Array 1 90951-94646 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG667031.1 Corynebacterium glucuronolyticum ATCC 51866 SCAFFOLD1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================================================================================== ================== 90951 29 100.0 32 ............................. AAGAATCCATCAAACAAAACGGCCAATATCGC 91012 29 100.0 32 ............................. GCGTCGATGAGGTAGCCGTTTCTTGGTGTGCC 91073 29 100.0 32 ............................. AAGGAGAAGAAATGAGCGGCTACAAGCACTGG 91134 29 100.0 32 ............................. GAGTCCGAATCCTGGGACTGGTCGACACCAGA 91195 29 100.0 32 ............................. GGCGTTCATGAGGACGGCGCGATCCAGTTTGT 91256 29 100.0 32 ............................. GACCCCTATAGCCCCGAAGGGCAAAAGTGGGA 91317 29 100.0 32 ............................. GTTATTCAACGGCAGGATGGTGAAGGAATCAA 91378 29 100.0 32 ............................. ACGGAGCGCACGCCAACATTGGGACCAACCAT 91439 29 100.0 32 ............................. GAGATCATCGAAGCAGCCAATGGCAACACAGT 91500 29 100.0 32 ............................. TGGAATTCCACCCCAGCGATGAAGGCTACGAC 91561 29 100.0 32 ............................. GCGTGGAGCCGCGTGGAGGTGGGTCATAGACC 91622 29 100.0 32 ............................. ACACTATATGCACTTTAGTGATTTTGGAATTT 91683 29 100.0 32 ............................. AGTGGTAGTAGTGATGCCACCGCCGACACGAG 91744 29 100.0 32 ............................. ACGAACACGCCCATTGCGCGGCTCACGCTCAG 91805 29 100.0 32 ............................. AAATCATCTTCGGAGAAATAACCCTCGGCTGC 91866 29 100.0 32 ............................. CAGGTCGTCAAGGGTGAGGATTTCGTCCATGG 91927 29 96.6 32 ......................C...... CGGGGGTAATTTAATGTAACCCTATATTGCAT 91988 29 100.0 33 ............................. AAGTACACGGGCAACAAGGTTATTCTTTCCTCA 92050 29 100.0 32 ............................. GAATGATCTCCACATCCTCAGTCGGCTTATCA 92111 29 100.0 32 ............................. CAGCATCATCCACGTAAACAGATTCCTTGCGG 92172 29 96.6 32 ............................T TAGCCGATTCCGAGAGGAAAACCTTGATTAGT 92233 29 96.6 32 ...........A................. TTCCCCTCAGACTCCGGGGCCGGAGTATCCTC 92294 29 100.0 32 ............................. ATTGCAACCCCGCCCGGCTCCTGTGAGCTGAA 92355 29 100.0 32 ............................. TGGTGAGGCGCTGGGTGCAGCTGGTGAGGTCG 92416 29 100.0 32 ............................. CACATGTCAGAGTTAATCCCCCTGACGAACCA 92477 29 100.0 32 ............................. GCCACATGGGCATAAAAATCGGTGACGGTTTG 92538 29 100.0 32 ............................. GTTGTGTGTGATCCCGTTTTCAACCCTTTTAA 92599 29 100.0 32 ............................. CAGGCGCAAAGCCTTGATACTCTCATGGCTTG 92660 29 100.0 32 ............................. CTTGATGGGTTGGAGCTGAGTATCCGCAAGAA 92721 29 100.0 32 ............................. ATAGTCCAAACTGTTTATGAGTGCTCGGGCTT 92782 29 100.0 32 ............................. CAGGGGGTGGTGAGCCACACCATGATGTGGCC 92843 29 93.1 32 ............TG............... GGTCACGTCTCGGTTAATAAAACGCCGAAGGT 92904 29 100.0 32 ............................. GTGTGCTTCGCCAGATCGCAATTATTGCTGGT 92965 29 100.0 32 ............................. GCGCTCAGCTTTGAAACTTGGCGGTGCTTGTC 93026 29 100.0 32 ............................. CCTCAAAAAGATTGACGGGAAGGAGTACCAAT 93087 29 100.0 32 ............................. GCAGAGCAATATGAAAATCTGGTCTTCAACGG 93148 29 100.0 32 ............................. GGTTATCATGCTTACATTTCTCGGGAGTTTGA 93209 29 96.6 32 ............................T CATGCGTGTCACAGCCGAACAGGAAGGCAGCG 93270 29 100.0 32 ............................. ACCATTAAACCCAATGACCTAGTACGCCTAGC 93331 29 100.0 32 ............................. GCCACATGGGCATAAAAATCGGTGACGGTTTG 93392 29 100.0 32 ............................. GAAGCTTGGTAGCCAGGGCATTAGCTTGTCTT 93453 29 100.0 32 ............................. TACTCGGGGTGGCCACGACCCAACGGGCATCC 93514 29 96.6 33 ............................A CGGAATCCCCGGAAAAGACGGGACCCGCCTCAC 93576 29 100.0 32 ............................. GATTAGCCCGTGTTCCATCGTCGATTCTCATG 93637 29 100.0 32 ............................. TTCGGCGCGCGGACACCCAGGCCTCGGAAATG 93698 29 100.0 32 ............................. GAGCATCAACTGCGTCGAGGAGGTAGATTCGT 93759 29 100.0 32 ............................. CCTGCGGAGCTCGTCCATCCAATCCATGCCAC 93820 29 96.6 33 ............................A CGGAATCCCCGGAAAAGACGGGACCCGCCTCAC 93882 29 100.0 32 ............................. GATTAGCCCGTGTTCCATCGTCGATTCTCATG 93943 29 100.0 32 ............................. AAAGGGAACACGGGAGGAGTTCGAGGGTAACA 94004 29 100.0 32 ............................. CAGGCTCACCGACGCGGAGTTGGACGCGTTGC 94065 29 100.0 32 ............................. ATTGAGGACCTGGAGAACAAGATTGAGCAGGG 94126 29 100.0 32 ............................. GGCCCTTCGGCTCCCCAGGAAGGTAGGCATGG 94187 29 100.0 32 ............................. TATATCCACAGCTGGAGATCAGCAGGCTAGGC 94248 29 100.0 32 ............................. GAACTCGCAGCCATTAAAACCGGCGACAGTGA 94309 29 100.0 32 ............................. GACTTTTTTCGCCAGGTCGATGCTTCACAGGC 94370 29 96.6 32 ..........T.................. TTGGCGGGTGCCCTTGGATCGCCCGATAGCGG 94431 29 93.1 31 ..........T.................T TATCTTGAGGAGATTCGGTCGGTTGTGCTCG 94491 29 82.8 98 ...........A..C......A..C.C.. TGTCTCTACGGTTCGGCGTAACATCTGCGTGGGGTTCATTCTCCAAATACAGTGGAGGTATTTCTGGCTCTTCCCCACAGATACGGGGTAGATATGGC 94618 28 79.3 0 GAA...........-..........A..T | T [94627] ========== ====== ====== ====== ============================= ================================================================================================== ================== 60 29 98.7 33 CTCTTCTCCGCGCATGCGGAGGTATTTCC # Left flank : TGAGGAGGTGGCTGGCCACACACAGTATGGAAAGAAATAGAAGAGGAAACTCACACGAGTTCGCGCTGCATCAAAAGAGCTCTCCCCCAGGTACAGGCCGTCAATGGTTATTCATCATTTCTCTACACACCCCCACCACCGACGTCTCAGAAAGTTAACCAACCACCATGTTTCTCGTTATCACGTGTTCTGCTGTTCCCGACCACCTGCACGGCTACCTCACTCGTTTCCTCTCTGAGGTTGATACCGGCGTGTACGTCGGCAATGTTTCTCGCCGCGTCCGCAACAACCTGTGGACGCGCTGTGCCACGGCGATCAAATCCGGGAGACTCACGATGATTAACCGCGATCCCGAACGTGAGCAGGGGTTTGCCGTTAACACCCTCGGTTCCCAACGACGTACAATCATTGACATGGATGGCCTCCTCCTTGCCAGCACCTTATTACCCGCGCGGCCGAAAAACCCGCCCCGCAGAAAATAAAGCCCCAGGTGAGGAAGA # Right flank : TCGTTCGTCCTCACAAGAAATTTCGACGGAAGTGAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:-0.08, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTTCTCCGCGCATGCGGAGGTATTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-10.90,-10.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-17] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0.37 Confidence: MEDIUM] # Array family : NA // Array 1 305237-302055 **** Predicted by CRISPRDetect 2.4 *** >NZ_GG667032.1 Corynebacterium glucuronolyticum ATCC 51866 SCAFFOLD2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ======================================== ================== 305236 36 100.0 35 .................................... TCGAAGGTGACGATGCCGCCCTCGGCGAACCGGGG 305165 36 100.0 36 .................................... TCCTCGGGTGTATCCGATCCAGCGACGGTAGCAGTG 305093 36 100.0 36 .................................... ATGATTACGCACACGTTCAAGGACTTGCAGGCGCTG 305021 36 100.0 37 .................................... GGGATCCCCGGCGCGCCCTACGATCCAAGGTCACCAA 304948 36 100.0 37 .................................... ATCAAACGGGCACATCTCACAGAGGCTGAGGCGACAG 304875 36 100.0 38 .................................... CGCCGAAGATCGTCGGGGACTGAGACAGCGGCTTAAAC 304801 36 100.0 38 .................................... ACAGTGATCGTTGTCCCCCCTCGCCCGCAAAACCGCAA 304727 36 100.0 36 .................................... ACCCCCATCGCAACCCTGCTCGAAATCAAAAACCGC 304655 36 100.0 38 .................................... ATGCACGCCCTGGATGATATGATTAAGTAAGCCAAAAG 304581 36 100.0 38 .................................... GCACTAAGGGGCACCACAACCACCACAAACAGTAAACC 304507 36 100.0 38 .................................... GTTTACGAGCGCACAGTGAACCAGGTAGTTGTTGCAGC 304433 36 97.2 36 ........................C........... TCGGGTCGTATGGAGCATGATTTTCAGCTGTCGATG 304361 36 100.0 37 .................................... ACACCGTCGATGCCTGAGTCCCAGTTTGAGGAATTGG 304288 36 100.0 36 .................................... TTAAAACCGTCAACCACACACACCCGCCTTAAACCC 304216 36 100.0 37 .................................... CTTGCCGCGCTCGGGCGATCTAAGGGTACTTGCCAAG 304143 36 100.0 37 .................................... TGAATCAGCGAGCTCTTCGTCATGGAGATTTCGCCGA 304070 36 100.0 36 .................................... GTGTCCTCCTGCCCCTGTTGCTCGTGCTGCGGCTAA 303998 36 100.0 38 .................................... CCAACACTTGCCCCTCGTTGACGGTGTTAAACAGCCGT 303924 36 100.0 37 .................................... CCGGAATGGCAGGCACAGGCCAAAGCCCTGGAGGCCG 303851 36 100.0 38 .................................... AACGGAGAAAAATTCTTCAGGAGCGGAGATTCGAACAA 303777 36 100.0 36 .................................... GGCAATACTACACAGGGCGGTAGGTGACAAACGGAG 303705 36 100.0 37 .................................... AACACACCGGTGAAGCAACTCGCCCCCCTGTTTGGGC 303632 36 100.0 39 .................................... TCTGCAAACGAAGCTCTACATGATGCCGTAAGCGACGCG 303557 36 100.0 37 .................................... GGTGGTATTGAAGCCGGCTTCGAGCAGACCAGTGAAC 303484 36 100.0 37 .................................... TATCCTCCGAACGAACCTCAACCCGTACCACATCCCC 303411 36 100.0 37 .................................... GCGGATTCGATTGCGTCCTTACCGGGGCTACGGCCAC 303338 36 100.0 38 .................................... ACCCCGGAGATGCCCGAGTCGCAGTTTGAGGAATTGGG 303264 36 100.0 39 .................................... ACCATGACTCGTGGATCATATACTCTGTCACACGTACAG 303189 36 100.0 38 .................................... GAAGCAGGTGCCGCCCTCAACGACACCACCATCCGCGA 303115 36 100.0 37 .................................... ATGCGGCTAAGGCAAATCGCACTCGATGGAACCAAAG 303042 36 100.0 37 .................................... GAGGATTTGCGTGCCTGTCTGGTGGCAAAAGGAATGG 302969 36 97.2 37 ..............A..................... GAGGATTTGCGTGCCTGTCTGGTGGCAAAAGGAATGG 302896 36 97.2 35 ..............A..................... CAAACTTCTCTCCAGCTTCATCCCCGTCACACAAG 302825 36 100.0 38 .................................... TGTGAACAACACGCGGCAGACGGGTAAGAAAATTATCC 302751 36 100.0 36 .................................... CATAGGTTTTGCACCGTATCGACGGTGGACATGAAA 302679 36 100.0 37 .................................... GACACGGTAGAATTGCGGCTTCAAATCATTGGTGCCG 302606 36 100.0 38 .................................... TTTGGCGAAGCGGATTCCAACGCTCATGGCGGATGCGC 302532 36 100.0 38 .................................... CTGGATGGTGGTTTCCAGGCAGGGGGCATATTTTTTGG 302458 36 100.0 38 .................................... AGCCCCTTTAAGGCCAGCCTCCATCTTGGGGGCAAACC 302384 36 100.0 40 .................................... ACGATAAGCCCAAAACTGGGGGTCGCCATGAACAACCCAC 302308 36 100.0 36 .................................... GCGCGTTCGTGTTCGCCGTGGTTGCTTTCGTGTTTG 302236 36 100.0 37 .................................... TTACAGCAACTGCCCCCATCGAGTGCGCAGAATTCCG 302163 36 100.0 37 .................................... GCGGTGACGGTGTTGGGCATCATTGTTGCTGGTGGGG 302090 36 97.2 0 ...................................C | ========== ====== ====== ====== ==================================== ======================================== ================== 44 36 99.7 37 GTCGCTGCTCTTTCGGGAGCAGCCTTTCATTGAGGG # Left flank : AGAGAAGACGCACGACGCACGTTGATTTGTTATGACATTATCAGCGACAGGCGAAGGACTAGGACTGCCAATCTTCTGTCTGAGTATGGCGACCGGGTGCAGTACAGTGTGTTCGTAGTCGACATATCTCCAGCACGCTTACTTCAGCTCAAGGATCGACTCAGCTCGATCATTGATAATGAGGAAGATTCCATCCTCTTTTGTGATCTCGGTCGTGTTGCTAAGCTTTCCGAACACAAATTCGGCTATCTCGGCCGTTCTCGGGAGGTGACAGACAATGATGTCTTGATCCTCTAACGGCTATCGCCAGATTCACCTCGATTTCCGAGCGCGCCGGTATCACGCAAAACCCGGGTCACGCTCGTTGCAGCAAAATCTCTGTTCAAACCCGAAAATTCAATAGTGAAGGATGAAGATTAAGCCTCCGAATGCTATCGTCTAACCTAGCGCTCGTTTTGTGTTACAAAAACCCTGTTTATCGCCCTGCTTTTGCAGTGGCA # Right flank : TTTTTCTCTGGTCGGGGATCGGGAGGCCTTCCACCGCGCCCCGCGTGACACTGGAACCAGCCGCCCACGGGCTGAACCGTGGGAGAGTCCCGGAAAAGGGGAGGACGCACGGGTATCGAGAAGCGAAAAGGGGAGGGAGGCGTGGCCTCGGTCGTTGAACAGGGTGTTCATACGTTAAAGGGGGCATCCGCAGGTGGCGTGGGTTCTGCTCGCTAAGCCGACGTGCTTCGTTACAATTTCTAGTTTTGAGCTCCGCCTAGGTTTCGGGTCGTGACCTTTACCTTCTGTGCAGTACAATGCGAGTAACTGGAATAGGGACAGATCTCCCCTCCAAGCTTCTCGTCGGATCAGCGCCACGCGCGAGGGGGGCATTTTACTGTTCCGACTCGGTGGACGCGGGTCTGGTCATTAGCTTTGGCGCACTAGTTTGCTGAAGGAAACTATGCGGTTCTCTCGGGTGCGGCGAAGTTGGTGCCGAAATTTTCGGCACCAAGTTTGGG # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTGCTCTTTCGGGAGCAGCCTTTCATTGAGGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [11,4] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.80,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,1.05 Confidence: MEDIUM] # Array family : NA //