CRISPRDetect 2.4 *** >NZ_VHEJ01000020.1 Acinetobacter baumannii strain MRSN7067 MRSN7067_contig00020, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =============================== ================== 68388 30 96.7 31 ............................C. TTAAAATAATTTTCCCCCACTAAGATACTAC 68327 30 93.3 30 ............................AA ACATCTTTATTGAAGCTCTTGCTGTATCTG 68267 30 96.7 30 ............................A. TATACCTAGCATCCCCTTTGAGTTCTTCTG 68207 30 96.7 30 .............................G ATTTAAAAGGAGCCAGCCATGAGTGAGTTT 68147 30 93.3 30 ............................AG AGGGGGTACGCAGATTGTGCGTACCCTTTT 68087 30 93.3 30 ............................CC ATTGCAAAGCCATTGCATCTGCAATGCCTT 68027 30 100.0 30 .............................. AAAGTTAAGTCCATTTTGTTCAGTAACAAT 67967 30 93.3 30 ............................AA GAACCTGTATTTGATCCTGATACGCCATTG 67907 30 93.3 30 ............................GA CACACAACCCAAAAGATTGGCACGTTCAAG 67847 30 100.0 30 .............................. TCATCAGTAGCAGAGTTAGACCCTTCAATC 67787 30 100.0 30 .............................. GCCGCGTGGGTAATGAACTGCTTTTTGTAC 67727 30 100.0 30 .............................. GAAGATGAGCTAACAAATCAACGCCAACTT 67667 30 93.3 30 ............................AG TTGCACTCAATGGTTGTGAGTCCGCCATGT 67607 30 93.3 30 ............................GG TTATTGATCCAGCCATAAAAGAATTGCTCT 67547 30 93.3 30 ............................GC ATAAAAGTACAAACTAGGGTCAATGATGTA 67487 30 93.3 30 ............................AA AGGATTCTTGCTCAAACGCCGAGGTTATAA 67427 30 93.3 30 ............................AA TTGCTGTGACCGAGCCAAAGCGGAAATAAA 67367 30 96.7 30 .............................G CTTAACTGTTCTGTCACTCAATTGGCAGAA 67307 30 93.3 30 ............................AG TTGCACTCAATGGTTGTGAGTCCGCCATGT 67247 30 96.7 30 ............................G. TATGAAGTTGACGGTCTTGTCTCGCCTGAA 67187 30 96.7 30 ............................A. CTGGTAACCGTTTCGGTGATACCACTTGGA 67127 30 96.7 30 .............................G AGAAGCCGAAAGCAACACGAGCACATTGAA 67067 30 93.3 30 ............................CA AAAGTATTGCCGCAATGCCTTCTCAAATAC 67007 30 100.0 30 .............................. AAGTGCATCGATCGCATCCGCACCGCTAAT 66947 30 93.3 30 ............................AA GAATAAACGCATTTTAGATGGTATTGAAGG 66887 30 90.0 30 ......A.....................AA TGCGCCTCAGCTATCACAAAAGTCGAGCAA 66827 30 93.3 30 ............................GC AAGGCGACTGCAAAAAATACTTCTGGACTA 66767 30 93.3 30 ............................AC AAATTGATTATACATTAGCCAAATTGTAAA 66707 30 93.3 30 ............................AG AAGAAATGCAAGGCCGCAATCTGTCATTCA 66647 30 100.0 30 .............................. TTGAAAGGTAAAGAGCCTAAAAATCTTACA 66587 30 96.7 30 ............................A. GGATTAAAGACTGCTGAAACAAGAGCAGCT 66527 30 96.7 30 ............................A. GAGTGAGTTTAAAGAGTTCAAAGTTGGTGA 66467 30 93.3 30 ............................AA GAATTGTCTGCTGAAGACATTGAAGGAATT 66407 30 96.7 30 .............................G TTGCGCTGTTTTTGAACGTGTAATTGGATA 66347 30 93.3 30 ............................CC AAAGCGGTTAAGCCTCCAAGATTTGCATAC 66287 30 96.7 30 ............................A. GGTAATACAATTCAATCTCACTACAAGAAT 66227 30 96.7 30 ............................A. ATATTTTACGTGTTGATTCAACTACGGGTG 66167 30 100.0 30 .............................. TGGGGTAACTGGTGCCTTTAAGTTGTTTTG 66107 30 100.0 30 .............................. CCAAAGTCTTGTTCAATATCTTGTTGTTGA 66047 30 100.0 30 .............................. GCTCATCAATACAGCTACAAGAAAATTTGT 65987 30 93.3 30 ............................AG CATAAGCATAAAAATTATGTGTGAATATCA 65927 30 93.3 30 ............................AA TATGCAACAATAGGAAATTGCTCAGCATCT 65867 30 93.3 30 ............................AG TTACATCATTGCTTTTAGTCTTTTCTATCT 65807 30 96.7 30 ............................A. GGGCCGCAACCATACGGTCTATGACTTCCA 65747 30 96.7 30 .............................C ATGATCATAGCCCTTATAGATATCGTATTT 65687 30 96.7 30 ............................C. GCGAAAGCGGGGTTTTTTATTGCCTGAAAT 65627 30 93.3 30 ............................GC ATAGGCATTTACTCCCGCTGTGAGTGAAGG 65567 30 96.7 30 ............................A. CTGCAAGACCACTGATAGTTGTTGAGAATC 65507 30 96.7 30 .............................G TGGCGTAGCGTTTCCAAAGTTGCCCATTGG 65447 30 93.3 30 ............................CC AAGCGTGACCAACTCACCAGTTGTCACAGG 65387 30 100.0 30 .............................. TTGAAACTTATAGGCTTGGCTTGGGTTATC 65327 30 96.7 30 .............................G AAAGGGATTTAAAAGCAGTTACATAAAATT 65267 30 96.7 30 .............................G AATTGGATTTCGTAAATCATTGAGCAAGTT 65207 30 93.3 30 ............................AG CATCAAGTAGATCAGCAGTTACCTGTTCAG 65147 30 100.0 30 .............................. CTGTATTAGTGGCCTTCATGTGCATTAAAA 65087 30 96.7 30 ............................A. ACATGCCCACGTTGAAAATCGGGTACCAGT 65027 30 96.7 30 ............................G. ATTAAAACTGCTTATAAACTTTCTTAAATC 64967 30 96.7 30 ............................A. TTTTTCTGTTAACTCTAAAATACCCTTCCG 64907 30 96.7 30 .............................A AAAGTAGAGAGTGGCGGTGATTCACTAAGA 64847 30 96.7 30 ............................G. TGTCTGATCCGACAATTTGGCTGAGTACGT 64787 30 100.0 30 .............................. GTACAACAATATGACCCGTATCGATGTAAC 64727 30 93.3 30 ............................AA CAATTGCCTGAGTGGTATGAGCCACCAGTA 64667 30 100.0 30 .............................. TGATAGCTAAAGTAGAAATCAAAGTCGCAA 64607 30 100.0 30 .............................. TTATTGCTGGGAATGAAACATCAAAGCAAA 64547 30 100.0 30 .............................. CTCATCGTGAAGGTTTTGCAAATATGCCTT 64487 30 96.7 30 .............................G TCCGAAATTCAGATGGTGAAGTGACATATG 64427 30 100.0 30 .............................. CAACCTACGCAAGTATTATGGGAACTATTT 64367 30 96.7 31 ............................G. CTTTATCAGTTACGATGGCATGAGTTTTTGT 64306 30 96.7 30 ............................A. ATCTCGCAGATTTGGACAAGGTCACGAATA 64246 30 100.0 30 .............................. CAACTGTGTAACCAGATTTCGCTTTAAAAG 64186 30 96.7 30 ............................A. CAATGTAATGCTCAGGCGATGCCTTATCAT 64126 30 100.0 30 .............................. GGACAAAGATTATGACTGAGAAAGACGAGA 64066 30 93.3 30 ............................CA ACTAAAAGCTATTTATGGGGGTAAAAATTT 64006 30 96.7 30 .............................G TCATTGGCCGGCCATTCACAACCCCGATAA 63946 30 93.3 31 ............................CC AAAAAATGAGGAAATTGGACAATATCCAACA 63885 30 96.7 30 .............................G TTGAACGAGTTATTCATAAGTGCCCGAAAT 63825 30 93.3 30 ............................AG CGGAAATCTTTTCAAGTGCGTAGGGGATAA 63765 30 100.0 30 .............................. CTCCAAGTAAAGAATAAAACAATATACCGC 63705 30 96.7 30 .............................C AAGGCGATCCACCTCCCGTCACAGTCATTT 63645 30 93.3 30 ...........T.C................ TGCTAAAAGGATTTATGCTTTAAAATACTT 63585 30 86.7 30 .......A.....C...T..........G. TGGCGTACGGATAACGGAAGAAAGCATAAG 63525 30 86.7 30 .......A.........T..........AA ATAACCACGGTTGTGGTAAGTCACTTTTAC 63465 30 80.0 30 .......A.A.....T.T..........GC GTTCAGGTTGAGGAGATGAAGTGATGTGAT 63405 30 70.0 0 ...T...A...T.....T..C...AGCG.. | ========== ====== ====== ====== ============================== =============================== ================== 84 30 95.4 30 GTTCATGGCGGCATACGCCATTTAGAAATT # Left flank : GGCAAATGGCTAGAACGATTCATTGATTATGTACATATCACTCAACCGAGAGAAGTGCCTCGAGCCAAGATTACAGGTTATGCGCATTACTATCGAGTTAATCATAGAATGAGTGTTGAGGAACGTATAGTTCATCAAGCACAACGTCGTAATATTTCTTTGGATCAGGCTAGACAGCATTTTAAACAATATGTTGAGCAACCAGTGGTTGAACCATACGTAAGTTTAAAAAGTCTCAGTGCAAAACGTGAGGAAAATGTAGATCGCCCCTATCGTTTATATATTGGTAAATCACTTGTTGATGAGGCAAGGGATGGGATGTTTGGAACTTATGGACTAAGCCGAATGACAACAGTCCCAGAGTTTTGACCCAATATTTTTTCTATTCTTTAACAGCTCAATAAAATCAATAAGTTACAATAGGTCTTTTTTGATTGGGTAAAATGCCAAAATCCATGATAAACACTTGTTGTAACTTATATTTTTACTATAATTTTATA # Right flank : AAGATAAAAAAACAAATGATCACTGCTTAGTATTCTTTATCTTTAAATTTTAAAGAAGAAAATATATTCTGAGCTCAAGATATTTAGTGGTGAAATTTTTATGCGCGGTTTATACCTCATTACCAATGATGACCCAATCCAATTATTATTAGAAAAATTAGACGCCGCACTCGCAACCCGTCAAATCGCAATTTTACAGTACCGCCGTAAAAAAGTAGACAAAGCCGACCAACCTGCTGAAGTTGAACAGATCAAACAATTATGTGAAAAATATCAGGTTCCTTTTGTCATTAATGATGACCTAAAACTGGCTGCTCAGTTTGGTTTAGGTGTGCATTTAGGTCAAAGCGATGGCGAAATCACCGATGCAAAATCGCAGTTACCAGAAGGTGTTATTATTGGCCGTACTTGCTTAAACTCATTAGAACTTGCCCAAAAAGCTATTGCCGATGGTGCAACTTATGTTGCCTTTGGTGCGGTTTATGCAACTGCCACTAAAC # Questionable array : NO Score: 5.30 # Score Detail : 1:0, 2:3, 3:0, 4:0.77, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.27, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGGCATACGCCATTTAGAAATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCATGGCGGCATACGCCATTTAGAAATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.60,-8.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [20-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [80.0-80.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //