Array 1 226569-229035 **** Predicted by CRISPRDetect 2.4 *** >NZ_VUBY01000001.1 Klebsiella pneumoniae strain 186J4 contig_0002, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 226569 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 226630 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 226691 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 226752 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 226814 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 226875 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 226936 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 226997 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 227058 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 227119 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 227180 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 227241 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 227302 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 227363 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 227424 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 227485 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 227546 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 227607 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 227668 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 227729 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 227790 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 227851 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 227912 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 227973 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 228034 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 228095 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 228156 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 228217 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 228278 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 228339 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 228400 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 228461 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 228522 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 228583 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 228644 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 228705 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 228766 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 228827 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 228888 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 228949 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 229007 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 41 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //