Array 1 233950-232517 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMLS01000002.1 Bowmanella pacifica strain CGMCC 1.7086 sequence02, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 233949 29 100.0 32 ............................. ACGCGACGAGCGCCGGGAATGGTAAGGGATGC 233888 29 100.0 33 ............................. AAATATAAACTCCTCACGAATAGAATCCCATGC 233826 29 100.0 32 ............................. AGGAATTAGATAAGGCGCTGGACGACAAAAGA 233765 29 100.0 32 ............................. GTTGATGTACTGGCCAAGAACGGTGATATACA 233704 29 100.0 32 ............................. TTGTGCGGATCTTGTGCCATTTGGATCAGTTG 233643 29 100.0 32 ............................. GCGTGTATGTGTTTGATAGCTACTGTTCTAAC 233582 29 100.0 32 ............................. GCTTCATTTTCCTGGGCGCTCATTCTCTTGAC 233521 29 100.0 32 ............................. CCCTGACTGATGAAATGTTTAAGGGGTGATTA 233460 29 100.0 32 ............................. TCATGACAGTTGATTCCTCTCAAGTCGATTTA 233399 29 100.0 32 ............................. GTTGAAGCCGCGGACAAGATGGATGGCTTAAA 233338 29 100.0 32 ............................. GCGGGACATACGCTTACCCGCGCGAAATCATC 233277 29 100.0 32 ............................. GAGACGCGCAACGATAACCAGAGCCACTCCAA 233216 29 100.0 32 ............................. AAATTGCCGGGCGTCTGGCCGCACTTGCGGAG 233155 29 100.0 32 ............................. TATGTGAAACTCTGCTTGTCAGCGAGTCCACT 233094 29 100.0 32 ............................. GAACCCTACATGATTGAACTATCCAATCAGGC 233033 29 100.0 32 ............................. GTGTCGTTGCTGATATAGGGCTGTTTGCCGTT 232972 29 100.0 32 ............................. CCAACGAGCCAGCACCGTACAACACATGATTA 232911 29 100.0 32 ............................. CATGGCCATTACGCTTTTAAACCCAACGCGGC 232850 29 100.0 32 ............................. ATACTAAAGAACAGTTGCGGGAAATCAGCGAC 232789 29 100.0 32 ............................. GGCACAGTGAGTCATCAATCGACGTGGTTAAA 232728 29 100.0 32 ............................. CCGCCTTTGGTGGAAAAGCTACCACCCAAAGA 232667 29 100.0 32 ............................. CGGTAAACCAGCACCCCCCGGAGGTACAGCCG 232606 29 100.0 32 ............................. AGACCAGACGGCAACATTGCGGTTGCCATAGG 232545 29 89.7 0 .............C.........TG.... | ========== ====== ====== ====== ============================= ================================= ================== 24 29 99.6 32 GTGTTCCCCGCAGTCGCGGGGCTAAACCG # Left flank : GATGTATTAGCCGCAGGTGAGATTACTCCCCCTAAACCACCAGAGGATGCCCAGCCGCCAGCAATTCCTGAACCTGAGTCCGTTGGTGATGCAGGCCACAGGAGCAAATAATGGCAATGCTGACCGTTGTAACAGAGAACGTTCCGCCCAGGCTCCGCGGCAGGTTAGCGGTTTGGCTGTTAGAGGTAAGAGCTGGAGTCTATGTCGGCGACGTATCCAGAAAAATTCGAGAAATGATCTGGTATCAAATTACCGAATTAGCCGAACAGGGCAATGTGGTAATGGTCTGGGCCACCAATACCGAATCTGGCTTTGACTTTCAGACGCATGGTGAGAACCGCCGCGTTCCCGTCGATTATGACGGCTTAAGACTGGTGTCGTTTCTACCACCTAAACAAGTCGACAGCTAAGCTCTTTAACAAGCTGGAAATTCAGCCCAAACAGCTGGTAGATTTTCAAAGCATAAAAAAGTGCTTTAAAATCAAATAGCTCCGTTTGGA # Right flank : CCTTGGTCCAGGGTAATTACTCATCGTTTGATGTCTTCCCGACGTTGTGGTGGTCAACTATTTCCAGACACTAGTTTTAAGTCATTCGGCTTTCATTGGTCGCCGTCTCTCCGCGTTAAAAAATAGGTGTTTGGGGCGGCTTTGCCGCCTACGTTAGTGAATACGGCTTCCCGGCGTAGCGGTGAGCTTGCCGCACTGGCGAACAGGACGTTCGCCAGAGGCCGAGAGCTTTGTCAGGGGCGCTGCCTTCGGCCGGTGCGATTAGCGAGCTTGCTGTGGGGCTGGAATCAGAAGCCGTTCTGAGCGTAGGACCTTTTGGCCCCTTTTAGGTCCATCTAAAAGGGGCTGGCTCGCAAGGAGGCGAGTCATACAAAGCATGGAAGCTGATAGATGTAGGTTTTCACATGACCCGTGCCCCGCACAGTGCCTTCGCCGCGCAACTGGCGTTGTTCAACGGCCACTCAGGTAATTTGTACTGAGAAATGCAGTCTTTGCTTAGT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCAGTCGCGGGGCTAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCACCCGCGGGGCTGAACCG with 90% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,5.18 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //