Array 1 67898-69782 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ968751.1 Streptococcus gallolyticus strain DD02 scaffold00008, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 67898 36 100.0 30 .................................... GATGACAACGGAGTGGCTCAATTGTTTTAT 67964 36 100.0 30 .................................... GAATAAGCTAAAACAAGCACTTGAAGCACG 68030 36 100.0 30 .................................... ATTACTCAGAAGCCAACAAGATGATGAGAG 68096 36 100.0 30 .................................... TGGAATAGAGGTGTTAACGCACTTCTTCTT 68162 36 100.0 30 .................................... AAATGATGAGTGGTTAAGAATCCATATTAT 68228 36 100.0 30 .................................... TGGCACACAATATTGTTTTAACGTGCTGGA 68294 36 100.0 30 .................................... TACCGTTCCTAAGTAGTTTGGTGGGTCACT 68360 36 100.0 30 .................................... TGGCAAAAATATATTCTGCTGTGGATTTTA 68426 36 100.0 30 .................................... AGGTCACAGAGTAAAAGAAGATGCTACTTA 68492 36 100.0 30 .................................... ACTAACACTGGTCTTGCCACCGTCAACAGA 68558 36 100.0 30 .................................... TCCAAACATATACACATATGAAACTAAAAA 68624 36 100.0 30 .................................... AACACTCATATTTCTAGGAAGTGCAGCCTT 68690 36 100.0 30 .................................... TTGACCCAACAGGTTCAAGCTATATTAATC 68756 36 100.0 30 .................................... GCTTGTGGTAGATACCTATGCCACGTACTA 68822 36 100.0 30 .................................... GGAAGTTAAAACAATTAAAATCCCAGAATT 68888 36 100.0 30 .................................... AACAAAGTAACTGCTTGTTTCAAATCACCA 68954 36 100.0 30 .................................... CGTATGGGTTAGGTGGCAACCAATAAGATG 69020 36 100.0 30 .................................... ATACCTCAACACCTAAAAAGCGCCTGTCGC 69086 36 100.0 30 .................................... GCTGTTCCAAGTGCTTGAATTCTTCTAATT 69152 36 100.0 30 .................................... GCTGGTCGGTTAGCGAAAAAAACAGGTATG 69218 36 100.0 30 .................................... TTAGAATGATATGTCCTAATTCATGGCATT 69284 36 100.0 31 .................................... AATGTGATGCTAACTATTATAAGTTCAATGG 69351 36 100.0 30 .................................... CATTTAAACCTTCGTTCTTCACACCAACGC 69417 36 100.0 30 .................................... GAGCACTAAAGAAAGTTAAATACCGTTTAT 69483 36 100.0 30 .................................... ACAAAAACCACGAACTGTTTTACGTCAAAA 69549 36 100.0 30 .................................... TTTAAACCAAGGTTTGACACAAGAGCAATT 69615 36 100.0 30 .................................... ATCAGTGCTAGTGATCCATACGTTTGGATA 69681 36 100.0 30 .................................... AGTTCATTTGCATAAGGTTAGGTTTAACAT 69747 36 83.3 0 ............................TT.TGT.T | ========== ====== ====== ====== ==================================== =============================== ================== 29 36 99.4 30 GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC # Left flank : GGATGACTATCTTGATTATTCTTCTTTCATAACTATTTGTAAGACTATTACGCAAATGACTGAGAAATTTCCTAATTTTTATTGCACAATTTTCCCGTCAAATGAAAGTTATTTATACGTTACTAAAGAAACAATTGAACATGTTACCATTGTTTCAGACTTTATTGAATCATTGTTTGACTTGGATTTTATGTATGAAAGATTTATTGGTAGATACCCATCAAATAATATTCCAAGTAAAAGTGAGTTTTTGATATTACTTCAGAAAAATGCAAGTTATCTGTTTAGTGATCAGATTTCATATATTAGTTTAGGAATTCCAGATATGGTAGCCATCAAGATTTTAAATAGTTTATACCATTATGATAAGTCTGTTGTATATCCAATACCTAAGATAGAACCGCTAGAAATAAGCTTTTTAAAGGACAGAGATTGACTTTTTTGCCTAATCAAACTATAATCGGTTTGTAGGATACAAAAACTAAAAATGACGATTTGAG # Right flank : TTTATTATTTAAAATCATTCGAAAGGGATTTTATGACTCCCAAAATTTTCTTTGGTGAGTGGTATGAGGATGAAAAAAACTGATAGCGCTTTCATCGAGGTTACAGGAATCTCTAGTGTTATTGTGGATATGAAAGTATTCCTGATAGCATCAAATCAATGATTTTCACTGCTCAACAAGGTAACGGAGAAGGTTTATACAATTACGTTGAACTTATCAATCCCGCCCCATTTTTGAATAGTAAATTTGCTGACAATTATGAGTTAAACGGGTATAACATTAAATAATTGATTCTTGATGCGTATGCCAAACAAGATATTAAGCACTGAGGGCGCTCAGGGTGTTTTTAGATGAAATCATTTTATAATATTTAACCTTTTTAGCATCTTATGATGCTTTTTTCTTTTCTTGAAATGACTTCTAAAACTTTTTATAGCAACGTTTCTGTTTATCTGTTATAATAGAAATAATGATTAATTGTATAGGATTGTAAGATGGAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTTGTACTCTCAAGATTTAAGTAACCGTAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], //